RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 COPS9Q8WXC6 57 aa17.37■□□□□ 0.37
HOXB3-212ENST00000498678 Q9HAA7 133 aa17.37■□□□□ 0.37
HOXB3-212ENST00000498678 LINC00526Q96FQ7 95 aa17.36■□□□□ 0.37
HOXB3-212ENST00000498678 FAM240AA0A1B0GVK7 77 aa17.36■□□□□ 0.37
HOXB3-212ENST00000498678 C3orf22Q8N5N4 141 aa17.35■□□□□ 0.37
HOXB3-212ENST00000498678 DYNC2H1Q8NCM8 4307 aaKnown RBP17.33■□□□□ 0.37
HOXB3-212ENST00000498678 UQCRQO14949 82 aa17.33■□□□□ 0.36
HOXB3-212ENST00000498678 C10orf25Q5T742 122 aa17.33■□□□□ 0.36
HOXB3-212ENST00000498678 UNQ6190/PRO20217Q6UXQ8 127 aa17.33■□□□□ 0.36
HOXB3-212ENST00000498678 NTN5Q8WTR8 489 aaPredicted RBP17.32■□□□□ 0.36
HOXB3-212ENST00000498678 C9orf153Q5TBE3 101 aa17.31■□□□□ 0.36
HOXB3-212ENST00000498678 C15orf56Q8N910 161 aa17.31■□□□□ 0.36
HOXB3-212ENST00000498678 UBE2DNLQ8IWF7 75 aa17.3■□□□□ 0.36
HOXB3-212ENST00000498678 C9orf116Q5BN46 136 aaPredicted RBP17.3■□□□□ 0.36
HOXB3-212ENST00000498678 COX17Q14061 63 aa17.29■□□□□ 0.36
HOXB3-212ENST00000498678 CSMD3Q7Z407 3707 aa17.29■□□□□ 0.36
HOXB3-212ENST00000498678 HIGD2BQ4VC39 106 aa17.29■□□□□ 0.36
HOXB3-212ENST00000498678 LOC107984640A0A0U1RRK4 108 aa17.28■□□□□ 0.36
HOXB3-212ENST00000498678 ZNF561-AS1K7EIQ3 104 aa17.27■□□□□ 0.36
HOXB3-212ENST00000498678 ATXN8Q156A1 80 aa17.25■□□□□ 0.35
HOXB3-212ENST00000498678 H7C2G1 150 aa17.25■□□□□ 0.35
HOXB3-212ENST00000498678 TRBV10-2A0A0K0K1G8 114 aa17.24■□□□□ 0.35
HOXB3-212ENST00000498678 RMI2Q96E14 147 aa17.24■□□□□ 0.35
HOXB3-212ENST00000498678 SND1-IT1Q9HBX3 110 aa17.24■□□□□ 0.35
HOXB3-212ENST00000498678 GVQW2A0A096LPI5 108 aaPredicted RBP17.23■□□□□ 0.35
HOXB3-212ENST00000498678 KRTAP1-5Q9BYS1 174 aa17.23■□□□□ 0.35
HOXB3-212ENST00000498678 C6orf48Q9UBA6 75 aa17.22■□□□□ 0.35
HOXB3-212ENST00000498678 LINC01620Q4KN68 170 aa17.22■□□□□ 0.35
HOXB3-212ENST00000498678 CASC10Q5T4H9 136 aa17.21■□□□□ 0.35
HOXB3-212ENST00000498678 CAMK2N2Q96S95 79 aa17.21■□□□□ 0.35
HOXB3-212ENST00000498678 DNAH7Q8WXX0 4024 aa17.21■□□□□ 0.35
HOXB3-212ENST00000498678 C2orf48Q96LS8 159 aa17.21■□□□□ 0.34
HOXB3-212ENST00000498678 LYSTQ99698 3801 aa17.2■□□□□ 0.34
HOXB3-212ENST00000498678 DNAH1Q9P2D7 4330 aa17.2■□□□□ 0.34
HOXB3-212ENST00000498678 Q1RN00 199 aa17.19■□□□□ 0.34
HOXB3-212ENST00000498678 IGKV2-28A0A075B6P5 120 aa17.18■□□□□ 0.34
HOXB3-212ENST00000498678 IGKV2D-28P01615 120 aa17.18■□□□□ 0.34
HOXB3-212ENST00000498678 ACYP1P07311 99 aa17.18■□□□□ 0.34
HOXB3-212ENST00000498678 FBN3Q75N90 2809 aa17.18■□□□□ 0.34
HOXB3-212ENST00000498678 TRBV30A0A0K0K1B3 111 aa17.17■□□□□ 0.34
HOXB3-212ENST00000498678 TEX49A0A1B0GTD5 131 aa17.17■□□□□ 0.34
HOXB3-212ENST00000498678 Q6ZRU5 148 aa17.17■□□□□ 0.34
HOXB3-212ENST00000498678 CRYGAP11844 174 aa17.16■□□□□ 0.34
HOXB3-212ENST00000498678 H3BT86 120 aa17.16■□□□□ 0.34
HOXB3-212ENST00000498678 MUC7Q8TAX7 377 aa17.16■□□□□ 0.34
HOXB3-212ENST00000498678 PLECQ15149 4684 aaKnown RBP17.16■□□□□ 0.34
HOXB3-212ENST00000498678 FAM236AA0A1B0GUQ0 79 aa17.15■□□□□ 0.34
HOXB3-212ENST00000498678 FAM236BA0A1B0GV22 79 aa17.15■□□□□ 0.34
HOXB3-212ENST00000498678 F8WDY8 70 aa17.15■□□□□ 0.34
HOXB3-212ENST00000498678 USP17L23D6RBM5 183 aa17.14■□□□□ 0.33
HOXB3-212ENST00000498678 GAGE2AQ6NT46 116 aa17.13■□□□□ 0.33
HOXB3-212ENST00000498678 LINC00337Q8N6G1 96 aa17.13■□□□□ 0.33
HOXB3-212ENST00000498678 STARD9Q9P2P6 4700 aa17.13■□□□□ 0.33
HOXB3-212ENST00000498678 TRIAP1O43715 76 aa17.12■□□□□ 0.33
HOXB3-212ENST00000498678 COX7CP15954 63 aa17.12■□□□□ 0.33
HOXB3-212ENST00000498678 TRAV13-2A0A0B4J235 113 aa17.12■□□□□ 0.33
HOXB3-212ENST00000498678 TENM2Q9NT68 2774 aa17.11■□□□□ 0.33
HOXB3-212ENST00000498678 SYCNQ0VAF6 134 aa17.1■□□□□ 0.33
HOXB3-212ENST00000498678 NDUFC2O95298 119 aa17.08■□□□□ 0.32
HOXB3-212ENST00000498678 NBDYA0A0U1RRE5 68 aa17.07■□□□□ 0.32
HOXB3-212ENST00000498678 LECT2O14960 151 aa17.06■□□□□ 0.32
HOXB3-212ENST00000498678 Q8NDZ9 215 aa17.06■□□□□ 0.32
HOXB3-212ENST00000498678 SLPIP03973 132 aa17.06■□□□□ 0.32
HOXB3-212ENST00000498678 PRR3P79522 188 aaKnown RBP17.06■□□□□ 0.32
HOXB3-212ENST00000498678 TMEM258P61165 79 aa17.05■□□□□ 0.32
HOXB3-212ENST00000498678 LINC00643Q86TS7 51 aa17.05■□□□□ 0.32
HOXB3-212ENST00000498678 NDUFC2-KCTD14E9PQ53 114 aa17.03■□□□□ 0.32
HOXB3-212ENST00000498678 TRACP01848 142 aa17.02■□□□□ 0.32
HOXB3-212ENST00000498678 COX6CP09669 75 aa17.02■□□□□ 0.32
HOXB3-212ENST00000498678 DPH3Q96FX2 82 aa17.02■□□□□ 0.32
HOXB3-212ENST00000498678 XAGE1AQ9HD64 81 aa17.02■□□□□ 0.32
HOXB3-212ENST00000498678 PSCAO43653 123 aa17.01■□□□□ 0.31
HOXB3-212ENST00000498678 RPL28P46779 137 aaKnown RBP16.98■□□□□ 0.31
HOXB3-212ENST00000498678 Q6ZRP5 223 aa16.98■□□□□ 0.31
HOXB3-212ENST00000498678 SMIM11BQ8TCY0 68 aa16.98■□□□□ 0.31
HOXB3-212ENST00000498678 ATOX1O00244 68 aa16.97■□□□□ 0.31
HOXB3-212ENST00000498678 NCR3O14931 201 aa16.96■□□□□ 0.31
HOXB3-212ENST00000498678 SDIM1Q6ZPB5 146 aa16.96■□□□□ 0.31
HOXB3-212ENST00000498678 CLEC2BQ92478 149 aa16.95■□□□□ 0.3
HOXB3-212ENST00000498678 WWC2-AS2Q96NR7 200 aa16.95■□□□□ 0.3
HOXB3-212ENST00000498678 VPS13DQ5THJ4 4388 aa16.94■□□□□ 0.3
HOXB3-212ENST00000498678 TLX1NBP0CAT3 122 aa16.94■□□□□ 0.3
HOXB3-212ENST00000498678 M0R2N4 97 aa16.92■□□□□ 0.3
HOXB3-212ENST00000498678 HIST1H4AP62805 103 aaKnown RBP16.92■□□□□ 0.3
HOXB3-212ENST00000498678 Q6ZRN7 208 aaPredicted RBP16.92■□□□□ 0.3
HOXB3-212ENST00000498678 Q5XG85 94 aa16.91■□□□□ 0.3
HOXB3-212ENST00000498678 DNAH10Q8IVF4 4471 aa16.91■□□□□ 0.3
HOXB3-212ENST00000498678 TGP01266 2768 aa16.9■□□□□ 0.3
HOXB3-212ENST00000498678 LST1O00453 97 aa16.9■□□□□ 0.3
HOXB3-212ENST00000498678 PRO0628Q9UI54 55 aa16.9■□□□□ 0.3
HOXB3-212ENST00000498678 RPL18AQ02543 176 aaKnown RBP16.89■□□□□ 0.3
HOXB3-212ENST00000498678 VPREB1P12018 145 aa16.89■□□□□ 0.29
HOXB3-212ENST00000498678 C4orf26Q17RF5 130 aa16.89■□□□□ 0.29
HOXB3-212ENST00000498678 C9orf129Q5T035 196 aaKnown RBP16.89■□□□□ 0.29
HOXB3-212ENST00000498678 S100A7L2Q5SY68 101 aa16.88■□□□□ 0.29
HOXB3-212ENST00000498678 LRCOL1A6NCL2 159 aa16.87■□□□□ 0.29
HOXB3-212ENST00000498678 HRCT1Q6UXD1 115 aa16.87■□□□□ 0.29
HOXB3-212ENST00000498678 C14orf177Q52M58 125 aa16.86■□□□□ 0.29
HOXB3-212ENST00000498678 hADV29S1A0JD25 119 aa16.85■□□□□ 0.29
HOXB3-212ENST00000498678 CNBPP62633 177 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms