RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 H0YGX0 51 aa9.26□□□□□ -0.93
GPC1-209ENST00000495100 Q6ZTC4 211 aa9.26□□□□□ -0.93
GPC1-209ENST00000495100 DPH3Q96FX2 82 aa9.26□□□□□ -0.93
GPC1-209ENST00000495100 CD164L2Q6UWJ8 174 aa9.25□□□□□ -0.93
GPC1-209ENST00000495100 OVOL2Q9BRP0 275 aa9.25□□□□□ -0.93
GPC1-209ENST00000495100 TMEM126AQ9H061 195 aa9.25□□□□□ -0.93
GPC1-209ENST00000495100 LINC00643Q86TS7 51 aa9.25□□□□□ -0.93
GPC1-209ENST00000495100 RPL28P46779 137 aaKnown RBP9.25□□□□□ -0.93
GPC1-209ENST00000495100 KPRPQ5T749 579 aaPredicted RBP9.23□□□□□ -0.93
GPC1-209ENST00000495100 FAM19A1Q7Z5A9 133 aa9.23□□□□□ -0.93
GPC1-209ENST00000495100 RPL37AP8A6NKH3 93 aa9.22□□□□□ -0.93
GPC1-209ENST00000495100 C1orf43Q9BWL3 253 aa9.22□□□□□ -0.93
GPC1-209ENST00000495100 TRBV10-3A0A0K0K1G6 114 aa9.22□□□□□ -0.93
GPC1-209ENST00000495100 IL17DQ8TAD2 202 aa9.21□□□□□ -0.93
GPC1-209ENST00000495100 UBL5Q9BZL1 73 aa9.21□□□□□ -0.94
GPC1-209ENST00000495100 DSCR8Q96T75 97 aa9.2□□□□□ -0.94
GPC1-209ENST00000495100 A0A0J9YWU9 116 aa9.2□□□□□ -0.94
GPC1-209ENST00000495100 Q8IZM0 81 aa9.2□□□□□ -0.94
GPC1-209ENST00000495100 LYRM9A8MSI8 78 aa9.19□□□□□ -0.94
GPC1-209ENST00000495100 KIR2DL5BQ8NHK3 375 aa9.19□□□□□ -0.94
GPC1-209ENST00000495100 RBM3P98179 157 aaKnown RBP9.19□□□□□ -0.94
GPC1-209ENST00000495100 IGKV2-24A0A0C4DH68 120 aa9.18□□□□□ -0.94
GPC1-209ENST00000495100 LOC107984640A0A0U1RRK4 108 aa9.18□□□□□ -0.94
GPC1-209ENST00000495100 C3orf84H3BNL1 204 aa9.18□□□□□ -0.94
GPC1-209ENST00000495100 ACYP1P07311 99 aa9.18□□□□□ -0.94
GPC1-209ENST00000495100 C16orf95Q9H693 158 aa9.18□□□□□ -0.94
GPC1-209ENST00000495100 Q8N814 137 aa9.18□□□□□ -0.94
GPC1-209ENST00000495100 Q8NDZ9 215 aa9.17□□□□□ -0.94
GPC1-209ENST00000495100 Q8N9L7 120 aa9.17□□□□□ -0.94
GPC1-209ENST00000495100 NKAPP1Q8N9T2 125 aa9.17□□□□□ -0.94
GPC1-209ENST00000495100 DEFB131BA0A096LNP1 70 aa9.17□□□□□ -0.94
GPC1-209ENST00000495100 C20orf197Q8N268 126 aa9.17□□□□□ -0.94
GPC1-209ENST00000495100 GHRHP01286 108 aa9.15□□□□□ -0.94
GPC1-209ENST00000495100 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.15□□□□□ -0.94
GPC1-209ENST00000495100 A0A096LNI7 61 aa9.15□□□□□ -0.94
GPC1-209ENST00000495100 C3orf22Q8N5N4 141 aa9.15□□□□□ -0.95
GPC1-209ENST00000495100 USP17L23D6RBM5 183 aa9.14□□□□□ -0.95
GPC1-209ENST00000495100 TMEM256-PLSCR3K7ERE1 68 aa9.14□□□□□ -0.95
GPC1-209ENST00000495100 M0R2N4 97 aa9.14□□□□□ -0.95
GPC1-209ENST00000495100 LYPD5Q6UWN5 251 aa9.14□□□□□ -0.95
GPC1-209ENST00000495100 DIRC1Q969H9 104 aa9.14□□□□□ -0.95
GPC1-209ENST00000495100 CSMD3Q7Z407 3707 aa9.14□□□□□ -0.95
GPC1-209ENST00000495100 SMIM9A6NGZ8 99 aa9.14□□□□□ -0.95
GPC1-209ENST00000495100 SNURFQ9Y675 71 aa9.14□□□□□ -0.95
GPC1-209ENST00000495100 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.13□□□□□ -0.95
GPC1-209ENST00000495100 C11orf45Q8TAV5 145 aa9.13□□□□□ -0.95
GPC1-209ENST00000495100 MIFP14174 115 aa9.13□□□□□ -0.95
GPC1-209ENST00000495100 LELP1Q5T871 98 aa9.13□□□□□ -0.95
GPC1-209ENST00000495100 Q6ZRU5 148 aa9.13□□□□□ -0.95
GPC1-209ENST00000495100 UPK3BQ9BT76 320 aa9.13□□□□□ -0.95
GPC1-209ENST00000495100 A0A1B0GUV1 79 aa9.12□□□□□ -0.95
GPC1-209ENST00000495100 Q8NAQ8 132 aa9.11□□□□□ -0.95
GPC1-209ENST00000495100 C6orf48Q9UBA6 75 aa9.11□□□□□ -0.95
GPC1-209ENST00000495100 FAM19A5Q7Z5A7 132 aaPredicted RBP9.11□□□□□ -0.95
GPC1-209ENST00000495100 FAM240AA0A1B0GVK7 77 aa9.1□□□□□ -0.95
GPC1-209ENST00000495100 KIAA0087Q14695 138 aa9.1□□□□□ -0.95
GPC1-209ENST00000495100 PSCAO43653 123 aa9.1□□□□□ -0.95
GPC1-209ENST00000495100 COX7BP24311 80 aa9.1□□□□□ -0.95
GPC1-209ENST00000495100 ESRGQ1W209 222 aa9.09□□□□□ -0.95
GPC1-209ENST00000495100 ZNF73O43830 326 aaPredicted RBP9.09□□□□□ -0.95
GPC1-209ENST00000495100 UBE2BP63146 152 aa9.09□□□□□ -0.95
GPC1-209ENST00000495100 C22orf24Q9Y442 160 aa9.08□□□□□ -0.96
GPC1-209ENST00000495100 JMJD7-PLA2G4BH0Y9G9 81 aa9.08□□□□□ -0.96
GPC1-209ENST00000495100 ATOX1O00244 68 aa9.07□□□□□ -0.96
GPC1-209ENST00000495100 A0A0G2JQZ4 141 aa9.06□□□□□ -0.96
GPC1-209ENST00000495100 A0A1W2PNN7 141 aa9.06□□□□□ -0.96
GPC1-209ENST00000495100 CCKP06307 115 aa9.06□□□□□ -0.96
GPC1-209ENST00000495100 PPDPFQ9H3Y8 114 aa9.06□□□□□ -0.96
GPC1-209ENST00000495100 M0QXV9 152 aa9.06□□□□□ -0.96
GPC1-209ENST00000495100 UQCRQO14949 82 aa9.06□□□□□ -0.96
GPC1-209ENST00000495100 UBE2DNLQ8IWF7 75 aa9.06□□□□□ -0.96
GPC1-209ENST00000495100 DEFB116Q30KQ4 102 aa9.05□□□□□ -0.96
GPC1-209ENST00000495100 TRBV7-7A0A0K0K1E9 115 aa9.05□□□□□ -0.96
GPC1-209ENST00000495100 Q6Q795 121 aa9.05□□□□□ -0.96
GPC1-209ENST00000495100 LINC00575Q6W349 94 aa9.05□□□□□ -0.96
GPC1-209ENST00000495100 KRTAP10-11P60412 298 aa9.04□□□□□ -0.96
GPC1-209ENST00000495100 SYCNQ0VAF6 134 aa9.04□□□□□ -0.96
GPC1-209ENST00000495100 FAM168BA1KXE4 195 aa9.04□□□□□ -0.96
GPC1-209ENST00000495100 COX7CP15954 63 aa9.03□□□□□ -0.96
GPC1-209ENST00000495100 HIGD2AQ9BW72 106 aa9.03□□□□□ -0.96
GPC1-209ENST00000495100 CYSTM1Q9H1C7 97 aa9.03□□□□□ -0.96
GPC1-209ENST00000495100 ETDCA0A1B0GVM5 59 aa9.02□□□□□ -0.97
GPC1-209ENST00000495100 LINC01561Q8N1V8 128 aa9.02□□□□□ -0.97
GPC1-209ENST00000495100 CASC10Q5T4H9 136 aa9.02□□□□□ -0.97
GPC1-209ENST00000495100 SRRM2Q9UQ35 2752 aaKnown RBP9.01□□□□□ -0.97
GPC1-209ENST00000495100 NREPQ16612 68 aa9.01□□□□□ -0.97
GPC1-209ENST00000495100 FAM19A3Q7Z5A8 133 aa9.01□□□□□ -0.97
GPC1-209ENST00000495100 KRTAP24-1Q3LI83 254 aa9□□□□□ -0.97
GPC1-209ENST00000495100 PRR4Q16378 134 aa8.99□□□□□ -0.97
GPC1-209ENST00000495100 Q6ZRP5 223 aa8.99□□□□□ -0.97
GPC1-209ENST00000495100 FUSP35637 526 aaKnown RBP eCLIP8.99□□□□□ -0.97
GPC1-209ENST00000495100 COX17Q14061 63 aa8.99□□□□□ -0.97
GPC1-209ENST00000495100 ANK3Q12955 4377 aaKnown RBP8.99□□□□□ -0.97
GPC1-209ENST00000495100 Q6ZVQ6 151 aa8.98□□□□□ -0.97
GPC1-209ENST00000495100 SERP2Q8N6R1 65 aa8.98□□□□□ -0.97
GPC1-209ENST00000495100 IMUPQ9GZP8 106 aa8.98□□□□□ -0.97
GPC1-209ENST00000495100 TRAV10A0A0B4J240 114 aa8.97□□□□□ -0.97
GPC1-209ENST00000495100 Q6JHZ5 121 aa8.97□□□□□ -0.97
GPC1-209ENST00000495100 BPY2O14599 106 aa8.96□□□□□ -0.97
GPC1-209ENST00000495100 ST20-AS1Q8NBB2 130 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms