RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 FABP9Q0Z7S8 132 aa7.87□□□□□ -1.15
VARS-227ENST00000489979 HIGD2AQ9BW72 106 aa7.87□□□□□ -1.15
VARS-227ENST00000489979 ERASQ7Z444 233 aa7.86□□□□□ -1.15
VARS-227ENST00000489979 SCGB3A1Q96QR1 104 aa7.86□□□□□ -1.15
VARS-227ENST00000489979 MRPL18Q9H0U6 180 aaKnown RBP7.86□□□□□ -1.15
VARS-227ENST00000489979 TRAPPC1Q9Y5R8 145 aa7.86□□□□□ -1.15
VARS-227ENST00000489979 ATP5LO75964 103 aa7.85□□□□□ -1.15
VARS-227ENST00000489979 KIAA1644Q3SXP7 199 aa7.85□□□□□ -1.15
VARS-227ENST00000489979 SPRR4Q96PI1 79 aa7.85□□□□□ -1.15
VARS-227ENST00000489979 SMCO4Q9NRQ5 59 aa7.85□□□□□ -1.15
VARS-227ENST00000489979 DAND5Q8N907 189 aa7.84□□□□□ -1.15
VARS-227ENST00000489979 Q8NBF4 154 aa7.84□□□□□ -1.15
VARS-227ENST00000489979 SND1-IT1Q9HBX3 110 aa7.84□□□□□ -1.15
VARS-227ENST00000489979 RPL24P83731 157 aaKnown RBP7.83□□□□□ -1.16
VARS-227ENST00000489979 CST9LQ9H4G1 147 aa7.83□□□□□ -1.16
VARS-227ENST00000489979 LINC01549A6NIU2 74 aa7.82□□□□□ -1.16
VARS-227ENST00000489979 FA2HQ7L5A8 372 aa7.82□□□□□ -1.16
VARS-227ENST00000489979 Q8NDZ9 215 aa7.82□□□□□ -1.16
VARS-227ENST00000489979 ERG28Q9UKR5 140 aa7.81□□□□□ -1.16
VARS-227ENST00000489979 H3BRM9 83 aa7.8□□□□□ -1.16
VARS-227ENST00000489979 LCE2CQ5TA81 110 aa7.8□□□□□ -1.16
VARS-227ENST00000489979 ZNF706Q9Y5V0 76 aaPredicted RBP7.8□□□□□ -1.16
VARS-227ENST00000489979 SPINK1P00995 79 aa7.79□□□□□ -1.16
VARS-227ENST00000489979 PMVKQ15126 192 aa7.79□□□□□ -1.16
VARS-227ENST00000489979 IGLV5-39A0A0G2JS06 123 aa7.77□□□□□ -1.17
VARS-227ENST00000489979 COX17Q14061 63 aa7.77□□□□□ -1.17
VARS-227ENST00000489979 ZNF625Q96I27 306 aaPredicted RBP7.77□□□□□ -1.17
VARS-227ENST00000489979 NDUFA12Q9UI09 145 aa7.77□□□□□ -1.17
VARS-227ENST00000489979 LINC00614P0C842 121 aa7.75□□□□□ -1.17
VARS-227ENST00000489979 XP32Q5T750 250 aa7.75□□□□□ -1.17
VARS-227ENST00000489979 LINC01546A6NGU7 62 aa7.74□□□□□ -1.17
VARS-227ENST00000489979 IGLC3P0DOY3 106 aa7.74□□□□□ -1.17
VARS-227ENST00000489979 S100A1P23297 94 aa7.74□□□□□ -1.17
VARS-227ENST00000489979 KRTAP19-2Q3LHN2 52 aa7.74□□□□□ -1.17
VARS-227ENST00000489979 Q8N377 158 aa7.74□□□□□ -1.17
VARS-227ENST00000489979 C18orf32Q8TCD1 76 aa7.74□□□□□ -1.17
VARS-227ENST00000489979 SMCR5Q8TEV8 140 aa7.74□□□□□ -1.17
VARS-227ENST00000489979 YPEL4Q96NS1 127 aa7.74□□□□□ -1.17
VARS-227ENST00000489979 ZNF22P17026 224 aaPredicted RBP7.73□□□□□ -1.17
VARS-227ENST00000489979 MT1HP80294 61 aa7.73□□□□□ -1.17
VARS-227ENST00000489979 FAM19A2Q8N3H0 131 aa7.73□□□□□ -1.17
VARS-227ENST00000489979 PRYO14603 147 aa7.71□□□□□ -1.18
VARS-227ENST00000489979 HBDP02042 147 aa7.71□□□□□ -1.18
VARS-227ENST00000489979 NDUFA6P56556 154 aa7.71□□□□□ -1.18
VARS-227ENST00000489979 RPS29P62273 56 aaKnown RBP7.71□□□□□ -1.18
VARS-227ENST00000489979 LINC00483Q53H64 154 aa7.71□□□□□ -1.18
VARS-227ENST00000489979 BAGE3Q86Y29 109 aa7.71□□□□□ -1.18
VARS-227ENST00000489979 CHCHD1Q96BP2 118 aaKnown RBP7.71□□□□□ -1.18
VARS-227ENST00000489979 IGLV9-49A0A0B4J1Y8 123 aa7.7□□□□□ -1.18
VARS-227ENST00000489979 TRGC2P03986 189 aa7.7□□□□□ -1.18
VARS-227ENST00000489979 CFC1BP0CG36 223 aa7.7□□□□□ -1.18
VARS-227ENST00000489979 LINC00158P58513 81 aa7.7□□□□□ -1.18
VARS-227ENST00000489979 MOBPQ13875 183 aa7.7□□□□□ -1.18
VARS-227ENST00000489979 GAGE2AQ6NT46 116 aa7.7□□□□□ -1.18
VARS-227ENST00000489979 A0A0U1RRA0 63 aa7.69□□□□□ -1.18
VARS-227ENST00000489979 SLC25A20O43772 301 aa7.69□□□□□ -1.18
VARS-227ENST00000489979 SPRR1AP35321 89 aa7.69□□□□□ -1.18
VARS-227ENST00000489979 ETDCA0A1B0GVM5 59 aa7.68□□□□□ -1.18
VARS-227ENST00000489979 HSBP1O75506 76 aa7.68□□□□□ -1.18
VARS-227ENST00000489979 SFTA2Q6UW10 78 aa7.68□□□□□ -1.18
VARS-227ENST00000489979 SSBP3-AS1Q7Z2R9 100 aa7.68□□□□□ -1.18
VARS-227ENST00000489979 COLCA2A8K830 154 aa7.67□□□□□ -1.18
VARS-227ENST00000489979 KRTAP4-16G5E9R7 235 aaPredicted RBP7.67□□□□□ -1.18
VARS-227ENST00000489979 NCR3O14931 201 aa7.67□□□□□ -1.18
VARS-227ENST00000489979 KCNQ1DNQ9H478 68 aa7.67□□□□□ -1.18
VARS-227ENST00000489979 LORP23490 312 aaPredicted RBP7.66□□□□□ -1.18
VARS-227ENST00000489979 C11orf86A6NJI1 115 aa7.65□□□□□ -1.18
VARS-227ENST00000489979 PMCHL1Q16048 86 aa7.65□□□□□ -1.18
VARS-227ENST00000489979 TMEM170BQ5T4T1 132 aa7.65□□□□□ -1.18
VARS-227ENST00000489979 BOD1L2Q8IYS8 172 aa7.65□□□□□ -1.18
VARS-227ENST00000489979 ERC2-IT1O76042 136 aa7.64□□□□□ -1.19
VARS-227ENST00000489979 KRTAP10-6P60371 365 aaPredicted RBP7.64□□□□□ -1.19
VARS-227ENST00000489979 PCOTHQ58A44 107 aa7.64□□□□□ -1.19
VARS-227ENST00000489979 URB1-AS1Q96HZ7 61 aa7.64□□□□□ -1.19
VARS-227ENST00000489979 IGLV8-61A0A075B6I0 122 aa7.63□□□□□ -1.19
VARS-227ENST00000489979 A0A096LNJ9 63 aa7.63□□□□□ -1.19
VARS-227ENST00000489979 TRBV10-3A0A0K0K1G6 114 aa7.63□□□□□ -1.19
VARS-227ENST00000489979 SMIM13P0DJ93 91 aa7.63□□□□□ -1.19
VARS-227ENST00000489979 B5MCH6 92 aa7.62□□□□□ -1.19
VARS-227ENST00000489979 IFI27L1Q96BM0 104 aa7.62□□□□□ -1.19
VARS-227ENST00000489979 SERF1AO75920 110 aa7.61□□□□□ -1.19
VARS-227ENST00000489979 HSPB8Q9UJY1 196 aa7.61□□□□□ -1.19
VARS-227ENST00000489979 LEPROTL1O95214 131 aa7.6□□□□□ -1.19
VARS-227ENST00000489979 MIR7-3HGQ8N6C7 128 aa7.6□□□□□ -1.19
VARS-227ENST00000489979 S100A12P80511 92 aa7.59□□□□□ -1.19
VARS-227ENST00000489979 MEIG1Q5JSS6 88 aa7.59□□□□□ -1.19
VARS-227ENST00000489979 C9orf153Q5TBE3 101 aa7.59□□□□□ -1.19
VARS-227ENST00000489979 Q9BRP9 147 aa7.59□□□□□ -1.19
VARS-227ENST00000489979 CHTOPQ9Y3Y2 248 aaKnown RBP7.59□□□□□ -1.19
VARS-227ENST00000489979 TRAV12-1A0A0B4J245 112 aa7.58□□□□□ -1.2
VARS-227ENST00000489979 FLGP20930 4061 aaPredicted RBP7.57□□□□□ -1.2
VARS-227ENST00000489979 TMEM223A0PJW6 202 aa7.57□□□□□ -1.2
VARS-227ENST00000489979 C9orf92A6NGG3 77 aa7.57□□□□□ -1.2
VARS-227ENST00000489979 H0Y8G0 127 aa7.56□□□□□ -1.2
VARS-227ENST00000489979 M0R2T5 61 aa7.56□□□□□ -1.2
VARS-227ENST00000489979 HIST1H2BKO60814 126 aa7.56□□□□□ -1.2
VARS-227ENST00000489979 HIST1H2BJP06899 126 aa7.56□□□□□ -1.2
VARS-227ENST00000489979 HIST1H2BOP23527 126 aa7.56□□□□□ -1.2
VARS-227ENST00000489979 HIST1H2BBP33778 126 aa7.56□□□□□ -1.2
VARS-227ENST00000489979 HIST1H2BDP58876 126 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms