RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 A0A0C4DFX4 3053 aa-0.43□□□□□ -2.48
CD46-218ENST00000496723 KIF20BQ96Q89 1820 aa-0.43□□□□□ -2.48
CD46-218ENST00000496723 COL4A6Q14031 1691 aa-0.43□□□□□ -2.48
CD46-218ENST00000496723 LAMA1P25391 3075 aa-0.44□□□□□ -2.48
CD46-218ENST00000496723 CCDC168Q8NDH2 2452 aa-0.44□□□□□ -2.48
CD46-218ENST00000496723 DSPP15924 2871 aaKnown RBP-0.44□□□□□ -2.48
CD46-218ENST00000496723 M0R2T5 61 aa-0.44□□□□□ -2.48
CD46-218ENST00000496723 SEC11AP67812 179 aa-0.44□□□□□ -2.48
CD46-218ENST00000496723 NLRP1Q9C000 1473 aa-0.44□□□□□ -2.48
CD46-218ENST00000496723 TEX15Q9BXT5 2789 aa-0.44□□□□□ -2.48
CD46-218ENST00000496723 KNDC1Q76NI1 1749 aa-0.44□□□□□ -2.48
CD46-218ENST00000496723 KIAA1551Q9HCM1 1747 aa-0.44□□□□□ -2.48
CD46-218ENST00000496723 MUC17Q685J3 4493 aa-0.44□□□□□ -2.48
CD46-218ENST00000496723 NBEAQ8NFP9 2946 aa-0.45□□□□□ -2.48
CD46-218ENST00000496723 PLEKHH2Q8IVE3 1493 aa-0.45□□□□□ -2.48
CD46-218ENST00000496723 ACACAQ13085 2346 aa-0.45□□□□□ -2.48
CD46-218ENST00000496723 C2orf88Q9BSF0 95 aa-0.45□□□□□ -2.48
CD46-218ENST00000496723 LINC00846Q9NV44 126 aa-0.45□□□□□ -2.48
CD46-218ENST00000496723 CRIPTQ9P021 101 aa-0.45□□□□□ -2.48
CD46-218ENST00000496723 NBEAL2Q6ZNJ1 2754 aa-0.45□□□□□ -2.48
CD46-218ENST00000496723 MYH4Q9Y623 1939 aa-0.45□□□□□ -2.48
CD46-218ENST00000496723 PKD1L2Q7Z442 2459 aa-0.45□□□□□ -2.48
CD46-218ENST00000496723 SHPRHQ149N8 1683 aa-0.46□□□□□ -2.48
CD46-218ENST00000496723 MON2Q7Z3U7 1717 aa-0.46□□□□□ -2.48
CD46-218ENST00000496723 DOPEY1Q5JWR5 2465 aa-0.46□□□□□ -2.48
CD46-218ENST00000496723 SPRR2EP22531 72 aa-0.46□□□□□ -2.48
CD46-218ENST00000496723 SPRR2AP35326 72 aa-0.46□□□□□ -2.48
CD46-218ENST00000496723 SNCAP37840 140 aa-0.46□□□□□ -2.48
CD46-218ENST00000496723 GTF2H5Q6ZYL4 71 aa-0.46□□□□□ -2.48
CD46-218ENST00000496723 APLNQ9ULZ1 77 aa-0.46□□□□□ -2.48
CD46-218ENST00000496723 WDR87Q6ZQQ6 2873 aa-0.46□□□□□ -2.48
CD46-218ENST00000496723 FAM186AA6NE01 2351 aa-0.46□□□□□ -2.48
CD46-218ENST00000496723 APOBP04114 4563 aaKnown RBP-0.46□□□□□ -2.48
CD46-218ENST00000496723 DNAH1Q9P2D7 4330 aa-0.46□□□□□ -2.48
CD46-218ENST00000496723 CGREF1Q99674 301 aa-0.47□□□□□ -2.48
CD46-218ENST00000496723 VAMP8Q9BV40 100 aa-0.47□□□□□ -2.48
CD46-218ENST00000496723 HYDINQ4G0P3 5121 aa-0.47□□□□□ -2.48
CD46-218ENST00000496723 TARBP1Q13395 1621 aaKnown RBP-0.47□□□□□ -2.48
CD46-218ENST00000496723 ANK3Q12955 4377 aaKnown RBP-0.47□□□□□ -2.49
CD46-218ENST00000496723 LRRC37AA6NMS7 1700 aa-0.47□□□□□ -2.49
CD46-218ENST00000496723 NIPBLQ6KC79 2804 aaeCLIP-0.47□□□□□ -2.49
CD46-218ENST00000496723 BCORQ6W2J9 1755 aa-0.47□□□□□ -2.49
CD46-218ENST00000496723 DNAH11Q96DT5 4516 aa-0.48□□□□□ -2.49
CD46-218ENST00000496723 A0A1B0GU69 56 aa-0.48□□□□□ -2.49
CD46-218ENST00000496723 MT4P47944 62 aa-0.48□□□□□ -2.49
CD46-218ENST00000496723 UTP20O75691 2785 aaKnown RBP-0.48□□□□□ -2.49
CD46-218ENST00000496723 EDC4Q6P2E9 1401 aaKnown RBP-0.48□□□□□ -2.49
CD46-218ENST00000496723 SLIT1O75093 1534 aa-0.48□□□□□ -2.49
CD46-218ENST00000496723 CEP290O15078 2479 aa-0.49□□□□□ -2.49
CD46-218ENST00000496723 A0A087WVE0 104 aa-0.49□□□□□ -2.49
CD46-218ENST00000496723 CPSF4LA6NMK7 179 aaKnown RBP-0.49□□□□□ -2.49
CD46-218ENST00000496723 TMEM262E9PQX1 116 aa-0.49□□□□□ -2.49
CD46-218ENST00000496723 H1FX-AS1Q4G0G2 97 aa-0.49□□□□□ -2.49
CD46-218ENST00000496723 LELP1Q5T871 98 aa-0.49□□□□□ -2.49
CD46-218ENST00000496723 NEBP20929 6669 aa-0.49□□□□□ -2.49
CD46-218ENST00000496723 DNAH2Q9P225 4427 aa-0.49□□□□□ -2.49
CD46-218ENST00000496723 BIRC6Q9NR09 4857 aa-0.5□□□□□ -2.49
CD46-218ENST00000496723 SPENQ96T58 3664 aaKnown RBP-0.5□□□□□ -2.49
CD46-218ENST00000496723 RIF1Q5UIP0 2472 aaKnown RBP-0.5□□□□□ -2.49
CD46-218ENST00000496723 H3BQF6 201 aa-0.5□□□□□ -2.49
CD46-218ENST00000496723 DEFB135Q30KP9 77 aa-0.5□□□□□ -2.49
CD46-218ENST00000496723 NKTRP30414 1462 aaKnown RBP-0.5□□□□□ -2.49
CD46-218ENST00000496723 C5P01031 1676 aa-0.5□□□□□ -2.49
CD46-218ENST00000496723 CMYA5Q8N3K9 4069 aa-0.5□□□□□ -2.49
CD46-218ENST00000496723 MTORP42345 2549 aa-0.5□□□□□ -2.49
CD46-218ENST00000496723 hADV29S1A0JD25 119 aa-0.51□□□□□ -2.49
CD46-218ENST00000496723 RGPD3A6NKT7 1758 aaPredicted RBP-0.51□□□□□ -2.49
CD46-218ENST00000496723 LINC00587B1AMM8 73 aa-0.51□□□□□ -2.49
CD46-218ENST00000496723 C4AP0C0L4 1744 aa-0.51□□□□□ -2.49
CD46-218ENST00000496723 C4BP0C0L5 1744 aa-0.51□□□□□ -2.49
CD46-218ENST00000496723 ADAMTS12P58397 1594 aa-0.51□□□□□ -2.49
CD46-218ENST00000496723 QSER1Q2KHR3 1735 aa-0.51□□□□□ -2.49
CD46-218ENST00000496723 DEFB112Q30KQ8 113 aa-0.51□□□□□ -2.49
CD46-218ENST00000496723 UBR3Q6ZT12 1888 aa-0.51□□□□□ -2.49
CD46-218ENST00000496723 RGPD4Q7Z3J3 1758 aa-0.51□□□□□ -2.49
CD46-218ENST00000496723 C6orf201Q7Z4U5 140 aa-0.51□□□□□ -2.49
CD46-218ENST00000496723 SCN11AQ9UI33 1791 aa-0.51□□□□□ -2.49
CD46-218ENST00000496723 MGAM2Q2M2H8 2515 aa-0.52□□□□□ -2.49
CD46-218ENST00000496723 PKD1L3Q7Z443 1732 aa-0.52□□□□□ -2.49
CD46-218ENST00000496723 CRYBG1Q9Y4K1 1723 aa-0.52□□□□□ -2.49
CD46-218ENST00000496723 PTPN23Q9H3S7 1636 aa-0.52□□□□□ -2.49
CD46-218ENST00000496723 C7orf77A4D0Y5 90 aa-0.52□□□□□ -2.49
CD46-218ENST00000496723 NDUFC1O43677 76 aa-0.52□□□□□ -2.49
CD46-218ENST00000496723 HSD52Q0P140 79 aa-0.52□□□□□ -2.49
CD46-218ENST00000496723 RELNP78509 3460 aa-0.52□□□□□ -2.49
CD46-218ENST00000496723 RYR1P21817 5038 aa-0.53□□□□□ -2.49
CD46-218ENST00000496723 CUX1P39880 1505 aa-0.53□□□□□ -2.49
CD46-218ENST00000496723 ZFYVE16Q7Z3T8 1539 aa-0.53□□□□□ -2.49
CD46-218ENST00000496723 ABCC5O15440 1437 aa-0.53□□□□□ -2.49
CD46-218ENST00000496723 SACSQ9NZJ4 4579 aa-0.53□□□□□ -2.49
CD46-218ENST00000496723 C20orf202A1L168 122 aa-0.53□□□□□ -2.49
CD46-218ENST00000496723 I3L3M4 83 aa-0.53□□□□□ -2.49
CD46-218ENST00000496723 PSMG4Q5JS54 123 aa-0.53□□□□□ -2.49
CD46-218ENST00000496723 SPRR2FQ96RM1 72 aa-0.53□□□□□ -2.49
CD46-218ENST00000496723 DNAH7Q8WXX0 4024 aa-0.53□□□□□ -2.49
CD46-218ENST00000496723 MLH3Q9UHC1 1453 aa-0.54□□□□□ -2.5
CD46-218ENST00000496723 RGPD1P0DJD0 1748 aa-0.54□□□□□ -2.5
CD46-218ENST00000496723 UBR1Q8IWV7 1749 aa-0.54□□□□□ -2.5
CD46-218ENST00000496723 A0A0G2JND7 137 aa-0.54□□□□□ -2.5
CD46-218ENST00000496723 H0Y9P7 68 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms