RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 COX8AP10176 69 aa10.12□□□□□ -0.79
CLIC4-203ENST00000489758 SERTAD4-AS1Q5TG53 156 aa10.12□□□□□ -0.79
CLIC4-203ENST00000489758 TP73-AS1Q9UF72 201 aa10.12□□□□□ -0.79
CLIC4-203ENST00000489758 BOD1L2Q8IYS8 172 aa10.11□□□□□ -0.79
CLIC4-203ENST00000489758 Q8NDZ9 215 aa10.11□□□□□ -0.79
CLIC4-203ENST00000489758 PLA2G2DQ9UNK4 145 aa10.11□□□□□ -0.79
CLIC4-203ENST00000489758 SCGB1D4Q6XE38 83 aa10.1□□□□□ -0.79
CLIC4-203ENST00000489758 FAM19A5Q7Z5A7 132 aaPredicted RBP10.1□□□□□ -0.79
CLIC4-203ENST00000489758 KRTAP4-5Q9BYR2 181 aa10.1□□□□□ -0.79
CLIC4-203ENST00000489758 LOC107984156A0A0G2JMH3 177 aa10.09□□□□□ -0.79
CLIC4-203ENST00000489758 DLEU1O43261 78 aa10.09□□□□□ -0.79
CLIC4-203ENST00000489758 EIF4EBP3O60516 100 aaPredicted RBP10.09□□□□□ -0.79
CLIC4-203ENST00000489758 ARL17AQ8IVW1 177 aa10.09□□□□□ -0.79
CLIC4-203ENST00000489758 IGLV5-37A0A075B6J1 123 aa10.08□□□□□ -0.8
CLIC4-203ENST00000489758 VPREB1P12018 145 aa10.08□□□□□ -0.8
CLIC4-203ENST00000489758 SOSTDC1Q6X4U4 206 aa10.08□□□□□ -0.8
CLIC4-203ENST00000489758 C14orf144Q96I85 54 aa10.08□□□□□ -0.8
CLIC4-203ENST00000489758 RYR1P21817 5038 aa10.07□□□□□ -0.8
CLIC4-203ENST00000489758 SMIM6P0DI80 62 aa10.07□□□□□ -0.8
CLIC4-203ENST00000489758 SPANXDQ9BXN6 97 aa10.07□□□□□ -0.8
CLIC4-203ENST00000489758 SPANXCQ9NY87 97 aa10.07□□□□□ -0.8
CLIC4-203ENST00000489758 TMEM238C9JI98 176 aa10.06□□□□□ -0.8
CLIC4-203ENST00000489758 M0QXV9 152 aa10.06□□□□□ -0.8
CLIC4-203ENST00000489758 SMR3BP02814 79 aaPredicted RBP10.06□□□□□ -0.8
CLIC4-203ENST00000489758 PHF5AQ7RTV0 110 aaKnown RBP10.06□□□□□ -0.8
CLIC4-203ENST00000489758 C22orf24Q9Y442 160 aa10.06□□□□□ -0.8
CLIC4-203ENST00000489758 HSPG2P98160 4391 aa10.06□□□□□ -0.8
CLIC4-203ENST00000489758 LINC00308Q8TCZ7 52 aa10.05□□□□□ -0.8
CLIC4-203ENST00000489758 NPC2P61916 151 aa10.04□□□□□ -0.8
CLIC4-203ENST00000489758 RPL24P83731 157 aaKnown RBP10.04□□□□□ -0.8
CLIC4-203ENST00000489758 SLC25A34Q6PIV7 304 aa10.04□□□□□ -0.8
CLIC4-203ENST00000489758 S100A12P80511 92 aa10.03□□□□□ -0.8
CLIC4-203ENST00000489758 LINC00528Q8N1L1 170 aa10.03□□□□□ -0.8
CLIC4-203ENST00000489758 SPANXB1Q9NS25 103 aaPredicted RBP10.03□□□□□ -0.8
CLIC4-203ENST00000489758 PRR3P79522 188 aaKnown RBP10.02□□□□□ -0.81
CLIC4-203ENST00000489758 Q6ZVH6 145 aa10.02□□□□□ -0.81
CLIC4-203ENST00000489758 MRPL55Q7Z7F7 128 aaKnown RBP10.02□□□□□ -0.81
CLIC4-203ENST00000489758 KRTAP11-1Q8IUC1 163 aa10.02□□□□□ -0.81
CLIC4-203ENST00000489758 MIEN1Q9BRT3 115 aa10.02□□□□□ -0.81
CLIC4-203ENST00000489758 C2orf91Q6ZV80 131 aa10.01□□□□□ -0.81
CLIC4-203ENST00000489758 Q8N1X5 172 aa10.01□□□□□ -0.81
CLIC4-203ENST00000489758 NKAPP1Q8N9T2 125 aa10.01□□□□□ -0.81
CLIC4-203ENST00000489758 C7orf33Q8WU49 177 aa10.01□□□□□ -0.81
CLIC4-203ENST00000489758 PPDPFQ9H3Y8 114 aa10.01□□□□□ -0.81
CLIC4-203ENST00000489758 NDUFC2O95298 119 aa10□□□□□ -0.81
CLIC4-203ENST00000489758 IFITM1P13164 125 aa10□□□□□ -0.81
CLIC4-203ENST00000489758 LBHQ53QV2 105 aaPredicted RBP10□□□□□ -0.81
CLIC4-203ENST00000489758 LINC00167Q96N53 147 aa10□□□□□ -0.81
CLIC4-203ENST00000489758 HIGD1BQ9P298 99 aa10□□□□□ -0.81
CLIC4-203ENST00000489758 ABCA13Q86UQ4 5058 aa9.99□□□□□ -0.81
CLIC4-203ENST00000489758 GAGE10A6NGK3 116 aa9.99□□□□□ -0.81
CLIC4-203ENST00000489758 MUSTN1Q8IVN3 82 aa9.99□□□□□ -0.81
CLIC4-203ENST00000489758 NCR3O14931 201 aa9.98□□□□□ -0.81
CLIC4-203ENST00000489758 KRTAP10-4P60372 401 aaPredicted RBP9.98□□□□□ -0.81
CLIC4-203ENST00000489758 M0R378 163 aa9.97□□□□□ -0.81
CLIC4-203ENST00000489758 SRSF9Q13242 221 aaKnown RBP eCLIP9.97□□□□□ -0.81
CLIC4-203ENST00000489758 IGKV2-28A0A075B6P5 120 aa9.96□□□□□ -0.82
CLIC4-203ENST00000489758 TRBV10-2A0A0K0K1G8 114 aa9.96□□□□□ -0.82
CLIC4-203ENST00000489758 RPL37AP8A6NKH3 93 aa9.96□□□□□ -0.82
CLIC4-203ENST00000489758 FAM229AH3BQW9 127 aa9.96□□□□□ -0.82
CLIC4-203ENST00000489758 IGKV2D-28P01615 120 aa9.96□□□□□ -0.82
CLIC4-203ENST00000489758 UBE2BP63146 152 aa9.96□□□□□ -0.82
CLIC4-203ENST00000489758 Q5VSD8 79 aa9.96□□□□□ -0.82
CLIC4-203ENST00000489758 COPS9Q8WXC6 57 aa9.96□□□□□ -0.82
CLIC4-203ENST00000489758 C12orf57Q99622 126 aa9.96□□□□□ -0.82
CLIC4-203ENST00000489758 IGLV1-50A0A075B6I6 118 aa9.95□□□□□ -0.82
CLIC4-203ENST00000489758 RPL37AP61513 92 aaKnown RBP9.95□□□□□ -0.82
CLIC4-203ENST00000489758 UQCR10Q9UDW1 63 aa9.95□□□□□ -0.82
CLIC4-203ENST00000489758 PSORS1C2Q9UIG4 136 aa9.95□□□□□ -0.82
CLIC4-203ENST00000489758 HIST1H4GQ99525 98 aa9.94□□□□□ -0.82
CLIC4-203ENST00000489758 FAT1Q14517 4588 aa9.94□□□□□ -0.82
CLIC4-203ENST00000489758 PRO1933Q9H354 126 aa9.93□□□□□ -0.82
CLIC4-203ENST00000489758 LINC00518Q8N0U6 118 aa9.92□□□□□ -0.82
CLIC4-203ENST00000489758 TRBV10-3A0A0K0K1G6 114 aa9.91□□□□□ -0.82
CLIC4-203ENST00000489758 IGLV6-57P01721 117 aa9.91□□□□□ -0.82
CLIC4-203ENST00000489758 PLA2G1BP04054 148 aaKnown RBP9.91□□□□□ -0.82
CLIC4-203ENST00000489758 A4D1N5 150 aa9.9□□□□□ -0.82
CLIC4-203ENST00000489758 TAL2Q16559 108 aa9.9□□□□□ -0.82
CLIC4-203ENST00000489758 LINC00337Q8N6G1 96 aa9.9□□□□□ -0.82
CLIC4-203ENST00000489758 DDTP30046 118 aa9.89□□□□□ -0.83
CLIC4-203ENST00000489758 C1orf137Q5JT78 98 aa9.89□□□□□ -0.83
CLIC4-203ENST00000489758 KCNQ1DNQ9H478 68 aa9.89□□□□□ -0.83
CLIC4-203ENST00000489758 TMEM126AQ9H061 195 aa9.88□□□□□ -0.83
CLIC4-203ENST00000489758 HNRNPA3P51991 378 aaKnown RBP9.87□□□□□ -0.83
CLIC4-203ENST00000489758 S100A7L2Q5SY68 101 aa9.87□□□□□ -0.83
CLIC4-203ENST00000489758 CEND1Q8N111 149 aa9.87□□□□□ -0.83
CLIC4-203ENST00000489758 PRYO14603 147 aa9.86□□□□□ -0.83
CLIC4-203ENST00000489758 BCE1O60756 84 aa9.86□□□□□ -0.83
CLIC4-203ENST00000489758 HSD52Q0P140 79 aa9.86□□□□□ -0.83
CLIC4-203ENST00000489758 REG3GQ6UW15 175 aa9.86□□□□□ -0.83
CLIC4-203ENST00000489758 IGLV7-43P04211 117 aa9.85□□□□□ -0.83
CLIC4-203ENST00000489758 SPRR1AP35321 89 aa9.85□□□□□ -0.83
CLIC4-203ENST00000489758 VPS13BQ7Z7G8 4022 aa9.85□□□□□ -0.83
CLIC4-203ENST00000489758 KRTAP4-16G5E9R7 235 aaPredicted RBP9.84□□□□□ -0.83
CLIC4-203ENST00000489758 OR13C6PQ8NH95 151 aa9.84□□□□□ -0.83
CLIC4-203ENST00000489758 TRAV23DV6A0A075B6W5 121 aa9.83□□□□□ -0.84
CLIC4-203ENST00000489758 TSTD3H0UI37 97 aa9.83□□□□□ -0.84
CLIC4-203ENST00000489758 FXYD2P54710 66 aa9.83□□□□□ -0.84
CLIC4-203ENST00000489758 KRTAP13-1Q8IUC0 172 aa9.83□□□□□ -0.84
CLIC4-203ENST00000489758 SRRM2Q9UQ35 2752 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms