RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ADCYAP1P18509 176 aa8.52□□□□□ -1.05
HDAC6-236ENST00000498808 ERASQ7Z444 233 aa8.52□□□□□ -1.05
HDAC6-236ENST00000498808 NXT2Q9NPJ8 142 aaKnown RBP8.52□□□□□ -1.05
HDAC6-236ENST00000498808 ERG28Q9UKR5 140 aa8.52□□□□□ -1.05
HDAC6-236ENST00000498808 FLGP20930 4061 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-236ENST00000498808 LINC00483Q53H64 154 aa8.51□□□□□ -1.05
HDAC6-236ENST00000498808 SMCR5Q8TEV8 140 aa8.51□□□□□ -1.05
HDAC6-236ENST00000498808 M0R2T5 61 aa8.5□□□□□ -1.05
HDAC6-236ENST00000498808 MOBPQ13875 183 aa8.5□□□□□ -1.05
HDAC6-236ENST00000498808 SCGB3A1Q96QR1 104 aa8.5□□□□□ -1.05
HDAC6-236ENST00000498808 G0S2P27469 103 aa8.49□□□□□ -1.05
HDAC6-236ENST00000498808 CST9LQ9H4G1 147 aa8.49□□□□□ -1.05
HDAC6-236ENST00000498808 IGLV5-39A0A0G2JS06 123 aa8.48□□□□□ -1.05
HDAC6-236ENST00000498808 AKAP14Q86UN6 197 aa8.48□□□□□ -1.05
HDAC6-236ENST00000498808 MRPL18Q9H0U6 180 aaKnown RBP8.48□□□□□ -1.05
HDAC6-236ENST00000498808 IGLV9-49A0A0B4J1Y8 123 aa8.47□□□□□ -1.05
HDAC6-236ENST00000498808 COX17Q14061 63 aa8.47□□□□□ -1.05
HDAC6-236ENST00000498808 SSBP3-AS1Q7Z2R9 100 aa8.47□□□□□ -1.05
HDAC6-236ENST00000498808 ZNF625Q96I27 306 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-236ENST00000498808 H3BRM9 83 aa8.46□□□□□ -1.06
HDAC6-236ENST00000498808 SPRR1AP35321 89 aa8.46□□□□□ -1.06
HDAC6-236ENST00000498808 GAGE2AQ6NT46 116 aa8.46□□□□□ -1.06
HDAC6-236ENST00000498808 KRTAP4-16G5E9R7 235 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-236ENST00000498808 PRYO14603 147 aa8.45□□□□□ -1.06
HDAC6-236ENST00000498808 PMVKQ15126 192 aa8.44□□□□□ -1.06
HDAC6-236ENST00000498808 PEA15Q15121 130 aa8.43□□□□□ -1.06
HDAC6-236ENST00000498808 SSPOA2VEC9 5147 aa8.42□□□□□ -1.06
HDAC6-236ENST00000498808 ERC2-IT1O76042 136 aa8.41□□□□□ -1.06
HDAC6-236ENST00000498808 ZNF22P17026 224 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-236ENST00000498808 KCNQ1DNQ9H478 68 aa8.41□□□□□ -1.06
HDAC6-236ENST00000498808 ETDCA0A1B0GVM5 59 aa8.4□□□□□ -1.06
HDAC6-236ENST00000498808 C9orf92A6NGG3 77 aa8.4□□□□□ -1.06
HDAC6-236ENST00000498808 IGLC3P0DOY3 106 aa8.4□□□□□ -1.06
HDAC6-236ENST00000498808 KIAA1644Q3SXP7 199 aa8.39□□□□□ -1.07
HDAC6-236ENST00000498808 LINC01549A6NIU2 74 aa8.38□□□□□ -1.07
HDAC6-236ENST00000498808 USH2AO75445 5202 aa8.38□□□□□ -1.07
HDAC6-236ENST00000498808 A0A0U1RRA0 63 aa8.37□□□□□ -1.07
HDAC6-236ENST00000498808 LINC01546A6NGU7 62 aa8.37□□□□□ -1.07
HDAC6-236ENST00000498808 NCR3O14931 201 aa8.37□□□□□ -1.07
HDAC6-236ENST00000498808 LINC00158P58513 81 aa8.37□□□□□ -1.07
HDAC6-236ENST00000498808 COX6B2Q6YFQ2 88 aa8.37□□□□□ -1.07
HDAC6-236ENST00000498808 TRBV10-3A0A0K0K1G6 114 aa8.35□□□□□ -1.07
HDAC6-236ENST00000498808 B5MCH6 92 aa8.35□□□□□ -1.07
HDAC6-236ENST00000498808 SFTA2Q6UW10 78 aa8.35□□□□□ -1.07
HDAC6-236ENST00000498808 BOD1L2Q8IYS8 172 aa8.35□□□□□ -1.07
HDAC6-236ENST00000498808 C9orf153Q5TBE3 101 aa8.34□□□□□ -1.07
HDAC6-236ENST00000498808 ANAPC16Q96DE5 110 aa8.34□□□□□ -1.07
HDAC6-236ENST00000498808 Q9BRP9 147 aa8.34□□□□□ -1.07
HDAC6-236ENST00000498808 C11orf86A6NJI1 115 aa8.31□□□□□ -1.08
HDAC6-236ENST00000498808 MT-ND4LP03901 98 aa8.31□□□□□ -1.08
HDAC6-236ENST00000498808 NDUFA6P56556 154 aa8.31□□□□□ -1.08
HDAC6-236ENST00000498808 FCGBPQ9Y6R7 5405 aaPredicted RBP8.3□□□□□ -1.08
HDAC6-236ENST00000498808 IGLV6-57P01721 117 aa8.3□□□□□ -1.08
HDAC6-236ENST00000498808 TRAV9-1A0A075B6T8 112 aa8.29□□□□□ -1.08
HDAC6-236ENST00000498808 SMIM13P0DJ93 91 aa8.29□□□□□ -1.08
HDAC6-236ENST00000498808 TMEM170BQ5T4T1 132 aa8.28□□□□□ -1.08
HDAC6-236ENST00000498808 Q6ZRX8 168 aa8.28□□□□□ -1.08
HDAC6-236ENST00000498808 MIR7-3HGQ8N6C7 128 aa8.28□□□□□ -1.08
HDAC6-236ENST00000498808 A0A096LNJ9 63 aa8.27□□□□□ -1.09
HDAC6-236ENST00000498808 LIMD2Q9BT23 127 aa8.27□□□□□ -1.09
HDAC6-236ENST00000498808 FA2HQ7L5A8 372 aa8.26□□□□□ -1.09
HDAC6-236ENST00000498808 hCG_2014768A0A024R1R8 64 aa8.25□□□□□ -1.09
HDAC6-236ENST00000498808 ATP6V1G1O75348 118 aa8.25□□□□□ -1.09
HDAC6-236ENST00000498808 RPL37P61927 97 aaKnown RBP8.25□□□□□ -1.09
HDAC6-236ENST00000498808 S100A12P80511 92 aa8.25□□□□□ -1.09
HDAC6-236ENST00000498808 HRCT1Q6UXD1 115 aa8.25□□□□□ -1.09
HDAC6-236ENST00000498808 SMCO4Q9NRQ5 59 aa8.25□□□□□ -1.09
HDAC6-236ENST00000498808 ST20-AS1Q8NBB2 130 aa8.24□□□□□ -1.09
HDAC6-236ENST00000498808 DDTP30046 118 aa8.23□□□□□ -1.09
HDAC6-236ENST00000498808 MEIG1Q5JSS6 88 aa8.23□□□□□ -1.09
HDAC6-236ENST00000498808 BAGE3Q86Y29 109 aa8.22□□□□□ -1.09
HDAC6-236ENST00000498808 TMEM223A0PJW6 202 aa8.21□□□□□ -1.1
HDAC6-236ENST00000498808 KRTAP9-8Q9BYQ0 159 aa8.21□□□□□ -1.1
HDAC6-236ENST00000498808 CFC1P0CG37 223 aa8.2□□□□□ -1.1
HDAC6-236ENST00000498808 URB1-AS1Q96HZ7 61 aa8.19□□□□□ -1.1
HDAC6-236ENST00000498808 TRBV10-2A0A0K0K1G8 114 aa8.18□□□□□ -1.1
HDAC6-236ENST00000498808 HBDP02042 147 aa8.17□□□□□ -1.1
HDAC6-236ENST00000498808 HERV-K104P63124 156 aa8.17□□□□□ -1.1
HDAC6-236ENST00000498808 JOSD1Q15040 202 aaPredicted RBP8.17□□□□□ -1.1
HDAC6-236ENST00000498808 PMCHL1Q16048 86 aa8.17□□□□□ -1.1
HDAC6-236ENST00000498808 LOC107984156A0A0G2JMH3 177 aa8.16□□□□□ -1.1
HDAC6-236ENST00000498808 KRTAP19-1Q8IUB9 90 aa8.16□□□□□ -1.1
HDAC6-236ENST00000498808 ARL17AQ8IVW1 177 aa8.16□□□□□ -1.1
HDAC6-236ENST00000498808 CHTOPQ9Y3Y2 248 aaKnown RBP8.16□□□□□ -1.1
HDAC6-236ENST00000498808 SPRR1BP22528 89 aa8.15□□□□□ -1.1
HDAC6-236ENST00000498808 C5orf52A6NGY3 159 aa8.14□□□□□ -1.11
HDAC6-236ENST00000498808 Q6Q795 121 aa8.14□□□□□ -1.11
HDAC6-236ENST00000498808 TRAV23DV6A0A075B6W5 121 aa8.13□□□□□ -1.11
HDAC6-236ENST00000498808 LINC00587B1AMM8 73 aa8.13□□□□□ -1.11
HDAC6-236ENST00000498808 FABP9Q0Z7S8 132 aa8.13□□□□□ -1.11
HDAC6-236ENST00000498808 C1orf195Q5TG92 126 aa8.13□□□□□ -1.11
HDAC6-236ENST00000498808 SPANXB1Q9NS25 103 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-236ENST00000498808 LINC00614P0C842 121 aa8.12□□□□□ -1.11
HDAC6-236ENST00000498808 MAP1LC3CQ9BXW4 147 aa8.12□□□□□ -1.11
HDAC6-236ENST00000498808 H7C2G1 150 aa8.11□□□□□ -1.11
HDAC6-236ENST00000498808 ZNF73O43830 326 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-236ENST00000498808 CD164Q04900 197 aa8.11□□□□□ -1.11
HDAC6-236ENST00000498808 S100A7L2Q5SY68 101 aa8.11□□□□□ -1.11
HDAC6-236ENST00000498808 Q5XG85 94 aa8.1□□□□□ -1.11
HDAC6-236ENST00000498808 C18orf32Q8TCD1 76 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms