RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 SMCR5Q8TEV8 140 aa15.43■□□□□ 0.06
USF3-203ENST00000491165 IMUPQ9GZP8 106 aa15.43■□□□□ 0.06
USF3-203ENST00000491165 NUPR2A6NF83 97 aa15.43■□□□□ 0.06
USF3-203ENST00000491165 CCDC179H3BU77 68 aa15.43■□□□□ 0.06
USF3-203ENST00000491165 LINC00643Q86TS7 51 aa15.43■□□□□ 0.06
USF3-203ENST00000491165 APLNQ9ULZ1 77 aa15.41■□□□□ 0.06
USF3-203ENST00000491165 ESRGQ1W209 222 aa15.4■□□□□ 0.06
USF3-203ENST00000491165 LYPD5Q6UWN5 251 aa15.4■□□□□ 0.06
USF3-203ENST00000491165 SDIM1Q6ZPB5 146 aa15.4■□□□□ 0.06
USF3-203ENST00000491165 Q8IZM0 81 aa15.4■□□□□ 0.06
USF3-203ENST00000491165 OR13C6PQ8NH95 151 aa15.39■□□□□ 0.05
USF3-203ENST00000491165 GAGE2AQ6NT46 116 aa15.38■□□□□ 0.05
USF3-203ENST00000491165 CLPSL2Q6UWE3 100 aa15.38■□□□□ 0.05
USF3-203ENST00000491165 LINC01561Q8N1V8 128 aa15.38■□□□□ 0.05
USF3-203ENST00000491165 SS18L2Q9UHA2 77 aa15.38■□□□□ 0.05
USF3-203ENST00000491165 KLK5Q9Y337 293 aaPredicted RBP15.36■□□□□ 0.05
USF3-203ENST00000491165 LECT2O14960 151 aa15.35■□□□□ 0.05
USF3-203ENST00000491165 VPS13DQ5THJ4 4388 aa15.34■□□□□ 0.05
USF3-203ENST00000491165 CASC10Q5T4H9 136 aa15.34■□□□□ 0.05
USF3-203ENST00000491165 FAM236AA0A1B0GUQ0 79 aa15.33■□□□□ 0.04
USF3-203ENST00000491165 FAM236BA0A1B0GV22 79 aa15.33■□□□□ 0.04
USF3-203ENST00000491165 Q8N3U1 123 aa15.33■□□□□ 0.04
USF3-203ENST00000491165 LINC00588Q9Y4M8 146 aa15.33■□□□□ 0.04
USF3-203ENST00000491165 KMT2AQ03164 3969 aa15.33■□□□□ 0.04
USF3-203ENST00000491165 LELP1Q5T871 98 aa15.31■□□□□ 0.04
USF3-203ENST00000491165 WFDC10BQ8IUB3 73 aa15.31■□□□□ 0.04
USF3-203ENST00000491165 OBSCN-AS1Q96MR7 158 aa15.31■□□□□ 0.04
USF3-203ENST00000491165 C9orf129Q5T035 196 aaKnown RBP15.3■□□□□ 0.04
USF3-203ENST00000491165 LINC00269Q8N2A0 174 aa15.3■□□□□ 0.04
USF3-203ENST00000491165 CD164L2Q6UWJ8 174 aa15.29■□□□□ 0.04
USF3-203ENST00000491165 C14orf132Q9NPU4 83 aa15.29■□□□□ 0.04
USF3-203ENST00000491165 CXCL5P42830 114 aa15.29■□□□□ 0.04
USF3-203ENST00000491165 CFAP161Q6P656 301 aa15.28■□□□□ 0.04
USF3-203ENST00000491165 COX17Q14061 63 aa15.27■□□□□ 0.04
USF3-203ENST00000491165 KIAA0087Q14695 138 aa15.27■□□□□ 0.04
USF3-203ENST00000491165 CHCHD10Q8WYQ3 142 aaPredicted RBP15.26■□□□□ 0.03
USF3-203ENST00000491165 ORMDL1Q9P0S3 153 aa15.26■□□□□ 0.03
USF3-203ENST00000491165 SLPIP03973 132 aa15.25■□□□□ 0.03
USF3-203ENST00000491165 NDUFC2O95298 119 aa15.25■□□□□ 0.03
USF3-203ENST00000491165 ANGP03950 147 aaKnown RBP15.25■□□□□ 0.03
USF3-203ENST00000491165 C3orf84H3BNL1 204 aa15.24■□□□□ 0.03
USF3-203ENST00000491165 REG3AQ06141 175 aa15.24■□□□□ 0.03
USF3-203ENST00000491165 IGLV10-54A0A075B6I4 117 aa15.23■□□□□ 0.03
USF3-203ENST00000491165 NCR3O14931 201 aa15.23■□□□□ 0.03
USF3-203ENST00000491165 PRR3P79522 188 aaKnown RBP15.22■□□□□ 0.03
USF3-203ENST00000491165 A0A1B0GX51 115 aa15.22■□□□□ 0.03
USF3-203ENST00000491165 LINC00167Q96N53 147 aa15.21■□□□□ 0.03
USF3-203ENST00000491165 TMEM126AQ9H061 195 aa15.2■□□□□ 0.02
USF3-203ENST00000491165 UPK3BQ9BT76 320 aa15.2■□□□□ 0.02
USF3-203ENST00000491165 DNAH10Q8IVF4 4471 aa15.19■□□□□ 0.02
USF3-203ENST00000491165 HYDINQ4G0P3 5121 aa15.19■□□□□ 0.02
USF3-203ENST00000491165 UBE2DNLQ8IWF7 75 aa15.18■□□□□ 0.02
USF3-203ENST00000491165 Q8N814 137 aa15.18■□□□□ 0.02
USF3-203ENST00000491165 C9orf116Q5BN46 136 aaPredicted RBP15.17■□□□□ 0.02
USF3-203ENST00000491165 LINC00846Q9NV44 126 aa15.17■□□□□ 0.02
USF3-203ENST00000491165 ALMS1Q8TCU4 4167 aa15.17■□□□□ 0.02
USF3-203ENST00000491165 SACSQ9NZJ4 4579 aa15.17■□□□□ 0.02
USF3-203ENST00000491165 Q6JHZ5 121 aa15.15■□□□□ 0.02
USF3-203ENST00000491165 DNAH10OSP0CZ25 163 aa15.14■□□□□ 0.01
USF3-203ENST00000491165 LINC01556Q5JQF7 62 aa15.14■□□□□ 0.01
USF3-203ENST00000491165 KMT2CQ8NEZ4 4911 aaKnown RBP15.13■□□□□ 0.01
USF3-203ENST00000491165 JMJD7-PLA2G4BH0Y9G9 81 aa15.13■□□□□ 0.01
USF3-203ENST00000491165 TMEM256-PLSCR3K7ERE1 68 aa15.13■□□□□ 0.01
USF3-203ENST00000491165 C3orf22Q8N5N4 141 aa15.13■□□□□ 0.01
USF3-203ENST00000491165 CCKP06307 115 aa15.12■□□□□ 0.01
USF3-203ENST00000491165 HIST1H4AP62805 103 aaKnown RBP15.12■□□□□ 0.01
USF3-203ENST00000491165 KRTAP1-5Q9BYS1 174 aa15.12■□□□□ 0.01
USF3-203ENST00000491165 DNAH2Q9P225 4427 aa15.12■□□□□ 0.01
USF3-203ENST00000491165 KLK12Q9UKR0 248 aa15.11■□□□□ 0.01
USF3-203ENST00000491165 UQCRQO14949 82 aa15.11■□□□□ 0.01
USF3-203ENST00000491165 SPAG11BQ08648 103 aa15.1■□□□□ 0.01
USF3-203ENST00000491165 Q8NDZ9 215 aa15.1■□□□□ 0.01
USF3-203ENST00000491165 IGKV3D-7A0A0C4DH55 119 aa15.1■□□□□ 0.01
USF3-203ENST00000491165 C6orf99Q4VX62 202 aa15.1■□□□□ 0.01
USF3-203ENST00000491165 S100A7L2Q5SY68 101 aa15.1■□□□□ 0.01
USF3-203ENST00000491165 LINC00476Q8WZB0 136 aa15.1■□□□□ 0.01
USF3-203ENST00000491165 LY6G6CO95867 125 aa15.08■□□□□ 0.01
USF3-203ENST00000491165 C9orf153Q5TBE3 101 aa15.08■□□□□ 0.01
USF3-203ENST00000491165 ATOX1O00244 68 aa15.08■□□□□ 0
USF3-203ENST00000491165 C10orf25Q5T742 122 aa15.08■□□□□ 0
USF3-203ENST00000491165 UNQ6190/PRO20217Q6UXQ8 127 aa15.08■□□□□ 0
USF3-203ENST00000491165 C6orf223Q8N319 242 aa15.08■□□□□ 0
USF3-203ENST00000491165 ENHOQ6UWT2 76 aa15.07■□□□□ 0
USF3-203ENST00000491165 LINC00526Q96FQ7 95 aa15.06■□□□□ 0
USF3-203ENST00000491165 DNAH6Q9C0G6 4158 aa15.06■□□□□ 0
USF3-203ENST00000491165 PRR34Q9NV39 138 aa15.05■□□□□ 0
USF3-203ENST00000491165 COX7CP15954 63 aa15.04■□□□□ -0
USF3-203ENST00000491165 RPL18AQ02543 176 aaKnown RBP15.04■□□□□ -0
USF3-203ENST00000491165 LINC00575Q6W349 94 aa15.04■□□□□ -0
USF3-203ENST00000491165 C2orf48Q96LS8 159 aa15.01□□□□□ -0.01
USF3-203ENST00000491165 M0R2N4 97 aa15.01□□□□□ -0.01
USF3-203ENST00000491165 NBDYA0A0U1RRE5 68 aa15□□□□□ -0.01
USF3-203ENST00000491165 SMIM20Q8N5G0 67 aa14.99□□□□□ -0.01
USF3-203ENST00000491165 hADV29S1A0JD25 119 aa14.99□□□□□ -0.01
USF3-203ENST00000491165 IGLV6-57P01721 117 aa14.99□□□□□ -0.01
USF3-203ENST00000491165 A0A087WVE0 104 aa14.98□□□□□ -0.01
USF3-203ENST00000491165 GVQW2A0A096LPI5 108 aaPredicted RBP14.98□□□□□ -0.01
USF3-203ENST00000491165 ATP5EP2Q5VTU8 51 aa14.96□□□□□ -0.01
USF3-203ENST00000491165 FRAS1Q86XX4 4008 aa14.96□□□□□ -0.01
USF3-203ENST00000491165 ZNF561-AS1K7EIQ3 104 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms