RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 SND1-IT1Q9HBX3 110 aa6.22□□□□□ -1.41
MACF1-222ENST00000494012 PLA2G2DQ9UNK4 145 aa6.22□□□□□ -1.41
MACF1-222ENST00000494012 TSPEAR-AS2P59090 65 aa6.21□□□□□ -1.42
MACF1-222ENST00000494012 SERTAD4-AS1Q5TG53 156 aa6.21□□□□□ -1.42
MACF1-222ENST00000494012 KRTAP7-1Q8IUC3 87 aa6.21□□□□□ -1.42
MACF1-222ENST00000494012 HIST1H2BLQ99880 126 aa6.21□□□□□ -1.42
MACF1-222ENST00000494012 TP73-AS1Q9UF72 201 aa6.21□□□□□ -1.42
MACF1-222ENST00000494012 RPL24P83731 157 aaKnown RBP6.2□□□□□ -1.42
MACF1-222ENST00000494012 MRPL55Q7Z7F7 128 aaKnown RBP6.2□□□□□ -1.42
MACF1-222ENST00000494012 NKAPP1Q8N9T2 125 aa6.2□□□□□ -1.42
MACF1-222ENST00000494012 PSORS1C2Q9UIG4 136 aa6.2□□□□□ -1.42
MACF1-222ENST00000494012 C22orf24Q9Y442 160 aa6.2□□□□□ -1.42
MACF1-222ENST00000494012 FAT1Q14517 4588 aa6.2□□□□□ -1.42
MACF1-222ENST00000494012 IGLV5-37A0A075B6J1 123 aa6.19□□□□□ -1.42
MACF1-222ENST00000494012 A0A0U1RRA0 63 aa6.19□□□□□ -1.42
MACF1-222ENST00000494012 SMIM13P0DJ93 91 aa6.19□□□□□ -1.42
MACF1-222ENST00000494012 FLG2Q5D862 2391 aaPredicted RBP6.18□□□□□ -1.42
MACF1-222ENST00000494012 SNRPEP62304 92 aaKnown RBP6.18□□□□□ -1.42
MACF1-222ENST00000494012 C1orf137Q5JT78 98 aa6.18□□□□□ -1.42
MACF1-222ENST00000494012 C5orf52A6NGY3 159 aa6.17□□□□□ -1.42
MACF1-222ENST00000494012 HNRNPA3P51991 378 aaKnown RBP6.17□□□□□ -1.42
MACF1-222ENST00000494012 MIR7-3HGQ8N6C7 128 aa6.17□□□□□ -1.42
MACF1-222ENST00000494012 VPS13BQ7Z7G8 4022 aa6.16□□□□□ -1.42
MACF1-222ENST00000494012 VPREB1P12018 145 aa6.16□□□□□ -1.42
MACF1-222ENST00000494012 SPINK6Q6UWN8 80 aa6.16□□□□□ -1.42
MACF1-222ENST00000494012 MIEN1Q9BRT3 115 aa6.16□□□□□ -1.42
MACF1-222ENST00000494012 A0A0J9YXY3 114 aa6.15□□□□□ -1.42
MACF1-222ENST00000494012 GAGE10A6NGK3 116 aa6.15□□□□□ -1.42
MACF1-222ENST00000494012 ZNF815PA8K554 130 aa6.15□□□□□ -1.42
MACF1-222ENST00000494012 IGLV7-43P04211 117 aa6.15□□□□□ -1.42
MACF1-222ENST00000494012 KRTAP11-1Q8IUC1 163 aa6.15□□□□□ -1.42
MACF1-222ENST00000494012 BOD1L2Q8IYS8 172 aa6.15□□□□□ -1.42
MACF1-222ENST00000494012 ATOH7Q8N100 152 aa6.15□□□□□ -1.42
MACF1-222ENST00000494012 LINC00167Q96N53 147 aa6.15□□□□□ -1.42
MACF1-222ENST00000494012 DMBT1Q9UGM3 2413 aaPredicted RBP6.15□□□□□ -1.43
MACF1-222ENST00000494012 IGKV2D-26A0A0A0MRZ7 120 aa6.14□□□□□ -1.43
MACF1-222ENST00000494012 RPL37AP8A6NKH3 93 aa6.14□□□□□ -1.43
MACF1-222ENST00000494012 HSBP1L1C9JCN9 74 aa6.14□□□□□ -1.43
MACF1-222ENST00000494012 LOC107984156A0A0G2JMH3 177 aa6.13□□□□□ -1.43
MACF1-222ENST00000494012 KRTAP29-1A8MX34 341 aaPredicted RBP6.13□□□□□ -1.43
MACF1-222ENST00000494012 TIMM17BO60830 172 aa6.13□□□□□ -1.43
MACF1-222ENST00000494012 OXTP01178 125 aa6.13□□□□□ -1.43
MACF1-222ENST00000494012 SRSF9Q13242 221 aaKnown RBP eCLIP6.13□□□□□ -1.43
MACF1-222ENST00000494012 REG3GQ6UW15 175 aa6.13□□□□□ -1.43
MACF1-222ENST00000494012 ARL17AQ8IVW1 177 aa6.13□□□□□ -1.43
MACF1-222ENST00000494012 DAND5Q8N907 189 aa6.13□□□□□ -1.43
MACF1-222ENST00000494012 IGKV2-28A0A075B6P5 120 aa6.12□□□□□ -1.43
MACF1-222ENST00000494012 M0R378 163 aa6.12□□□□□ -1.43
MACF1-222ENST00000494012 BCE1O60756 84 aa6.12□□□□□ -1.43
MACF1-222ENST00000494012 SCGB1D1O95968 90 aa6.12□□□□□ -1.43
MACF1-222ENST00000494012 IGKV2D-28P01615 120 aa6.12□□□□□ -1.43
MACF1-222ENST00000494012 ANKRD39Q53RE8 183 aa6.12□□□□□ -1.43
MACF1-222ENST00000494012 SCGB1D4Q6XE38 83 aa6.12□□□□□ -1.43
MACF1-222ENST00000494012 Q8NDZ9 215 aa6.12□□□□□ -1.43
MACF1-222ENST00000494012 DIRC1Q969H9 104 aa6.12□□□□□ -1.43
MACF1-222ENST00000494012 IGLV1-50A0A075B6I6 118 aa6.11□□□□□ -1.43
MACF1-222ENST00000494012 TMEM238C9JI98 176 aa6.11□□□□□ -1.43
MACF1-222ENST00000494012 RPL28P46779 137 aaKnown RBP6.11□□□□□ -1.43
MACF1-222ENST00000494012 NCR3O14931 201 aa6.1□□□□□ -1.43
MACF1-222ENST00000494012 S100A12P80511 92 aa6.1□□□□□ -1.43
MACF1-222ENST00000494012 ADAMTSL4-AS1Q5T5F5 129 aa6.1□□□□□ -1.43
MACF1-222ENST00000494012 TTTY13Q9BZ97 58 aa6.1□□□□□ -1.43
MACF1-222ENST00000494012 SPANXB1Q9NS25 103 aaPredicted RBP6.1□□□□□ -1.43
MACF1-222ENST00000494012 MYCBP2O75592 4640 aa6.09□□□□□ -1.43
MACF1-222ENST00000494012 TRBV10-2A0A0K0K1G8 114 aa6.09□□□□□ -1.43
MACF1-222ENST00000494012 H0Y9J4 135 aa6.09□□□□□ -1.43
MACF1-222ENST00000494012 ZNF861PO60384 105 aa6.09□□□□□ -1.43
MACF1-222ENST00000494012 NDUFC2O95298 119 aa6.09□□□□□ -1.43
MACF1-222ENST00000494012 NPC2P61916 151 aa6.09□□□□□ -1.43
MACF1-222ENST00000494012 COPS9Q8WXC6 57 aa6.09□□□□□ -1.43
MACF1-222ENST00000494012 LITAFQ99732 161 aa6.09□□□□□ -1.43
MACF1-222ENST00000494012 TMEM126AQ9H061 195 aa6.09□□□□□ -1.43
MACF1-222ENST00000494012 UBE2AP49459 152 aa6.08□□□□□ -1.44
MACF1-222ENST00000494012 PCP2Q8IVA1 136 aa6.08□□□□□ -1.44
MACF1-222ENST00000494012 LINC00308Q8TCZ7 52 aa6.08□□□□□ -1.44
MACF1-222ENST00000494012 SPANXCQ9NY87 97 aa6.08□□□□□ -1.44
MACF1-222ENST00000494012 PRYO14603 147 aa6.07□□□□□ -1.44
MACF1-222ENST00000494012 SOSTDC1Q6X4U4 206 aa6.07□□□□□ -1.44
MACF1-222ENST00000494012 Q6ZVH6 145 aa6.07□□□□□ -1.44
MACF1-222ENST00000494012 LINC01600Q96MT4 127 aa6.07□□□□□ -1.44
MACF1-222ENST00000494012 SPANXDQ9BXN6 97 aa6.07□□□□□ -1.44
MACF1-222ENST00000494012 TMA7Q9Y2S6 64 aaKnown RBP6.07□□□□□ -1.44
MACF1-222ENST00000494012 TRBV10-3A0A0K0K1G6 114 aa6.06□□□□□ -1.44
MACF1-222ENST00000494012 DDTP30046 118 aa6.06□□□□□ -1.44
MACF1-222ENST00000494012 S100A7L2Q5SY68 101 aa6.06□□□□□ -1.44
MACF1-222ENST00000494012 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
MACF1-222ENST00000494012 FAM19A1Q7Z5A9 133 aa6.06□□□□□ -1.44
MACF1-222ENST00000494012 KCNQ1DNQ9H478 68 aa6.06□□□□□ -1.44
MACF1-222ENST00000494012 CBY1Q9Y3M2 126 aa6.06□□□□□ -1.44
MACF1-222ENST00000494012 A6NJY4 79 aa6.05□□□□□ -1.44
MACF1-222ENST00000494012 IFITM1P13164 125 aa6.05□□□□□ -1.44
MACF1-222ENST00000494012 PPDPFQ9H3Y8 114 aa6.05□□□□□ -1.44
MACF1-222ENST00000494012 EIF4EBP3O60516 100 aaPredicted RBP6.04□□□□□ -1.44
MACF1-222ENST00000494012 IGLV6-57P01721 117 aa6.04□□□□□ -1.44
MACF1-222ENST00000494012 PRLHP81277 87 aa6.04□□□□□ -1.44
MACF1-222ENST00000494012 JOSD1Q15040 202 aaPredicted RBP6.04□□□□□ -1.44
MACF1-222ENST00000494012 KRTAP13-1Q8IUC0 172 aa6.04□□□□□ -1.44
MACF1-222ENST00000494012 LINC00337Q8N6G1 96 aa6.04□□□□□ -1.44
MACF1-222ENST00000494012 ETDCA0A1B0GVM5 59 aa6.03□□□□□ -1.44
MACF1-222ENST00000494012 SPRR1AP35321 89 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms