RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 ERG28Q9UKR5 140 aa13.87□□□□□ -0.19
CDKN2A-208ENST00000498124 J3QQQ9 107 aa13.86□□□□□ -0.19
CDKN2A-208ENST00000498124 HERV-K104P63124 156 aa13.86□□□□□ -0.19
CDKN2A-208ENST00000498124 COX17Q14061 63 aa13.86□□□□□ -0.19
CDKN2A-208ENST00000498124 MYMXA0A1B0GTQ4 84 aa13.85□□□□□ -0.19
CDKN2A-208ENST00000498124 E9PLD3 99 aa13.85□□□□□ -0.19
CDKN2A-208ENST00000498124 LGALS3P17931 250 aaKnown RBP13.85□□□□□ -0.19
CDKN2A-208ENST00000498124 PFN2P35080 140 aa13.85□□□□□ -0.19
CDKN2A-208ENST00000498124 TSPEAR-AS2P59090 65 aa13.84□□□□□ -0.19
CDKN2A-208ENST00000498124 C9orf129Q5T035 196 aaKnown RBP13.84□□□□□ -0.19
CDKN2A-208ENST00000498124 PSORS1C2Q9UIG4 136 aa13.84□□□□□ -0.19
CDKN2A-208ENST00000498124 NMUP48645 174 aa13.83□□□□□ -0.2
CDKN2A-208ENST00000498124 XAGE1AQ9HD64 81 aa13.83□□□□□ -0.2
CDKN2A-208ENST00000498124 LINC00587B1AMM8 73 aa13.82□□□□□ -0.2
CDKN2A-208ENST00000498124 PHF5AQ7RTV0 110 aaKnown RBP13.82□□□□□ -0.2
CDKN2A-208ENST00000498124 FAM168BA1KXE4 195 aa13.8□□□□□ -0.2
CDKN2A-208ENST00000498124 MEIG1Q5JSS6 88 aa13.8□□□□□ -0.2
CDKN2A-208ENST00000498124 LINC00158P58513 81 aa13.79□□□□□ -0.2
CDKN2A-208ENST00000498124 FAM19A5Q7Z5A7 132 aaPredicted RBP13.79□□□□□ -0.2
CDKN2A-208ENST00000498124 ATOH7Q8N100 152 aa13.77□□□□□ -0.21
CDKN2A-208ENST00000498124 SMIM13P0DJ93 91 aa13.76□□□□□ -0.21
CDKN2A-208ENST00000498124 KRTAP11-1Q8IUC1 163 aa13.76□□□□□ -0.21
CDKN2A-208ENST00000498124 SND1-IT1Q9HBX3 110 aa13.76□□□□□ -0.21
CDKN2A-208ENST00000498124 C1orf137Q5JT78 98 aa13.75□□□□□ -0.21
CDKN2A-208ENST00000498124 A0A0U1RRA0 63 aa13.74□□□□□ -0.21
CDKN2A-208ENST00000498124 M0QXV9 152 aa13.74□□□□□ -0.21
CDKN2A-208ENST00000498124 KRTAP7-1Q8IUC3 87 aa13.74□□□□□ -0.21
CDKN2A-208ENST00000498124 TMA7Q9Y2S6 64 aaKnown RBP13.74□□□□□ -0.21
CDKN2A-208ENST00000498124 LPAP08519 4548 aa13.72□□□□□ -0.21
CDKN2A-208ENST00000498124 IGKV2D-26A0A0A0MRZ7 120 aa13.72□□□□□ -0.21
CDKN2A-208ENST00000498124 SCGB1D1O95968 90 aa13.72□□□□□ -0.21
CDKN2A-208ENST00000498124 ANKRD39Q53RE8 183 aa13.71□□□□□ -0.21
CDKN2A-208ENST00000498124 MIR7-3HGQ8N6C7 128 aa13.71□□□□□ -0.21
CDKN2A-208ENST00000498124 C22orf24Q9Y442 160 aa13.71□□□□□ -0.21
CDKN2A-208ENST00000498124 HSBP1L1C9JCN9 74 aa13.7□□□□□ -0.22
CDKN2A-208ENST00000498124 IGLV7-43P04211 117 aa13.7□□□□□ -0.22
CDKN2A-208ENST00000498124 LBHQ53QV2 105 aaPredicted RBP13.7□□□□□ -0.22
CDKN2A-208ENST00000498124 TP73-AS1Q9UF72 201 aa13.7□□□□□ -0.22
CDKN2A-208ENST00000498124 A0A0J9YXY3 114 aa13.69□□□□□ -0.22
CDKN2A-208ENST00000498124 ZNF815PA8K554 130 aa13.69□□□□□ -0.22
CDKN2A-208ENST00000498124 IGLV5-37A0A075B6J1 123 aa13.68□□□□□ -0.22
CDKN2A-208ENST00000498124 RPL24P83731 157 aaKnown RBP13.68□□□□□ -0.22
CDKN2A-208ENST00000498124 NKAPP1Q8N9T2 125 aa13.68□□□□□ -0.22
CDKN2A-208ENST00000498124 UBE2BP63146 152 aa13.67□□□□□ -0.22
CDKN2A-208ENST00000498124 MRPL55Q7Z7F7 128 aaKnown RBP13.66□□□□□ -0.22
CDKN2A-208ENST00000498124 TTTY13Q9BZ97 58 aa13.65□□□□□ -0.22
CDKN2A-208ENST00000498124 VPREB1P12018 145 aa13.64□□□□□ -0.23
CDKN2A-208ENST00000498124 DIRC1Q969H9 104 aa13.64□□□□□ -0.23
CDKN2A-208ENST00000498124 H0Y9J4 135 aa13.63□□□□□ -0.23
CDKN2A-208ENST00000498124 TIMM17BO60830 172 aa13.63□□□□□ -0.23
CDKN2A-208ENST00000498124 BOD1L2Q8IYS8 172 aa13.63□□□□□ -0.23
CDKN2A-208ENST00000498124 PRR26Q8N8Z3 221 aa13.63□□□□□ -0.23
CDKN2A-208ENST00000498124 DAND5Q8N907 189 aa13.63□□□□□ -0.23
CDKN2A-208ENST00000498124 MIEN1Q9BRT3 115 aa13.61□□□□□ -0.23
CDKN2A-208ENST00000498124 LOC107984156A0A0G2JMH3 177 aa13.6□□□□□ -0.23
CDKN2A-208ENST00000498124 KRTAP1-4P0C5Y4 121 aa13.6□□□□□ -0.23
CDKN2A-208ENST00000498124 JOSD1Q15040 202 aaPredicted RBP13.6□□□□□ -0.23
CDKN2A-208ENST00000498124 SCGB1D4Q6XE38 83 aa13.6□□□□□ -0.23
CDKN2A-208ENST00000498124 PCP2Q8IVA1 136 aa13.6□□□□□ -0.23
CDKN2A-208ENST00000498124 ARL17AQ8IVW1 177 aa13.6□□□□□ -0.23
CDKN2A-208ENST00000498124 LINC00167Q96N53 147 aa13.6□□□□□ -0.23
CDKN2A-208ENST00000498124 ADAMTSL4-AS1Q5T5F5 129 aa13.59□□□□□ -0.23
CDKN2A-208ENST00000498124 GAGE10A6NGK3 116 aa13.58□□□□□ -0.24
CDKN2A-208ENST00000498124 Q8NDZ9 215 aa13.58□□□□□ -0.24
CDKN2A-208ENST00000498124 LITAFQ99732 161 aa13.58□□□□□ -0.24
CDKN2A-208ENST00000498124 TMEM238C9JI98 176 aa13.56□□□□□ -0.24
CDKN2A-208ENST00000498124 RPL37AP8A6NKH3 93 aa13.55□□□□□ -0.24
CDKN2A-208ENST00000498124 M0R378 163 aa13.55□□□□□ -0.24
CDKN2A-208ENST00000498124 IGLV1-50A0A075B6I6 118 aa13.52□□□□□ -0.25
CDKN2A-208ENST00000498124 NPC2P61916 151 aa13.52□□□□□ -0.25
CDKN2A-208ENST00000498124 SOSTDC1Q6X4U4 206 aa13.52□□□□□ -0.25
CDKN2A-208ENST00000498124 LINC00308Q8TCZ7 52 aa13.52□□□□□ -0.25
CDKN2A-208ENST00000498124 NCR3O14931 201 aa13.51□□□□□ -0.25
CDKN2A-208ENST00000498124 NDUFC2O95298 119 aa13.51□□□□□ -0.25
CDKN2A-208ENST00000498124 VAMP8Q9BV40 100 aa13.51□□□□□ -0.25
CDKN2A-208ENST00000498124 SPANXDQ9BXN6 97 aa13.51□□□□□ -0.25
CDKN2A-208ENST00000498124 SPANXCQ9NY87 97 aa13.51□□□□□ -0.25
CDKN2A-208ENST00000498124 IGKV2-28A0A075B6P5 120 aa13.5□□□□□ -0.25
CDKN2A-208ENST00000498124 IGKV2D-28P01615 120 aa13.5□□□□□ -0.25
CDKN2A-208ENST00000498124 Q6ZVH6 145 aa13.5□□□□□ -0.25
CDKN2A-208ENST00000498124 COPS9Q8WXC6 57 aa13.5□□□□□ -0.25
CDKN2A-208ENST00000498124 SPANXB1Q9NS25 103 aaPredicted RBP13.5□□□□□ -0.25
CDKN2A-208ENST00000498124 TRBV10-2A0A0K0K1G8 114 aa13.49□□□□□ -0.25
CDKN2A-208ENST00000498124 PAM16Q9Y3D7 125 aa13.49□□□□□ -0.25
CDKN2A-208ENST00000498124 EIF4EBP3O60516 100 aaPredicted RBP13.48□□□□□ -0.25
CDKN2A-208ENST00000498124 COX8AP10176 69 aa13.48□□□□□ -0.25
CDKN2A-208ENST00000498124 SPATA45Q537H7 98 aa13.48□□□□□ -0.25
CDKN2A-208ENST00000498124 PYY3Q5JQD4 70 aa13.48□□□□□ -0.25
CDKN2A-208ENST00000498124 BCE1O60756 84 aa13.47□□□□□ -0.25
CDKN2A-208ENST00000498124 IFITM1P13164 125 aa13.47□□□□□ -0.25
CDKN2A-208ENST00000498124 PPDPFQ9H3Y8 114 aa13.45□□□□□ -0.26
CDKN2A-208ENST00000498124 DLEU1O43261 78 aa13.44□□□□□ -0.26
CDKN2A-208ENST00000498124 ZNF861PO60384 105 aa13.44□□□□□ -0.26
CDKN2A-208ENST00000498124 S100A12P80511 92 aa13.43□□□□□ -0.26
CDKN2A-208ENST00000498124 TMEM126AQ9H061 195 aa13.43□□□□□ -0.26
CDKN2A-208ENST00000498124 TRBV10-3A0A0K0K1G6 114 aa13.42□□□□□ -0.26
CDKN2A-208ENST00000498124 PRYO14603 147 aa13.41□□□□□ -0.26
CDKN2A-208ENST00000498124 DDTP30046 118 aa13.41□□□□□ -0.26
CDKN2A-208ENST00000498124 RPL13AP40429 203 aaKnown RBP13.41□□□□□ -0.26
CDKN2A-208ENST00000498124 RPL28P46779 137 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms