RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 FOXI1Q12951 378 aa4.72□□□□□ -1.65
USP39-219ENST00000496047 ETDBQ3ZM63 59 aa4.72□□□□□ -1.65
USP39-219ENST00000496047 LINC01556Q5JQF7 62 aa4.72□□□□□ -1.65
USP39-219ENST00000496047 TEN1Q86WV5 123 aa4.72□□□□□ -1.65
USP39-219ENST00000496047 OR13C6PQ8NH95 151 aa4.72□□□□□ -1.65
USP39-219ENST00000496047 PPDPFLQ8WWR9 84 aa4.72□□□□□ -1.65
USP39-219ENST00000496047 CARD19Q96LW7 228 aa4.72□□□□□ -1.65
USP39-219ENST00000496047 H0YGX0 51 aa4.71□□□□□ -1.66
USP39-219ENST00000496047 LST1O00453 97 aa4.71□□□□□ -1.66
USP39-219ENST00000496047 NDUFC2O95298 119 aa4.71□□□□□ -1.66
USP39-219ENST00000496047 CCL18P55774 89 aa4.71□□□□□ -1.66
USP39-219ENST00000496047 WFDC2Q14508 124 aa4.71□□□□□ -1.66
USP39-219ENST00000496047 SOSTDC1Q6X4U4 206 aa4.71□□□□□ -1.66
USP39-219ENST00000496047 WFDC10BQ8IUB3 73 aa4.71□□□□□ -1.66
USP39-219ENST00000496047 ANKRD29Q8N6D5 301 aa4.71□□□□□ -1.66
USP39-219ENST00000496047 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
USP39-219ENST00000496047 PRO0461Q9UI25 63 aa4.71□□□□□ -1.66
USP39-219ENST00000496047 K7EIL1 84 aa4.7□□□□□ -1.66
USP39-219ENST00000496047 RPL28P46779 137 aaKnown RBP4.7□□□□□ -1.66
USP39-219ENST00000496047 C2orf82Q6UX34 121 aa4.7□□□□□ -1.66
USP39-219ENST00000496047 MTURNQ8N3F0 131 aa4.7□□□□□ -1.66
USP39-219ENST00000496047 MRAPQ8TCY5 172 aa4.7□□□□□ -1.66
USP39-219ENST00000496047 PRKDCP78527 4128 aaKnown RBP4.69□□□□□ -1.66
USP39-219ENST00000496047 GVQW2A0A096LPI5 108 aaPredicted RBP4.69□□□□□ -1.66
USP39-219ENST00000496047 TRACP01848 142 aa4.69□□□□□ -1.66
USP39-219ENST00000496047 S100A7L2Q5SY68 101 aa4.69□□□□□ -1.66
USP39-219ENST00000496047 ENHOQ6UWT2 76 aa4.69□□□□□ -1.66
USP39-219ENST00000496047 CAMK2N2Q96S95 79 aa4.69□□□□□ -1.66
USP39-219ENST00000496047 TMEM126AQ9H061 195 aa4.69□□□□□ -1.66
USP39-219ENST00000496047 IGKV2D-24A0A075B6R9 120 aa4.68□□□□□ -1.66
USP39-219ENST00000496047 DNAH10OSP0CZ25 163 aa4.68□□□□□ -1.66
USP39-219ENST00000496047 KIAA0087Q14695 138 aa4.68□□□□□ -1.66
USP39-219ENST00000496047 ESRGQ1W209 222 aa4.68□□□□□ -1.66
USP39-219ENST00000496047 CLEC2BQ92478 149 aa4.68□□□□□ -1.66
USP39-219ENST00000496047 C2orf48Q96LS8 159 aa4.68□□□□□ -1.66
USP39-219ENST00000496047 EPPK1P58107 5090 aaKnown RBP4.68□□□□□ -1.66
USP39-219ENST00000496047 A0A1B0GX51 115 aa4.67□□□□□ -1.66
USP39-219ENST00000496047 UBE2DNLQ8IWF7 75 aa4.67□□□□□ -1.66
USP39-219ENST00000496047 LINC00337Q8N6G1 96 aa4.67□□□□□ -1.66
USP39-219ENST00000496047 NTN5Q8WTR8 489 aaPredicted RBP4.67□□□□□ -1.66
USP39-219ENST00000496047 LINC01600Q96MT4 127 aa4.67□□□□□ -1.66
USP39-219ENST00000496047 PRB2P02812 416 aaPredicted RBP4.66□□□□□ -1.66
USP39-219ENST00000496047 SMIM11BQ8TCY0 68 aa4.66□□□□□ -1.66
USP39-219ENST00000496047 B9D2Q9BPU9 175 aa4.66□□□□□ -1.66
USP39-219ENST00000496047 TENM1Q9UKZ4 2725 aa4.65□□□□□ -1.66
USP39-219ENST00000496047 IGKV2-28A0A075B6P5 120 aa4.65□□□□□ -1.67
USP39-219ENST00000496047 H3BQ85 93 aa4.65□□□□□ -1.67
USP39-219ENST00000496047 IGKV2D-28P01615 120 aa4.65□□□□□ -1.67
USP39-219ENST00000496047 NHLRC4P0CG21 123 aaPredicted RBP4.65□□□□□ -1.67
USP39-219ENST00000496047 INAFM2P0DMQ5 153 aa4.65□□□□□ -1.67
USP39-219ENST00000496047 UNQ6190/PRO20217Q6UXQ8 127 aa4.65□□□□□ -1.67
USP39-219ENST00000496047 UPK3BQ9BT76 320 aa4.65□□□□□ -1.67
USP39-219ENST00000496047 Q9HAA7 133 aa4.65□□□□□ -1.67
USP39-219ENST00000496047 TRRAPQ9Y4A5 3859 aa4.65□□□□□ -1.67
USP39-219ENST00000496047 NUPR2A6NF83 97 aa4.64□□□□□ -1.67
USP39-219ENST00000496047 NCR3O14931 201 aa4.64□□□□□ -1.67
USP39-219ENST00000496047 HIGD2BQ4VC39 106 aa4.64□□□□□ -1.67
USP39-219ENST00000496047 PKIGQ9Y2B9 76 aa4.64□□□□□ -1.67
USP39-219ENST00000496047 LINC00588Q9Y4M8 146 aa4.64□□□□□ -1.67
USP39-219ENST00000496047 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
USP39-219ENST00000496047 ACYP1P07311 99 aa4.63□□□□□ -1.67
USP39-219ENST00000496047 SYCNQ0VAF6 134 aa4.63□□□□□ -1.67
USP39-219ENST00000496047 C6orf223Q8N319 242 aa4.63□□□□□ -1.67
USP39-219ENST00000496047 SIGMAR1Q99720 223 aa4.63□□□□□ -1.67
USP39-219ENST00000496047 ORMDL1Q9P0S3 153 aa4.63□□□□□ -1.67
USP39-219ENST00000496047 C6orf48Q9UBA6 75 aa4.63□□□□□ -1.67
USP39-219ENST00000496047 VWFP04275 2813 aa4.63□□□□□ -1.67
USP39-219ENST00000496047 PCLOQ9Y6V0 5065 aa4.62□□□□□ -1.67
USP39-219ENST00000496047 NDUFC2-KCTD14E9PQ53 114 aa4.62□□□□□ -1.67
USP39-219ENST00000496047 BAALC-AS2P0C853 105 aa4.62□□□□□ -1.67
USP39-219ENST00000496047 C14orf177Q52M58 125 aa4.62□□□□□ -1.67
USP39-219ENST00000496047 C9orf116Q5BN46 136 aaPredicted RBP4.62□□□□□ -1.67
USP39-219ENST00000496047 TTC32Q5I0X7 151 aa4.62□□□□□ -1.67
USP39-219ENST00000496047 C15orf56Q8N910 161 aa4.62□□□□□ -1.67
USP39-219ENST00000496047 DIRC1Q969H9 104 aa4.62□□□□□ -1.67
USP39-219ENST00000496047 FAM240AA0A1B0GVK7 77 aa4.61□□□□□ -1.67
USP39-219ENST00000496047 LECT2O14960 151 aa4.61□□□□□ -1.67
USP39-219ENST00000496047 PSCAO43653 123 aa4.61□□□□□ -1.67
USP39-219ENST00000496047 SCGB1A1P11684 91 aa4.61□□□□□ -1.67
USP39-219ENST00000496047 RPL18AQ02543 176 aaKnown RBP4.61□□□□□ -1.67
USP39-219ENST00000496047 C10orf25Q5T742 122 aa4.61□□□□□ -1.67
USP39-219ENST00000496047 Q6ZRU5 148 aa4.61□□□□□ -1.67
USP39-219ENST00000496047 NKAPP1Q8N9T2 125 aa4.61□□□□□ -1.67
USP39-219ENST00000496047 LINC00526Q96FQ7 95 aa4.61□□□□□ -1.67
USP39-219ENST00000496047 TRAV23DV6A0A075B6W5 121 aa4.6□□□□□ -1.67
USP39-219ENST00000496047 TEX49A0A1B0GTD5 131 aa4.6□□□□□ -1.67
USP39-219ENST00000496047 JMJD7-PLA2G4BH0Y9G9 81 aa4.6□□□□□ -1.67
USP39-219ENST00000496047 TMEM256-PLSCR3K7ERE1 68 aa4.6□□□□□ -1.67
USP39-219ENST00000496047 M0R378 163 aa4.6□□□□□ -1.67
USP39-219ENST00000496047 KRTAP26-1Q6PEX3 210 aa4.6□□□□□ -1.67
USP39-219ENST00000496047 A0A087WYN8 130 aa4.59□□□□□ -1.67
USP39-219ENST00000496047 USP17L23D6RBM5 183 aa4.59□□□□□ -1.67
USP39-219ENST00000496047 IGLV6-57P01721 117 aa4.59□□□□□ -1.67
USP39-219ENST00000496047 TLX1NBP0CAT3 122 aa4.59□□□□□ -1.67
USP39-219ENST00000496047 HYDINQ4G0P3 5121 aa4.59□□□□□ -1.67
USP39-219ENST00000496047 C6orf99Q4VX62 202 aa4.59□□□□□ -1.67
USP39-219ENST00000496047 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
USP39-219ENST00000496047 TRBV7-6A0A0J9YX20 115 aa4.58□□□□□ -1.68
USP39-219ENST00000496047 LOC107984640A0A0U1RRK4 108 aa4.58□□□□□ -1.68
USP39-219ENST00000496047 hADV29S1A0JD25 119 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms