RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 A0A1W2PNN7 141 aa9.39□□□□□ -0.91
CDC42SE1-205ENST00000491825 PLA2G2DQ9UNK4 145 aa9.39□□□□□ -0.91
CDC42SE1-205ENST00000491825 LINC00587B1AMM8 73 aa9.38□□□□□ -0.91
CDC42SE1-205ENST00000491825 PFN2P35080 140 aa9.38□□□□□ -0.91
CDC42SE1-205ENST00000491825 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
CDC42SE1-205ENST00000491825 ATOH7Q8N100 152 aa9.37□□□□□ -0.91
CDC42SE1-205ENST00000491825 IGKV2D-26A0A0A0MRZ7 120 aa9.36□□□□□ -0.91
CDC42SE1-205ENST00000491825 FAM168BA1KXE4 195 aa9.36□□□□□ -0.91
CDC42SE1-205ENST00000491825 KRTAP7-1Q8IUC3 87 aa9.36□□□□□ -0.91
CDC42SE1-205ENST00000491825 TMA7Q9Y2S6 64 aaKnown RBP9.36□□□□□ -0.91
CDC42SE1-205ENST00000491825 MEIG1Q5JSS6 88 aa9.35□□□□□ -0.91
CDC42SE1-205ENST00000491825 FAM19A5Q7Z5A7 132 aaPredicted RBP9.35□□□□□ -0.91
CDC42SE1-205ENST00000491825 C7orf33Q8WU49 177 aa9.35□□□□□ -0.91
CDC42SE1-205ENST00000491825 SND1-IT1Q9HBX3 110 aa9.35□□□□□ -0.91
CDC42SE1-205ENST00000491825 SMIM13P0DJ93 91 aa9.34□□□□□ -0.91
CDC42SE1-205ENST00000491825 LINC00158P58513 81 aa9.34□□□□□ -0.91
CDC42SE1-205ENST00000491825 ANKRD39Q53RE8 183 aa9.34□□□□□ -0.91
CDC42SE1-205ENST00000491825 M0QXV9 152 aa9.33□□□□□ -0.92
CDC42SE1-205ENST00000491825 IGLV5-37A0A075B6J1 123 aa9.32□□□□□ -0.92
CDC42SE1-205ENST00000491825 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
CDC42SE1-205ENST00000491825 SCGB1D1O95968 90 aa9.32□□□□□ -0.92
CDC42SE1-205ENST00000491825 TP73-AS1Q9UF72 201 aa9.32□□□□□ -0.92
CDC42SE1-205ENST00000491825 ZNF815PA8K554 130 aa9.31□□□□□ -0.92
CDC42SE1-205ENST00000491825 MIR7-3HGQ8N6C7 128 aa9.31□□□□□ -0.92
CDC42SE1-205ENST00000491825 LRP2P98164 4655 aa9.3□□□□□ -0.92
CDC42SE1-205ENST00000491825 A0A0U1RRA0 63 aa9.3□□□□□ -0.92
CDC42SE1-205ENST00000491825 HSBP1L1C9JCN9 74 aa9.3□□□□□ -0.92
CDC42SE1-205ENST00000491825 TIMM17BO60830 172 aa9.3□□□□□ -0.92
CDC42SE1-205ENST00000491825 PHF5AQ7RTV0 110 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-205ENST00000491825 LOC107984156A0A0G2JMH3 177 aa9.29□□□□□ -0.92
CDC42SE1-205ENST00000491825 JOSD1Q15040 202 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE1-205ENST00000491825 ARL17AQ8IVW1 177 aa9.29□□□□□ -0.92
CDC42SE1-205ENST00000491825 TTTY13Q9BZ97 58 aa9.29□□□□□ -0.92
CDC42SE1-205ENST00000491825 C22orf24Q9Y442 160 aa9.29□□□□□ -0.92
CDC42SE1-205ENST00000491825 VPREB1P12018 145 aa9.28□□□□□ -0.92
CDC42SE1-205ENST00000491825 PRR3P79522 188 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-205ENST00000491825 RPL24P83731 157 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-205ENST00000491825 LBHQ53QV2 105 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-205ENST00000491825 MRPL55Q7Z7F7 128 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-205ENST00000491825 LITAFQ99732 161 aa9.27□□□□□ -0.93
CDC42SE1-205ENST00000491825 PCP2Q8IVA1 136 aa9.26□□□□□ -0.93
CDC42SE1-205ENST00000491825 DAND5Q8N907 189 aa9.26□□□□□ -0.93
CDC42SE1-205ENST00000491825 NKAPP1Q8N9T2 125 aa9.26□□□□□ -0.93
CDC42SE1-205ENST00000491825 Q8NDZ9 215 aa9.26□□□□□ -0.93
CDC42SE1-205ENST00000491825 ADAMTSL4-AS1Q5T5F5 129 aa9.25□□□□□ -0.93
CDC42SE1-205ENST00000491825 UBE2BP63146 152 aa9.24□□□□□ -0.93
CDC42SE1-205ENST00000491825 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
CDC42SE1-205ENST00000491825 BOD1L2Q8IYS8 172 aa9.24□□□□□ -0.93
CDC42SE1-205ENST00000491825 MIEN1Q9BRT3 115 aa9.24□□□□□ -0.93
CDC42SE1-205ENST00000491825 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
CDC42SE1-205ENST00000491825 TMEM238C9JI98 176 aa9.23□□□□□ -0.93
CDC42SE1-205ENST00000491825 SCGB1D4Q6XE38 83 aa9.23□□□□□ -0.93
CDC42SE1-205ENST00000491825 LINC01600Q96MT4 127 aa9.23□□□□□ -0.93
CDC42SE1-205ENST00000491825 PYY3Q5JQD4 70 aa9.22□□□□□ -0.93
CDC42SE1-205ENST00000491825 LINC00167Q96N53 147 aa9.22□□□□□ -0.93
CDC42SE1-205ENST00000491825 NDUFC2O95298 119 aa9.21□□□□□ -0.94
CDC42SE1-205ENST00000491825 SOSTDC1Q6X4U4 206 aa9.21□□□□□ -0.94
CDC42SE1-205ENST00000491825 VAMP8Q9BV40 100 aa9.21□□□□□ -0.94
CDC42SE1-205ENST00000491825 SPANXDQ9BXN6 97 aa9.21□□□□□ -0.94
CDC42SE1-205ENST00000491825 PPDPFQ9H3Y8 114 aa9.21□□□□□ -0.94
CDC42SE1-205ENST00000491825 SPANXCQ9NY87 97 aa9.21□□□□□ -0.94
CDC42SE1-205ENST00000491825 Q6ZVH6 145 aa9.2□□□□□ -0.94
CDC42SE1-205ENST00000491825 LINC00308Q8TCZ7 52 aa9.2□□□□□ -0.94
CDC42SE1-205ENST00000491825 M0R378 163 aa9.19□□□□□ -0.94
CDC42SE1-205ENST00000491825 DLEU1O43261 78 aa9.19□□□□□ -0.94
CDC42SE1-205ENST00000491825 COX8AP10176 69 aa9.19□□□□□ -0.94
CDC42SE1-205ENST00000491825 SPANXB1Q9NS25 103 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-205ENST00000491825 IGLV1-50A0A075B6I6 118 aa9.18□□□□□ -0.94
CDC42SE1-205ENST00000491825 TRBV10-2A0A0K0K1G8 114 aa9.18□□□□□ -0.94
CDC42SE1-205ENST00000491825 GAGE10A6NGK3 116 aa9.18□□□□□ -0.94
CDC42SE1-205ENST00000491825 EIF4EBP3O60516 100 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-205ENST00000491825 SPATA45Q537H7 98 aa9.18□□□□□ -0.94
CDC42SE1-205ENST00000491825 C1orf137Q5JT78 98 aa9.18□□□□□ -0.94
CDC42SE1-205ENST00000491825 RNF213Q63HN8 5207 aa9.18□□□□□ -0.94
CDC42SE1-205ENST00000491825 COPS9Q8WXC6 57 aa9.18□□□□□ -0.94
CDC42SE1-205ENST00000491825 PAM16Q9Y3D7 125 aa9.18□□□□□ -0.94
CDC42SE1-205ENST00000491825 RPL37AP8A6NKH3 93 aa9.17□□□□□ -0.94
CDC42SE1-205ENST00000491825 NPC2P61916 151 aa9.17□□□□□ -0.94
CDC42SE1-205ENST00000491825 SRSF9Q13242 221 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDC42SE1-205ENST00000491825 SPINK6Q6UWN8 80 aa9.17□□□□□ -0.94
CDC42SE1-205ENST00000491825 IGKV2-28A0A075B6P5 120 aa9.16□□□□□ -0.94
CDC42SE1-205ENST00000491825 NCR3O14931 201 aa9.16□□□□□ -0.94
CDC42SE1-205ENST00000491825 IGKV2D-28P01615 120 aa9.16□□□□□ -0.94
CDC42SE1-205ENST00000491825 IGLV7-43P04211 117 aa9.16□□□□□ -0.94
CDC42SE1-205ENST00000491825 IFITM1P13164 125 aa9.16□□□□□ -0.94
CDC42SE1-205ENST00000491825 KRTAP10-8P60410 259 aa9.16□□□□□ -0.94
CDC42SE1-205ENST00000491825 BCE1O60756 84 aa9.14□□□□□ -0.95
CDC42SE1-205ENST00000491825 TRBV10-3A0A0K0K1G6 114 aa9.12□□□□□ -0.95
CDC42SE1-205ENST00000491825 PRYO14603 147 aa9.12□□□□□ -0.95
CDC42SE1-205ENST00000491825 IGLV6-57P01721 117 aa9.12□□□□□ -0.95
CDC42SE1-205ENST00000491825 REG3GQ6UW15 175 aa9.12□□□□□ -0.95
CDC42SE1-205ENST00000491825 C14orf144Q96I85 54 aa9.12□□□□□ -0.95
CDC42SE1-205ENST00000491825 TMEM126AQ9H061 195 aa9.12□□□□□ -0.95
CDC42SE1-205ENST00000491825 KCNQ1DNQ9H478 68 aa9.12□□□□□ -0.95
CDC42SE1-205ENST00000491825 SLC25A34Q6PIV7 304 aa9.11□□□□□ -0.95
CDC42SE1-205ENST00000491825 ZNF861PO60384 105 aa9.1□□□□□ -0.95
CDC42SE1-205ENST00000491825 DDTP30046 118 aa9.1□□□□□ -0.95
CDC42SE1-205ENST00000491825 SPRR1AP35321 89 aa9.1□□□□□ -0.95
CDC42SE1-205ENST00000491825 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
CDC42SE1-205ENST00000491825 MUSTN1Q8IVN3 82 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms