RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 IGLV1-50A0A075B6I6 118 aa5.08□□□□□ -1.6
LRCH3-219ENST00000494069 C11orf86A6NJI1 115 aa5.08□□□□□ -1.6
LRCH3-219ENST00000494069 H3BRM9 83 aa5.08□□□□□ -1.6
LRCH3-219ENST00000494069 NUPR1O60356 82 aa5.08□□□□□ -1.6
LRCH3-219ENST00000494069 HBDP02042 147 aa5.08□□□□□ -1.6
LRCH3-219ENST00000494069 YPEL4Q96NS1 127 aa5.08□□□□□ -1.6
LRCH3-219ENST00000494069 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
LRCH3-219ENST00000494069 BCE1O60756 84 aa5.07□□□□□ -1.6
LRCH3-219ENST00000494069 ATP5LO75964 103 aa5.07□□□□□ -1.6
LRCH3-219ENST00000494069 BAGE3Q86Y29 109 aa5.07□□□□□ -1.6
LRCH3-219ENST00000494069 Q8NDZ9 215 aa5.07□□□□□ -1.6
LRCH3-219ENST00000494069 ZNF625Q96I27 306 aaPredicted RBP5.07□□□□□ -1.6
LRCH3-219ENST00000494069 ANAPC11Q9NYG5 84 aa5.07□□□□□ -1.6
LRCH3-219ENST00000494069 IGLV5-37A0A075B6J1 123 aa5.06□□□□□ -1.6
LRCH3-219ENST00000494069 A0A087X002 238 aa5.06□□□□□ -1.6
LRCH3-219ENST00000494069 SVBPQ8N300 66 aa5.06□□□□□ -1.6
LRCH3-219ENST00000494069 SND1-IT1Q9HBX3 110 aa5.06□□□□□ -1.6
LRCH3-219ENST00000494069 ERG28Q9UKR5 140 aa5.06□□□□□ -1.6
LRCH3-219ENST00000494069 IGKV2-28A0A075B6P5 120 aa5.05□□□□□ -1.6
LRCH3-219ENST00000494069 SNAPINO95295 136 aa5.05□□□□□ -1.6
LRCH3-219ENST00000494069 IGKV2D-28P01615 120 aa5.05□□□□□ -1.6
LRCH3-219ENST00000494069 VPREB1P12018 145 aa5.05□□□□□ -1.6
LRCH3-219ENST00000494069 RPL28P46779 137 aaKnown RBP5.05□□□□□ -1.6
LRCH3-219ENST00000494069 TMEM170BQ5T4T1 132 aa5.05□□□□□ -1.6
LRCH3-219ENST00000494069 KRTAP13-1Q8IUC0 172 aa5.05□□□□□ -1.6
LRCH3-219ENST00000494069 TSPAN13O95857 204 aa5.04□□□□□ -1.6
LRCH3-219ENST00000494069 RPL13AP40429 203 aaKnown RBP5.04□□□□□ -1.6
LRCH3-219ENST00000494069 NDUFA5Q16718 116 aa5.04□□□□□ -1.6
LRCH3-219ENST00000494069 NKAPP1Q8N9T2 125 aa5.04□□□□□ -1.6
LRCH3-219ENST00000494069 KRTAP9-3Q9BYQ3 159 aa5.04□□□□□ -1.6
LRCH3-219ENST00000494069 CHTOPQ9Y3Y2 248 aaKnown RBP5.04□□□□□ -1.6
LRCH3-219ENST00000494069 A0A0U1RRA0 63 aa5.03□□□□□ -1.6
LRCH3-219ENST00000494069 TMEM238C9JI98 176 aa5.03□□□□□ -1.6
LRCH3-219ENST00000494069 CBLN2Q8IUK8 224 aa5.03□□□□□ -1.6
LRCH3-219ENST00000494069 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
LRCH3-219ENST00000494069 MUC2Q02817 5179 aa5.02□□□□□ -1.61
LRCH3-219ENST00000494069 TMEM223A0PJW6 202 aa5.02□□□□□ -1.61
LRCH3-219ENST00000494069 UBE2AP49459 152 aa5.02□□□□□ -1.61
LRCH3-219ENST00000494069 PRLHP81277 87 aa5.02□□□□□ -1.61
LRCH3-219ENST00000494069 PRR4Q16378 134 aa5.02□□□□□ -1.61
LRCH3-219ENST00000494069 KRTAP13-2Q52LG2 175 aa5.02□□□□□ -1.61
LRCH3-219ENST00000494069 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
LRCH3-219ENST00000494069 FAM19A2Q8N3H0 131 aa5.02□□□□□ -1.61
LRCH3-219ENST00000494069 IFI27L1Q96BM0 104 aa5.02□□□□□ -1.61
LRCH3-219ENST00000494069 TRAV12-1A0A0B4J245 112 aa5.01□□□□□ -1.61
LRCH3-219ENST00000494069 M0R378 163 aa5.01□□□□□ -1.61
LRCH3-219ENST00000494069 CRYGAP11844 174 aa5.01□□□□□ -1.61
LRCH3-219ENST00000494069 LINC00158P58513 81 aa5.01□□□□□ -1.61
LRCH3-219ENST00000494069 COX17Q14061 63 aa5.01□□□□□ -1.61
LRCH3-219ENST00000494069 TYMSOSQ8TAI1 123 aa5.01□□□□□ -1.61
LRCH3-219ENST00000494069 CHCHD1Q96BP2 118 aaKnown RBP5.01□□□□□ -1.61
LRCH3-219ENST00000494069 RPL24P83731 157 aaKnown RBP5□□□□□ -1.61
LRCH3-219ENST00000494069 FAM19A1Q7Z5A9 133 aa5□□□□□ -1.61
LRCH3-219ENST00000494069 TMEM126AQ9H061 195 aa5□□□□□ -1.61
LRCH3-219ENST00000494069 H0Y8G0 127 aa4.99□□□□□ -1.61
LRCH3-219ENST00000494069 TRGC2P03986 189 aa4.99□□□□□ -1.61
LRCH3-219ENST00000494069 SMIM13P0DJ93 91 aa4.99□□□□□ -1.61
LRCH3-219ENST00000494069 HSBP1O75506 76 aa4.98□□□□□ -1.61
LRCH3-219ENST00000494069 SLC7A5P1Q8MH63 180 aa4.98□□□□□ -1.61
LRCH3-219ENST00000494069 SERF1AO75920 110 aa4.97□□□□□ -1.61
LRCH3-219ENST00000494069 TSPEAR-AS2P59090 65 aa4.97□□□□□ -1.61
LRCH3-219ENST00000494069 MEIG1Q5JSS6 88 aa4.97□□□□□ -1.61
LRCH3-219ENST00000494069 SFTA2Q6UW10 78 aa4.97□□□□□ -1.61
LRCH3-219ENST00000494069 MIR7-3HGQ8N6C7 128 aa4.97□□□□□ -1.61
LRCH3-219ENST00000494069 PLEKHB2Q96CS7 222 aa4.97□□□□□ -1.61
LRCH3-219ENST00000494069 NCR3O14931 201 aa4.96□□□□□ -1.62
LRCH3-219ENST00000494069 FAM229BQ4G0N7 80 aa4.96□□□□□ -1.62
LRCH3-219ENST00000494069 BOD1L2Q8IYS8 172 aa4.96□□□□□ -1.62
LRCH3-219ENST00000494069 C3orf22Q8N5N4 141 aa4.96□□□□□ -1.62
LRCH3-219ENST00000494069 RETNLBQ9BQ08 111 aa4.96□□□□□ -1.62
LRCH3-219ENST00000494069 PMCHL2Q9BQD1 86 aa4.96□□□□□ -1.62
LRCH3-219ENST00000494069 NDUFA12Q9UI09 145 aa4.96□□□□□ -1.62
LRCH3-219ENST00000494069 COLCA2A8K830 154 aa4.95□□□□□ -1.62
LRCH3-219ENST00000494069 LEPROTL1O95214 131 aa4.95□□□□□ -1.62
LRCH3-219ENST00000494069 FABP4P15090 132 aa4.95□□□□□ -1.62
LRCH3-219ENST00000494069 HIGD2AQ9BW72 106 aa4.95□□□□□ -1.62
LRCH3-219ENST00000494069 MUC17Q685J3 4493 aa4.95□□□□□ -1.62
LRCH3-219ENST00000494069 IGKV2D-26A0A0A0MRZ7 120 aa4.94□□□□□ -1.62
LRCH3-219ENST00000494069 C9orf118A6NHY6 69 aa4.94□□□□□ -1.62
LRCH3-219ENST00000494069 ATP6V1G1O75348 118 aa4.94□□□□□ -1.62
LRCH3-219ENST00000494069 HERV-K104P63124 156 aa4.94□□□□□ -1.62
LRCH3-219ENST00000494069 DAND5Q8N907 189 aa4.94□□□□□ -1.62
LRCH3-219ENST00000494069 LINC00304Q8N9R0 145 aa4.94□□□□□ -1.62
LRCH3-219ENST00000494069 MYMXA0A1B0GTQ4 84 aa4.93□□□□□ -1.62
LRCH3-219ENST00000494069 LEPROTO15243 131 aa4.93□□□□□ -1.62
LRCH3-219ENST00000494069 SPRR1AP35321 89 aa4.93□□□□□ -1.62
LRCH3-219ENST00000494069 SPRR4Q96PI1 79 aa4.93□□□□□ -1.62
LRCH3-219ENST00000494069 TRBV10-3A0A0K0K1G6 114 aa4.92□□□□□ -1.62
LRCH3-219ENST00000494069 KRTAP4-16G5E9R7 235 aaPredicted RBP4.92□□□□□ -1.62
LRCH3-219ENST00000494069 SMCR5Q8TEV8 140 aa4.92□□□□□ -1.62
LRCH3-219ENST00000494069 KCNQ1DNQ9H478 68 aa4.92□□□□□ -1.62
LRCH3-219ENST00000494069 HSPB8Q9UJY1 196 aa4.92□□□□□ -1.62
LRCH3-219ENST00000494069 FAT4Q6V0I7 4981 aa4.92□□□□□ -1.62
LRCH3-219ENST00000494069 B5MCH6 92 aa4.91□□□□□ -1.62
LRCH3-219ENST00000494069 J3QQQ9 107 aa4.91□□□□□ -1.62
LRCH3-219ENST00000494069 PRYO14603 147 aa4.91□□□□□ -1.62
LRCH3-219ENST00000494069 DPM2O94777 84 aa4.91□□□□□ -1.62
LRCH3-219ENST00000494069 PPDPFQ9H3Y8 114 aa4.91□□□□□ -1.62
LRCH3-219ENST00000494069 LINC00587B1AMM8 73 aa4.9□□□□□ -1.63
LRCH3-219ENST00000494069 ERC2-IT1O76042 136 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms