RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 RNF17Q9BXT8 1623 aaKnown RBP-0.82□□□□□ -2.54
SMC4-227ENST00000497984 PSME4Q14997 1843 aa-0.82□□□□□ -2.54
SMC4-227ENST00000497984 SETBP1Q9Y6X0 1596 aa-0.82□□□□□ -2.54
SMC4-227ENST00000497984 A8MTW9 85 aa-0.82□□□□□ -2.54
SMC4-227ENST00000497984 ANP32BQ92688 251 aaKnown RBP-0.82□□□□□ -2.54
SMC4-227ENST00000497984 AQP10Q96PS8 301 aa-0.82□□□□□ -2.54
SMC4-227ENST00000497984 TMEM191AQ9H0A3 160 aa-0.82□□□□□ -2.54
SMC4-227ENST00000497984 FXYD6Q9H0Q3 95 aa-0.82□□□□□ -2.54
SMC4-227ENST00000497984 LENEPQ9Y5L5 61 aa-0.82□□□□□ -2.54
SMC4-227ENST00000497984 V9GYH0 126 aa-0.82□□□□□ -2.54
SMC4-227ENST00000497984 WNK3Q9BYP7 1800 aa-0.82□□□□□ -2.54
SMC4-227ENST00000497984 MAP3K1Q13233 1512 aa-0.83□□□□□ -2.54
SMC4-227ENST00000497984 CLASP1Q7Z460 1538 aa-0.83□□□□□ -2.54
SMC4-227ENST00000497984 PKD1L3Q7Z443 1732 aa-0.83□□□□□ -2.54
SMC4-227ENST00000497984 HIST1H1DP16402 221 aaKnown RBP-0.83□□□□□ -2.54
SMC4-227ENST00000497984 SMIM21Q3B7S5 101 aa-0.83□□□□□ -2.54
SMC4-227ENST00000497984 TMEM170BQ5T4T1 132 aa-0.83□□□□□ -2.54
SMC4-227ENST00000497984 Q6JHZ5 121 aa-0.83□□□□□ -2.54
SMC4-227ENST00000497984 TTC9CQ8N5M4 171 aa-0.83□□□□□ -2.54
SMC4-227ENST00000497984 MAFIPQ8WZ33 124 aa-0.83□□□□□ -2.54
SMC4-227ENST00000497984 TCEAL4Q96EI5 215 aa-0.83□□□□□ -2.54
SMC4-227ENST00000497984 SBF2Q86WG5 1849 aa-0.83□□□□□ -2.54
SMC4-227ENST00000497984 TMEM131LA2VDJ0 1609 aa-0.83□□□□□ -2.54
SMC4-227ENST00000497984 USP32Q8NFA0 1604 aa-0.83□□□□□ -2.54
SMC4-227ENST00000497984 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.83□□□□□ -2.54
SMC4-227ENST00000497984 NRAPQ86VF7 1730 aa-0.84□□□□□ -2.54
SMC4-227ENST00000497984 ARAP2Q8WZ64 1704 aa-0.84□□□□□ -2.54
SMC4-227ENST00000497984 RAPGEF2Q9Y4G8 1499 aa-0.84□□□□□ -2.54
SMC4-227ENST00000497984 MYH9P35579 1960 aaKnown RBP-0.84□□□□□ -2.54
SMC4-227ENST00000497984 PIK3C2BO00750 1634 aa-0.84□□□□□ -2.54
SMC4-227ENST00000497984 SHROOM2Q13796 1616 aa-0.84□□□□□ -2.54
SMC4-227ENST00000497984 LINC01546A6NGU7 62 aa-0.84□□□□□ -2.54
SMC4-227ENST00000497984 COX17Q14061 63 aa-0.84□□□□□ -2.54
SMC4-227ENST00000497984 SMCO1Q147U7 214 aa-0.84□□□□□ -2.54
SMC4-227ENST00000497984 Q8N8P6 123 aa-0.84□□□□□ -2.54
SMC4-227ENST00000497984 C4AP0C0L4 1744 aa-0.84□□□□□ -2.54
SMC4-227ENST00000497984 C4BP0C0L5 1744 aa-0.84□□□□□ -2.54
SMC4-227ENST00000497984 BTAF1O14981 1849 aa-0.85□□□□□ -2.54
SMC4-227ENST00000497984 PARP14Q460N5 1801 aa-0.85□□□□□ -2.54
SMC4-227ENST00000497984 GRIN2AQ12879 1464 aa-0.85□□□□□ -2.55
SMC4-227ENST00000497984 H0YGG7 62 aa-0.85□□□□□ -2.55
SMC4-227ENST00000497984 UBR1Q8IWV7 1749 aa-0.85□□□□□ -2.55
SMC4-227ENST00000497984 LSM10Q969L4 123 aaKnown RBP-0.85□□□□□ -2.55
SMC4-227ENST00000497984 PRO3102Q9H379 93 aa-0.85□□□□□ -2.55
SMC4-227ENST00000497984 PLCH1Q4KWH8 1693 aa-0.85□□□□□ -2.55
SMC4-227ENST00000497984 LMO7Q8WWI1 1683 aa-0.85□□□□□ -2.55
SMC4-227ENST00000497984 POLR1AO95602 1720 aaPredicted RBP-0.86□□□□□ -2.55
SMC4-227ENST00000497984 DOT1LQ8TEK3 1739 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 EEA1Q15075 1411 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 MYOM3Q5VTT5 1437 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 F8WEM9 126 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 TNP1P09430 55 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 H1FX-AS1Q4G0G2 97 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 Q6AWC8 147 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 BAGE2Q86Y30 109 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 C9orf62Q8N4C0 152 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 DEFB105AQ8NG35 78 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 LEAP2Q969E1 77 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 PDCD10Q9BUL8 212 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 NDUFA4L2Q9NRX3 87 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 CCDC167Q9P0B6 97 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 KDM3BQ7LBC6 1761 aa-0.86□□□□□ -2.55
SMC4-227ENST00000497984 GLI2P10070 1586 aa-0.87□□□□□ -2.55
SMC4-227ENST00000497984 MYH7P12883 1935 aa-0.87□□□□□ -2.55
SMC4-227ENST00000497984 TRPM2O94759 1503 aa-0.87□□□□□ -2.55
SMC4-227ENST00000497984 DUOX2Q9NRD8 1548 aa-0.87□□□□□ -2.55
SMC4-227ENST00000497984 M0QZ58 72 aa-0.87□□□□□ -2.55
SMC4-227ENST00000497984 CCL22O00626 93 aa-0.87□□□□□ -2.55
SMC4-227ENST00000497984 KIAA0556O60303 1618 aa-0.87□□□□□ -2.55
SMC4-227ENST00000497984 LRRC37A2A6NM11 1700 aa-0.87□□□□□ -2.55
SMC4-227ENST00000497984 TEX14Q8IWB6 1497 aa-0.87□□□□□ -2.55
SMC4-227ENST00000497984 SHANK2Q9UPX8 1470 aa-0.87□□□□□ -2.55
SMC4-227ENST00000497984 EIF4G3O43432 1585 aaKnown RBP-0.87□□□□□ -2.55
SMC4-227ENST00000497984 TOPAZ1Q8N9V7 1692 aa-0.88□□□□□ -2.55
SMC4-227ENST00000497984 CUX1P39880 1505 aa-0.88□□□□□ -2.55
SMC4-227ENST00000497984 TOGARAM1Q9Y4F4 1720 aa-0.88□□□□□ -2.55
SMC4-227ENST00000497984 F8VRH5 84 aa-0.88□□□□□ -2.55
SMC4-227ENST00000497984 UQCR11O14957 56 aa-0.88□□□□□ -2.55
SMC4-227ENST00000497984 UBE2D4Q9Y2X8 147 aa-0.88□□□□□ -2.55
SMC4-227ENST00000497984 ABCC10Q5T3U5 1492 aa-0.88□□□□□ -2.55
SMC4-227ENST00000497984 MAGI1Q96QZ7 1491 aaPredicted RBP-0.88□□□□□ -2.55
SMC4-227ENST00000497984 MLH3Q9UHC1 1453 aa-0.88□□□□□ -2.55
SMC4-227ENST00000497984 NRXN1Q9ULB1 1477 aa-0.88□□□□□ -2.55
SMC4-227ENST00000497984 A0A1B0GUL6 1792 aa-0.88□□□□□ -2.55
SMC4-227ENST00000497984 VPS8Q8N3P4 1428 aa-0.89□□□□□ -2.55
SMC4-227ENST00000497984 ZFYVE16Q7Z3T8 1539 aa-0.89□□□□□ -2.55
SMC4-227ENST00000497984 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.89□□□□□ -2.558e-10■■■■□ 19.5
SMC4-227ENST00000497984 ITSN1Q15811 1721 aa-0.89□□□□□ -2.55
SMC4-227ENST00000497984 MMP24-AS1A0A0U1RRL7 71 aa-0.89□□□□□ -2.55
SMC4-227ENST00000497984 LOC105371267A0A1B0GV96 52 aa-0.89□□□□□ -2.55
SMC4-227ENST00000497984 C12orf73Q69YU5 71 aa-0.89□□□□□ -2.55
SMC4-227ENST00000497984 TSLPQ969D9 159 aa-0.89□□□□□ -2.55
SMC4-227ENST00000497984 SPRR4Q96PI1 79 aa-0.89□□□□□ -2.55
SMC4-227ENST00000497984 ROBO1Q9Y6N7 1651 aa-0.89□□□□□ -2.55
SMC4-227ENST00000497984 RGPD3A6NKT7 1758 aaPredicted RBP-0.89□□□□□ -2.55
SMC4-227ENST00000497984 RGPD2P0DJD1 1756 aa-0.89□□□□□ -2.55
SMC4-227ENST00000497984 LY75O60449 1722 aa-0.89□□□□□ -2.55
SMC4-227ENST00000497984 SUPT6HQ7KZ85 1726 aaKnown RBP-0.89□□□□□ -2.55
SMC4-227ENST00000497984 MADDQ8WXG6 1647 aa-0.89□□□□□ -2.55
SMC4-227ENST00000497984 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.89□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms