RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 A0A096LNI7 61 aa14.15□□□□□ -0.14
PSPC1-204ENST00000492741 M0R143 59 aa14.14□□□□□ -0.15
PSPC1-204ENST00000492741 C9orf129Q5T035 196 aaKnown RBP14.13□□□□□ -0.15
PSPC1-204ENST00000492741 FXYD2P54710 66 aa14.12□□□□□ -0.15
PSPC1-204ENST00000492741 LOC107984156A0A0G2JMH3 177 aa14.12□□□□□ -0.15
PSPC1-204ENST00000492741 TMEM238LA0A1B0GVL6 79 aa14.12□□□□□ -0.15
PSPC1-204ENST00000492741 A4D1N5 150 aa14.12□□□□□ -0.15
PSPC1-204ENST00000492741 A6NJY4 79 aa14.12□□□□□ -0.15
PSPC1-204ENST00000492741 BATFQ16520 125 aa14.12□□□□□ -0.15
PSPC1-204ENST00000492741 BVES-AS1Q5T3Y7 98 aa14.12□□□□□ -0.15
PSPC1-204ENST00000492741 ARL17AQ8IVW1 177 aa14.12□□□□□ -0.15
PSPC1-204ENST00000492741 DPH3Q96FX2 82 aa14.12□□□□□ -0.15
PSPC1-204ENST00000492741 HECTD4Q9Y4D8 3996 aa14.1□□□□□ -0.15
PSPC1-204ENST00000492741 CHTF8P0CG12 524 aa14.1□□□□□ -0.15
PSPC1-204ENST00000492741 LINC00474Q9P2X8 69 aa14.1□□□□□ -0.15
PSPC1-204ENST00000492741 PPDPFQ9H3Y8 114 aa14.1□□□□□ -0.15
PSPC1-204ENST00000492741 FAT2Q9NYQ8 4349 aa14.09□□□□□ -0.15
PSPC1-204ENST00000492741 A0A1B0GVY2 172 aa14.06□□□□□ -0.16
PSPC1-204ENST00000492741 NDUFC2O95298 119 aa14.06□□□□□ -0.16
PSPC1-204ENST00000492741 PRR3P79522 188 aaKnown RBP14.06□□□□□ -0.16
PSPC1-204ENST00000492741 NHP2Q9NX24 153 aaKnown RBP14.06□□□□□ -0.16
PSPC1-204ENST00000492741 FAM168BA1KXE4 195 aa14.05□□□□□ -0.16
PSPC1-204ENST00000492741 FAM19A5Q7Z5A7 132 aaPredicted RBP14.04□□□□□ -0.16
PSPC1-204ENST00000492741 Q8NDZ9 215 aa14.04□□□□□ -0.16
PSPC1-204ENST00000492741 NCR3O14931 201 aa14.04□□□□□ -0.16
PSPC1-204ENST00000492741 NKAPP1Q8N9T2 125 aa14.04□□□□□ -0.16
PSPC1-204ENST00000492741 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.04□□□□□ -0.16
PSPC1-204ENST00000492741 A6NDN8 102 aa14.03□□□□□ -0.16
PSPC1-204ENST00000492741 CFC1BP0CG36 223 aa14.03□□□□□ -0.16
PSPC1-204ENST00000492741 CFC1P0CG37 223 aa14.03□□□□□ -0.16
PSPC1-204ENST00000492741 SERTAD4-AS1Q5TG53 156 aa14.03□□□□□ -0.16
PSPC1-204ENST00000492741 RAB37Q96AX2 223 aa14.03□□□□□ -0.16
PSPC1-204ENST00000492741 PANO1I0J062 215 aa14.02□□□□□ -0.16
PSPC1-204ENST00000492741 VPREB1P12018 145 aa14.02□□□□□ -0.16
PSPC1-204ENST00000492741 PLA2G2DQ9UNK4 145 aa14.02□□□□□ -0.16
PSPC1-204ENST00000492741 SPACA4Q8TDM5 124 aa14.01□□□□□ -0.17
PSPC1-204ENST00000492741 DNAH11Q96DT5 4516 aa14.01□□□□□ -0.17
PSPC1-204ENST00000492741 SNHG12Q9BXW3 62 aa14.01□□□□□ -0.17
PSPC1-204ENST00000492741 IGKV2-28A0A075B6P5 120 aa14□□□□□ -0.17
PSPC1-204ENST00000492741 A0A1W2PNN7 141 aa14□□□□□ -0.17
PSPC1-204ENST00000492741 IGKV2D-28P01615 120 aa14□□□□□ -0.17
PSPC1-204ENST00000492741 KRTAP10-1P60331 282 aa14□□□□□ -0.17
PSPC1-204ENST00000492741 OR13C6PQ8NH95 151 aa14□□□□□ -0.17
PSPC1-204ENST00000492741 PKD1P98161 4303 aa13.99□□□□□ -0.17
PSPC1-204ENST00000492741 TRAV13-2A0A0B4J235 113 aa13.98□□□□□ -0.17
PSPC1-204ENST00000492741 RYR3Q15413 4870 aa13.98□□□□□ -0.17
PSPC1-204ENST00000492741 A0A0B4J2C4 111 aa13.98□□□□□ -0.17
PSPC1-204ENST00000492741 K7ERJ3 54 aa13.98□□□□□ -0.17
PSPC1-204ENST00000492741 S100A7L2Q5SY68 101 aa13.98□□□□□ -0.17
PSPC1-204ENST00000492741 C22orf24Q9Y442 160 aa13.98□□□□□ -0.17
PSPC1-204ENST00000492741 TRBV10-2A0A0K0K1G8 114 aa13.97□□□□□ -0.17
PSPC1-204ENST00000492741 M0R378 163 aa13.97□□□□□ -0.17
PSPC1-204ENST00000492741 A0A087WYN8 130 aa13.96□□□□□ -0.17
PSPC1-204ENST00000492741 KRTAP7-1Q8IUC3 87 aa13.96□□□□□ -0.17
PSPC1-204ENST00000492741 LINC00337Q8N6G1 96 aa13.96□□□□□ -0.17
PSPC1-204ENST00000492741 M0QXV9 152 aa13.95□□□□□ -0.18
PSPC1-204ENST00000492741 PRO1854Q9UHT4 67 aa13.95□□□□□ -0.18
PSPC1-204ENST00000492741 IGLV5-37A0A075B6J1 123 aa13.95□□□□□ -0.18
PSPC1-204ENST00000492741 GAGE10A6NGK3 116 aa13.95□□□□□ -0.18
PSPC1-204ENST00000492741 FAM30AQ9NZY2 134 aa13.95□□□□□ -0.18
PSPC1-204ENST00000492741 A0A1B0GWB2 263 aa13.94□□□□□ -0.18
PSPC1-204ENST00000492741 H7C2G1 150 aa13.93□□□□□ -0.18
PSPC1-204ENST00000492741 RPL13AP40429 203 aaKnown RBP13.93□□□□□ -0.18
PSPC1-204ENST00000492741 MRPL55Q7Z7F7 128 aaKnown RBP13.93□□□□□ -0.18
PSPC1-204ENST00000492741 TMEM126AQ9H061 195 aa13.93□□□□□ -0.18
PSPC1-204ENST00000492741 C7orf33Q8WU49 177 aa13.92□□□□□ -0.18
PSPC1-204ENST00000492741 LBHQ53QV2 105 aaPredicted RBP13.91□□□□□ -0.18
PSPC1-204ENST00000492741 Q1RN00 199 aa13.9□□□□□ -0.18
PSPC1-204ENST00000492741 LINC00167Q96N53 147 aa13.9□□□□□ -0.18
PSPC1-204ENST00000492741 TRBV10-3A0A0K0K1G6 114 aa13.9□□□□□ -0.18
PSPC1-204ENST00000492741 COL5A1-AS1Q5SY13 56 aa13.9□□□□□ -0.18
PSPC1-204ENST00000492741 Q6ZSA8 131 aa13.9□□□□□ -0.18
PSPC1-204ENST00000492741 PHF5AQ7RTV0 110 aaKnown RBP13.9□□□□□ -0.18
PSPC1-204ENST00000492741 PLAC8Q9NZF1 115 aa13.9□□□□□ -0.18
PSPC1-204ENST00000492741 DNAH5Q8TE73 4624 aa13.89□□□□□ -0.19
PSPC1-204ENST00000492741 RPL37AP8A6NKH3 93 aa13.89□□□□□ -0.19
PSPC1-204ENST00000492741 IGLV6-57P01721 117 aa13.87□□□□□ -0.19
PSPC1-204ENST00000492741 UBE2BP63146 152 aa13.87□□□□□ -0.19
PSPC1-204ENST00000492741 CIRBP-AS1Q8TBR5 109 aa13.86□□□□□ -0.19
PSPC1-204ENST00000492741 SCXQ7RTU7 201 aa13.85□□□□□ -0.19
PSPC1-204ENST00000492741 HAMPP81172 84 aa13.84□□□□□ -0.19
PSPC1-204ENST00000492741 IGLV1-50A0A075B6I6 118 aa13.84□□□□□ -0.19
PSPC1-204ENST00000492741 EPM2AB3EWF7 344 aa13.84□□□□□ -0.19
PSPC1-204ENST00000492741 CBY1Q9Y3M2 126 aa13.84□□□□□ -0.19
PSPC1-204ENST00000492741 TSPAN13O95857 204 aa13.83□□□□□ -0.2
PSPC1-204ENST00000492741 PKHD1P08F94 4074 aa13.82□□□□□ -0.2
PSPC1-204ENST00000492741 TRAV23DV6A0A075B6W5 121 aa13.82□□□□□ -0.2
PSPC1-204ENST00000492741 SMIM11BQ8TCY0 68 aa13.82□□□□□ -0.2
PSPC1-204ENST00000492741 PSMB2P49721 201 aa13.81□□□□□ -0.2
PSPC1-204ENST00000492741 TAX1BP3O14907 124 aa13.81□□□□□ -0.2
PSPC1-204ENST00000492741 NAA38Q9BRA0 125 aaKnown RBP13.8□□□□□ -0.2
PSPC1-204ENST00000492741 KCNQ1DNQ9H478 68 aa13.78□□□□□ -0.2
PSPC1-204ENST00000492741 RPL28P46779 137 aaKnown RBP13.78□□□□□ -0.2
PSPC1-204ENST00000492741 C9orf118A6NHY6 69 aa13.76□□□□□ -0.21
PSPC1-204ENST00000492741 H3BUT2 72 aa13.76□□□□□ -0.21
PSPC1-204ENST00000492741 PRYO14603 147 aa13.76□□□□□ -0.21
PSPC1-204ENST00000492741 ZNF73O43830 326 aaPredicted RBP13.76□□□□□ -0.21
PSPC1-204ENST00000492741 C6orf99Q4VX62 202 aa13.76□□□□□ -0.21
PSPC1-204ENST00000492741 REG3GQ6UW15 175 aa13.76□□□□□ -0.21
PSPC1-204ENST00000492741 DIRC1Q969H9 104 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms