RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 GAGE2EQ4V326 116 aa7.11□□□□□ -1.27
HDLBP-242ENST00000488013 Q6ZRP5 223 aa7.11□□□□□ -1.27
HDLBP-242ENST00000488013 HIST1H4GQ99525 98 aa7.11□□□□□ -1.27
HDLBP-242ENST00000488013 PRO1933Q9H354 126 aa7.11□□□□□ -1.27
HDLBP-242ENST00000488013 SND1-IT1Q9HBX3 110 aa7.11□□□□□ -1.27
HDLBP-242ENST00000488013 GAGE2DQ9UEU5 116 aa7.11□□□□□ -1.27
HDLBP-242ENST00000488013 A0A0U1RRA0 63 aa7.1□□□□□ -1.27
HDLBP-242ENST00000488013 A0A1B0GVY2 172 aa7.1□□□□□ -1.27
HDLBP-242ENST00000488013 KRTAP10-2P60368 255 aa7.1□□□□□ -1.27
HDLBP-242ENST00000488013 HSD52Q0P140 79 aa7.1□□□□□ -1.27
HDLBP-242ENST00000488013 GAGE2BQ13066 116 aa7.1□□□□□ -1.27
HDLBP-242ENST00000488013 ADAMTSL4-AS1Q5T5F5 129 aa7.1□□□□□ -1.27
HDLBP-242ENST00000488013 FAT2Q9NYQ8 4349 aa7.1□□□□□ -1.27
HDLBP-242ENST00000488013 C2orf91Q6ZV80 131 aa7.09□□□□□ -1.27
HDLBP-242ENST00000488013 LINC00308Q8TCZ7 52 aa7.09□□□□□ -1.27
HDLBP-242ENST00000488013 PLA2G2DQ9UNK4 145 aa7.09□□□□□ -1.27
HDLBP-242ENST00000488013 NDUFC2O95298 119 aa7.08□□□□□ -1.28
HDLBP-242ENST00000488013 DPH3Q96FX2 82 aa7.08□□□□□ -1.28
HDLBP-242ENST00000488013 M0R143 59 aa7.07□□□□□ -1.28
HDLBP-242ENST00000488013 DDTP30046 118 aa7.07□□□□□ -1.28
HDLBP-242ENST00000488013 DAND5Q8N907 189 aa7.07□□□□□ -1.28
HDLBP-242ENST00000488013 XAGE1AQ9HD64 81 aa7.07□□□□□ -1.28
HDLBP-242ENST00000488013 CBY1Q9Y3M2 126 aa7.07□□□□□ -1.28
HDLBP-242ENST00000488013 A0A096LNI7 61 aa7.06□□□□□ -1.28
HDLBP-242ENST00000488013 IGKV2-24A0A0C4DH68 120 aa7.06□□□□□ -1.28
HDLBP-242ENST00000488013 MUSTN1Q8IVN3 82 aa7.06□□□□□ -1.28
HDLBP-242ENST00000488013 CEND1Q8N111 149 aa7.06□□□□□ -1.28
HDLBP-242ENST00000488013 DNAH11Q96DT5 4516 aa7.06□□□□□ -1.28
HDLBP-242ENST00000488013 FRAS1Q86XX4 4008 aa7.05□□□□□ -1.28
HDLBP-242ENST00000488013 TRBV10-2A0A0K0K1G8 114 aa7.05□□□□□ -1.28
HDLBP-242ENST00000488013 LBHQ53QV2 105 aaPredicted RBP7.05□□□□□ -1.28
HDLBP-242ENST00000488013 C9orf129Q5T035 196 aaKnown RBP7.05□□□□□ -1.28
HDLBP-242ENST00000488013 SPACA4Q8TDM5 124 aa7.05□□□□□ -1.28
HDLBP-242ENST00000488013 PCLOQ9Y6V0 5065 aa7.04□□□□□ -1.28
HDLBP-242ENST00000488013 IGLV5-37A0A075B6J1 123 aa7.04□□□□□ -1.28
HDLBP-242ENST00000488013 LINC01620Q4KN68 170 aa7.04□□□□□ -1.28
HDLBP-242ENST00000488013 NKAPP1Q8N9T2 125 aa7.04□□□□□ -1.28
HDLBP-242ENST00000488013 TRAV13-2A0A0B4J235 113 aa7.03□□□□□ -1.28
HDLBP-242ENST00000488013 CTAG1AP78358 180 aa7.03□□□□□ -1.28
HDLBP-242ENST00000488013 Q6ZSA8 131 aa7.03□□□□□ -1.28
HDLBP-242ENST00000488013 EPM2AB3EWF7 344 aa7.02□□□□□ -1.29
HDLBP-242ENST00000488013 M0R378 163 aa7.02□□□□□ -1.29
HDLBP-242ENST00000488013 VPREB1P12018 145 aa7.02□□□□□ -1.29
HDLBP-242ENST00000488013 KRTAP10-1P60331 282 aa7.02□□□□□ -1.29
HDLBP-242ENST00000488013 NPC2P61916 151 aa7.02□□□□□ -1.29
HDLBP-242ENST00000488013 SOSTDC1Q6X4U4 206 aa7.02□□□□□ -1.29
HDLBP-242ENST00000488013 PLAC8Q9NZF1 115 aa7.02□□□□□ -1.29
HDLBP-242ENST00000488013 A4D1N5 150 aa7.01□□□□□ -1.29
HDLBP-242ENST00000488013 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
HDLBP-242ENST00000488013 FUSP35637 526 aaKnown RBP eCLIP7.01□□□□□ -1.29
HDLBP-242ENST00000488013 TMEM126AQ9H061 195 aa7.01□□□□□ -1.29
HDLBP-242ENST00000488013 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.01□□□□□ -1.29
HDLBP-242ENST00000488013 A0A087WYN8 130 aa7□□□□□ -1.29
HDLBP-242ENST00000488013 A0A0B4J2C4 111 aa7□□□□□ -1.29
HDLBP-242ENST00000488013 A6NDN8 102 aa7□□□□□ -1.29
HDLBP-242ENST00000488013 S100A7L2Q5SY68 101 aa7□□□□□ -1.29
HDLBP-242ENST00000488013 MRPL55Q7Z7F7 128 aaKnown RBP7□□□□□ -1.29
HDLBP-242ENST00000488013 C22orf24Q9Y442 160 aa7□□□□□ -1.29
HDLBP-242ENST00000488013 DNAH5Q8TE73 4624 aa6.99□□□□□ -1.29
HDLBP-242ENST00000488013 A0A1W2PNN7 141 aa6.99□□□□□ -1.29
HDLBP-242ENST00000488013 M0QXV9 152 aa6.99□□□□□ -1.29
HDLBP-242ENST00000488013 BVES-AS1Q5T3Y7 98 aa6.99□□□□□ -1.29
HDLBP-242ENST00000488013 FAM19A5Q7Z5A7 132 aaPredicted RBP6.99□□□□□ -1.29
HDLBP-242ENST00000488013 RAB37Q96AX2 223 aa6.99□□□□□ -1.29
HDLBP-242ENST00000488013 SERTAD4-AS1Q5TG53 156 aa6.98□□□□□ -1.29
HDLBP-242ENST00000488013 PKD1P98161 4303 aa6.97□□□□□ -1.29
HDLBP-242ENST00000488013 FAM168BA1KXE4 195 aa6.97□□□□□ -1.29
HDLBP-242ENST00000488013 HINT1P49773 126 aaPredicted RBP6.97□□□□□ -1.29
HDLBP-242ENST00000488013 FXYD2P54710 66 aa6.97□□□□□ -1.29
HDLBP-242ENST00000488013 OR13C6PQ8NH95 151 aa6.97□□□□□ -1.29
HDLBP-242ENST00000488013 C7orf33Q8WU49 177 aa6.97□□□□□ -1.29
HDLBP-242ENST00000488013 IGKV2-28A0A075B6P5 120 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 A0A1B0GWB2 263 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 PCP4L1A6NKN8 68 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 H3BS24 57 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 PANO1I0J062 215 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 NCR3O14931 201 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 IGKV2D-28P01615 120 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 IGLV6-57P01721 117 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 CFC1BP0CG36 223 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 CFC1P0CG37 223 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 CIRBP-AS1Q8TBR5 109 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 FAM30AQ9NZY2 134 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 PRO1854Q9UHT4 67 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 HECTD4Q9Y4D8 3996 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 LRP1BQ9NZR2 4599 aa6.96□□□□□ -1.3
HDLBP-242ENST00000488013 DYNC1H1Q14204 4646 aaKnown RBP6.96□□□□□ -1.3
HDLBP-242ENST00000488013 CDK2AP2O75956 126 aa6.95□□□□□ -1.3
HDLBP-242ENST00000488013 UBE2BP63146 152 aa6.95□□□□□ -1.3
HDLBP-242ENST00000488013 PRR3P79522 188 aaKnown RBP6.95□□□□□ -1.3
HDLBP-242ENST00000488013 SCXQ7RTU7 201 aa6.95□□□□□ -1.3
HDLBP-242ENST00000488013 LINC00167Q96N53 147 aa6.95□□□□□ -1.3
HDLBP-242ENST00000488013 NHP2Q9NX24 153 aaKnown RBP6.95□□□□□ -1.3
HDLBP-242ENST00000488013 IGLV1-50A0A075B6I6 118 aa6.94□□□□□ -1.3
HDLBP-242ENST00000488013 KRTAP7-1Q8IUC3 87 aa6.94□□□□□ -1.3
HDLBP-242ENST00000488013 LINC00337Q8N6G1 96 aa6.94□□□□□ -1.3
HDLBP-242ENST00000488013 Q8NDZ9 215 aa6.94□□□□□ -1.3
HDLBP-242ENST00000488013 KCNQ1DNQ9H478 68 aa6.94□□□□□ -1.3
HDLBP-242ENST00000488013 TRBV10-3A0A0K0K1G6 114 aa6.93□□□□□ -1.3
HDLBP-242ENST00000488013 PRYO14603 147 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms