RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ADAMTS9Q9P2N4 1935 aa1.92□□□□□ -2.1
SNRNP48-202ENST00000496946 C9orf163Q8N9P6 203 aa1.92□□□□□ -2.1
SNRNP48-202ENST00000496946 UNC13CQ8NB66 2214 aa1.92□□□□□ -2.1
SNRNP48-202ENST00000496946 CADP27708 2225 aa1.91□□□□□ -2.1
SNRNP48-202ENST00000496946 ZNF861PO60384 105 aa1.91□□□□□ -2.1
SNRNP48-202ENST00000496946 PRB3Q04118 309 aaPredicted RBP1.91□□□□□ -2.1
SNRNP48-202ENST00000496946 TRBV6-4A0A1B0GX49 114 aa1.91□□□□□ -2.1
SNRNP48-202ENST00000496946 POLR2KP53803 58 aaKnown RBP1.91□□□□□ -2.1
SNRNP48-202ENST00000496946 RPL39P62891 51 aaKnown RBP1.91□□□□□ -2.1
SNRNP48-202ENST00000496946 Q5W150 140 aa1.91□□□□□ -2.1
SNRNP48-202ENST00000496946 SPINK14Q6IE38 97 aa1.91□□□□□ -2.1
SNRNP48-202ENST00000496946 RPL39LQ96EH5 51 aaKnown RBP1.91□□□□□ -2.1
SNRNP48-202ENST00000496946 IGKV3OR2-268A0A0C4DH90 116 aa1.9□□□□□ -2.1
SNRNP48-202ENST00000496946 SEC16AO15027 2179 aa1.9□□□□□ -2.11
SNRNP48-202ENST00000496946 LINC00612Q8N6U2 182 aa1.9□□□□□ -2.11
SNRNP48-202ENST00000496946 ST20-AS1Q8NBB2 130 aa1.9□□□□□ -2.11
SNRNP48-202ENST00000496946 A0A1W2PNU3 283 aaPredicted RBP1.89□□□□□ -2.11
SNRNP48-202ENST00000496946 LINC00158P58513 81 aa1.89□□□□□ -2.11
SNRNP48-202ENST00000496946 SPINT4Q6UDR6 99 aa1.89□□□□□ -2.11
SNRNP48-202ENST00000496946 COL4A2P08572 1712 aa1.89□□□□□ -2.11
SNRNP48-202ENST00000496946 M0R2N4 97 aa1.89□□□□□ -2.11
SNRNP48-202ENST00000496946 GIG44P09565 113 aaPredicted RBP1.89□□□□□ -2.11
SNRNP48-202ENST00000496946 COX7BP24311 80 aa1.89□□□□□ -2.11
SNRNP48-202ENST00000496946 KLK12Q9UKR0 248 aa1.89□□□□□ -2.11
SNRNP48-202ENST00000496946 F5P12259 2224 aa1.89□□□□□ -2.11
SNRNP48-202ENST00000496946 IGKV2-28A0A075B6P5 120 aa1.88□□□□□ -2.11
SNRNP48-202ENST00000496946 IGKV2D-28P01615 120 aa1.88□□□□□ -2.11
SNRNP48-202ENST00000496946 MT3P25713 68 aa1.88□□□□□ -2.11
SNRNP48-202ENST00000496946 Q8N9L7 120 aa1.88□□□□□ -2.11
SNRNP48-202ENST00000496946 H3BRN7 92 aa1.88□□□□□ -2.11
SNRNP48-202ENST00000496946 LEAP2Q969E1 77 aa1.88□□□□□ -2.11
SNRNP48-202ENST00000496946 MED13LQ71F56 2210 aa1.88□□□□□ -2.11
SNRNP48-202ENST00000496946 IGKV2-40A0A087WW87 121 aaPredicted RBP1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 IGKV2D-40P01614 121 aaPredicted RBP1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 KRTAP10-12P60413 245 aa1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 USF3Q68DE3 2245 aa1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 SORL1Q92673 2214 aa1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 UNC79Q9P2D8 2635 aa1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 A0A1B0GU69 56 aa1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 J3QKU1 62 aa1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 IGLV7-43P04211 117 aa1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 BPTFQ12830 3046 aa1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 A0A087WTM6 91 aa1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 DEFB116Q30KQ4 102 aa1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 TYMSOSQ8TAI1 123 aa1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 RNF5Q99942 180 aa1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 LINC00472Q9H8W2 130 aa1.87□□□□□ -2.11
SNRNP48-202ENST00000496946 TRGV1A0A0A0MS02 117 aa1.86□□□□□ -2.11
SNRNP48-202ENST00000496946 KRTAP10-5P60370 271 aa1.86□□□□□ -2.11
SNRNP48-202ENST00000496946 COX17Q14061 63 aa1.86□□□□□ -2.11
SNRNP48-202ENST00000496946 Q6ZQY7 126 aa1.86□□□□□ -2.11
SNRNP48-202ENST00000496946 A0A1B0GU33 70 aa1.86□□□□□ -2.11
SNRNP48-202ENST00000496946 MRPL33O75394 65 aaKnown RBP1.86□□□□□ -2.11
SNRNP48-202ENST00000496946 LINC00575Q6W349 94 aa1.86□□□□□ -2.11
SNRNP48-202ENST00000496946 CDKN2A-AS1Q9UH64 79 aa1.85□□□□□ -2.11
SNRNP48-202ENST00000496946 PTPRQQ9UMZ3 2332 aa1.85□□□□□ -2.11
SNRNP48-202ENST00000496946 PLCE1Q9P212 2302 aa1.85□□□□□ -2.11
SNRNP48-202ENST00000496946 STATHP02808 62 aa1.85□□□□□ -2.11
SNRNP48-202ENST00000496946 LCE1EQ5T753 118 aa1.85□□□□□ -2.11
SNRNP48-202ENST00000496946 DEFB131BA0A096LNP1 70 aa1.84□□□□□ -2.11
SNRNP48-202ENST00000496946 LINC00315P59091 139 aa1.84□□□□□ -2.11
SNRNP48-202ENST00000496946 PATE1Q8WXA2 126 aa1.84□□□□□ -2.11
SNRNP48-202ENST00000496946 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.12
SNRNP48-202ENST00000496946 A0A096LNT2 108 aa1.84□□□□□ -2.12
SNRNP48-202ENST00000496946 RPL39P5Q59GN2 51 aa1.84□□□□□ -2.12
SNRNP48-202ENST00000496946 CNTRLQ7Z7A1 2325 aa1.84□□□□□ -2.12
SNRNP48-202ENST00000496946 URB1O60287 2271 aaKnown RBP1.83□□□□□ -2.12
SNRNP48-202ENST00000496946 IGKV2D-24A0A075B6R9 120 aa1.83□□□□□ -2.12
SNRNP48-202ENST00000496946 A0A1W2PPR1 153 aa1.83□□□□□ -2.12
SNRNP48-202ENST00000496946 FAM168BA1KXE4 195 aa1.83□□□□□ -2.12
SNRNP48-202ENST00000496946 WT1-ASQ06250 92 aa1.83□□□□□ -2.12
SNRNP48-202ENST00000496946 DEFB134Q4QY38 66 aa1.83□□□□□ -2.12
SNRNP48-202ENST00000496946 Q8IZM0 81 aa1.83□□□□□ -2.12
SNRNP48-202ENST00000496946 TMEM167AQ8TBQ9 72 aa1.83□□□□□ -2.12
SNRNP48-202ENST00000496946 KNL1Q8NG31 2342 aa1.83□□□□□ -2.12
SNRNP48-202ENST00000496946 NBDYA0A0U1RRE5 68 aa1.83□□□□□ -2.12
SNRNP48-202ENST00000496946 DEFB108AA8MXU0 73 aa1.83□□□□□ -2.12
SNRNP48-202ENST00000496946 HRES1P13985 223 aa1.83□□□□□ -2.12
SNRNP48-202ENST00000496946 A0A0J9YWU9 116 aa1.82□□□□□ -2.12
SNRNP48-202ENST00000496946 Q96NJ1 140 aa1.82□□□□□ -2.12
SNRNP48-202ENST00000496946 M0QY20 66 aa1.82□□□□□ -2.12
SNRNP48-202ENST00000496946 C4orf3Q8WVX3 66 aa1.82□□□□□ -2.12
SNRNP48-202ENST00000496946 PIEZO1Q92508 2521 aa1.81□□□□□ -2.12
SNRNP48-202ENST00000496946 DSCR10P59022 87 aa1.81□□□□□ -2.12
SNRNP48-202ENST00000496946 RPL37AP61513 92 aaKnown RBP1.81□□□□□ -2.12
SNRNP48-202ENST00000496946 MAPK1IP1LQ8NDC0 245 aa1.81□□□□□ -2.12
SNRNP48-202ENST00000496946 LCE3EQ5T5B0 92 aa1.81□□□□□ -2.12
SNRNP48-202ENST00000496946 I3L2K1 104 aa1.8□□□□□ -2.12
SNRNP48-202ENST00000496946 CCL19Q99731 98 aa1.8□□□□□ -2.12
SNRNP48-202ENST00000496946 ANKRD17O75179 2603 aaKnown RBP1.8□□□□□ -2.12
SNRNP48-202ENST00000496946 C5orf56Q8N8D9 126 aa1.8□□□□□ -2.12
SNRNP48-202ENST00000496946 LINC00304Q8N9R0 145 aa1.8□□□□□ -2.12
SNRNP48-202ENST00000496946 DEFB104AQ8WTQ1 72 aa1.8□□□□□ -2.12
SNRNP48-202ENST00000496946 K7EQZ3 153 aa1.79□□□□□ -2.12
SNRNP48-202ENST00000496946 ACYP2P14621 99 aa1.79□□□□□ -2.12
SNRNP48-202ENST00000496946 SSBP3-AS1Q7Z2R9 100 aa1.79□□□□□ -2.12
SNRNP48-202ENST00000496946 ASH1LQ9NR48 2969 aaKnown RBP1.79□□□□□ -2.12
SNRNP48-202ENST00000496946 COX6A2Q02221 97 aa1.79□□□□□ -2.12
SNRNP48-202ENST00000496946 RTTNQ86VV8 2226 aa1.79□□□□□ -2.12
SNRNP48-202ENST00000496946 DOPEY2Q9Y3R5 2298 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms