RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 RNASE3P12724 160 aaKnown RBP3.06□□□□□ -1.92
BRCA1-224ENST00000497488 CBLN1P23435 193 aa3.06□□□□□ -1.92
BRCA1-224ENST00000497488 UBE2G1P62253 170 aa3.06□□□□□ -1.92
BRCA1-224ENST00000497488 HMGN3Q15651 99 aa3.06□□□□□ -1.92
BRCA1-224ENST00000497488 FAM74A1Q5RGS3 127 aa3.06□□□□□ -1.92
BRCA1-224ENST00000497488 UNQ5815/PRO19632Q6UWF5 114 aa3.06□□□□□ -1.92
BRCA1-224ENST00000497488 C10orf99Q6UWK7 81 aa3.06□□□□□ -1.92
BRCA1-224ENST00000497488 C5orf38Q86SI9 138 aa3.06□□□□□ -1.92
BRCA1-224ENST00000497488 SBSPONQ8IVN8 264 aa3.06□□□□□ -1.92
BRCA1-224ENST00000497488 DPH3P1Q9H4G8 78 aa3.06□□□□□ -1.92
BRCA1-224ENST00000497488 H3BRM9 83 aa3.05□□□□□ -1.92
BRCA1-224ENST00000497488 MRPS14O60783 128 aaKnown RBP3.05□□□□□ -1.92
BRCA1-224ENST00000497488 RBM3P98179 157 aaKnown RBP3.05□□□□□ -1.92
BRCA1-224ENST00000497488 C9orf116Q5BN46 136 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-224ENST00000497488 CSAG1Q6PB30 78 aa3.05□□□□□ -1.92
BRCA1-224ENST00000497488 LYPD5Q6UWN5 251 aa3.05□□□□□ -1.92
BRCA1-224ENST00000497488 C9orf62Q8N4C0 152 aa3.05□□□□□ -1.92
BRCA1-224ENST00000497488 ARHGAP5-AS1Q96IT6 56 aa3.05□□□□□ -1.92
BRCA1-224ENST00000497488 Q9H521 79 aa3.05□□□□□ -1.92
BRCA1-224ENST00000497488 CMYA5Q8N3K9 4069 aa3.04□□□□□ -1.92
BRCA1-224ENST00000497488 TRAV1-2A0A0B4J238 106 aa3.04□□□□□ -1.92
BRCA1-224ENST00000497488 PIGBOS1A0A0B4J2F0 54 aa3.04□□□□□ -1.92
BRCA1-224ENST00000497488 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
BRCA1-224ENST00000497488 ZNF137PP52743 207 aa3.04□□□□□ -1.92
BRCA1-224ENST00000497488 RPL7L1Q6DKI1 246 aaKnown RBP3.04□□□□□ -1.92
BRCA1-224ENST00000497488 Q8N6K4 173 aa3.04□□□□□ -1.92
BRCA1-224ENST00000497488 C5orf56Q8N8D9 126 aa3.04□□□□□ -1.92
BRCA1-224ENST00000497488 TRRAPQ9Y4A5 3859 aa3.04□□□□□ -1.92
BRCA1-224ENST00000497488 TRBV6-4A0A1B0GX49 114 aa3.03□□□□□ -1.92
BRCA1-224ENST00000497488 RBAKDNA6NC62 111 aa3.03□□□□□ -1.92
BRCA1-224ENST00000497488 PDCD5O14737 125 aa3.03□□□□□ -1.92
BRCA1-224ENST00000497488 SAA2P0DJI9 122 aaPredicted RBP3.03□□□□□ -1.92
BRCA1-224ENST00000497488 RPL39P5Q59GN2 51 aa3.03□□□□□ -1.92
BRCA1-224ENST00000497488 A0A087WXM4 84 aa3.02□□□□□ -1.93
BRCA1-224ENST00000497488 A0A0J9YY99 117 aa3.02□□□□□ -1.93
BRCA1-224ENST00000497488 UBE2L5PA0A1B0GUS4 154 aa3.02□□□□□ -1.93
BRCA1-224ENST00000497488 NUPR1O60356 82 aa3.02□□□□□ -1.93
BRCA1-224ENST00000497488 ATP5EP56381 51 aaPredicted RBP3.02□□□□□ -1.93
BRCA1-224ENST00000497488 UBE2L3P68036 154 aaKnown RBP3.02□□□□□ -1.93
BRCA1-224ENST00000497488 IQCJQ1A5X6 159 aa3.02□□□□□ -1.93
BRCA1-224ENST00000497488 COA5Q86WW8 74 aa3.02□□□□□ -1.93
BRCA1-224ENST00000497488 ATG5Q9H1Y0 275 aa3.02□□□□□ -1.93
BRCA1-224ENST00000497488 ABRACLQ9P1F3 81 aa3.02□□□□□ -1.93
BRCA1-224ENST00000497488 VWFP04275 2813 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 MEGF8Q7Z7M0 2845 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 TRBV6-7A0A0A0MS04 114 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 H3BQ15 152 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 SSSCA1O60232 199 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 NDUFA3O95167 84 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 IGKV1-17P01599 117 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 PRB2P02812 416 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-224ENST00000497488 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 LINC00299Q6ZSB3 139 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 NDUFA11Q86Y39 141 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 LIMD2Q9BT23 127 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 CDC42SE1Q9NRR8 79 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 KLK9Q9UKQ9 250 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 C22orf24Q9Y442 160 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 PKD1L1Q8TDX9 2849 aa3.01□□□□□ -1.93
BRCA1-224ENST00000497488 NUPR2A6NF83 97 aa3□□□□□ -1.93
BRCA1-224ENST00000497488 G3V318 75 aa3□□□□□ -1.93
BRCA1-224ENST00000497488 MT-ATP8P03928 68 aa3□□□□□ -1.93
BRCA1-224ENST00000497488 DEFB136Q30KP8 78 aa3□□□□□ -1.93
BRCA1-224ENST00000497488 FAM103A1Q9BTL3 118 aaKnown RBP3□□□□□ -1.93
BRCA1-224ENST00000497488 NOTCH3Q9UM47 2321 aa3□□□□□ -1.93
BRCA1-224ENST00000497488 NBEAL1Q6ZS30 2694 aa3□□□□□ -1.93
BRCA1-224ENST00000497488 PRKDCP78527 4128 aaKnown RBP2.99□□□□□ -1.93
BRCA1-224ENST00000497488 TRBV10-1A0A0K0K1A3 114 aa2.99□□□□□ -1.93
BRCA1-224ENST00000497488 SNCAP37840 140 aa2.99□□□□□ -1.93
BRCA1-224ENST00000497488 DEFA5Q01523 94 aa2.99□□□□□ -1.93
BRCA1-224ENST00000497488 Q6ZRN7 208 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-224ENST00000497488 SPTSSBQ8NFR3 76 aa2.99□□□□□ -1.93
BRCA1-224ENST00000497488 MYOZ3Q8TDC0 251 aa2.99□□□□□ -1.93
BRCA1-224ENST00000497488 DMAC1Q96GE9 116 aa2.99□□□□□ -1.93
BRCA1-224ENST00000497488 ODF3Q96PU9 254 aa2.99□□□□□ -1.93
BRCA1-224ENST00000497488 VAMP8Q9BV40 100 aa2.99□□□□□ -1.93
BRCA1-224ENST00000497488 MRPL36Q9P0J6 103 aaKnown RBP2.99□□□□□ -1.93
BRCA1-224ENST00000497488 SCP2D1Q9UJQ7 156 aa2.99□□□□□ -1.93
BRCA1-224ENST00000497488 TRBV6-5A0A0K0K1A5 114 aa2.98□□□□□ -1.93
BRCA1-224ENST00000497488 PPYP01298 95 aa2.98□□□□□ -1.93
BRCA1-224ENST00000497488 APELAP0DMC3 54 aa2.98□□□□□ -1.93
BRCA1-224ENST00000497488 FXYD4P59646 89 aa2.98□□□□□ -1.93
BRCA1-224ENST00000497488 PLGLAQ15195 96 aa2.98□□□□□ -1.93
BRCA1-224ENST00000497488 WFDC9Q8NEX5 89 aa2.98□□□□□ -1.93
BRCA1-224ENST00000497488 IFI27L1Q96BM0 104 aa2.98□□□□□ -1.93
BRCA1-224ENST00000497488 DNAH9Q9NYC9 4486 aa2.97□□□□□ -1.93
BRCA1-224ENST00000497488 TRBV10-3A0A0K0K1G6 114 aa2.97□□□□□ -1.93
BRCA1-224ENST00000497488 IGHV3-30P01768 117 aa2.97□□□□□ -1.93
BRCA1-224ENST00000497488 IGHV3-30-5P0DP03 117 aa2.97□□□□□ -1.93
BRCA1-224ENST00000497488 FXYD3Q14802 87 aa2.97□□□□□ -1.93
BRCA1-224ENST00000497488 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
BRCA1-224ENST00000497488 ZNF818PQ6ZRF7 136 aa2.97□□□□□ -1.93
BRCA1-224ENST00000497488 S100A16Q96FQ6 103 aaKnown RBP2.97□□□□□ -1.93
BRCA1-224ENST00000497488 FXYD6Q9H0Q3 95 aa2.97□□□□□ -1.93
BRCA1-224ENST00000497488 MRPL35Q9NZE8 188 aaKnown RBP2.97□□□□□ -1.93
BRCA1-224ENST00000497488 MGAM2Q2M2H8 2515 aa2.97□□□□□ -1.93
BRCA1-224ENST00000497488 DNAH3Q8TD57 4116 aa2.97□□□□□ -1.93
BRCA1-224ENST00000497488 IGKV3-7A0A075B6H7 116 aa2.96□□□□□ -1.94
BRCA1-224ENST00000497488 JMJD7-PLA2G4BH0Y9G9 81 aa2.96□□□□□ -1.94
BRCA1-224ENST00000497488 K7EIL1 84 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms