RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 MED9Q9NWA0 146 aa4.24□□□□□ -1.73
XRN1-212ENST00000486211 GATCO43716 136 aaKnown RBP4.23□□□□□ -1.73
XRN1-212ENST00000486211 PDE6DO43924 150 aa4.23□□□□□ -1.73
XRN1-212ENST00000486211 RAB5BP61020 215 aa4.23□□□□□ -1.73
XRN1-212ENST00000486211 MRPL51Q4U2R6 128 aaKnown RBP4.23□□□□□ -1.73
XRN1-212ENST00000486211 TEX43Q6ZNM6 134 aa4.23□□□□□ -1.73
XRN1-212ENST00000486211 FAM19A3Q7Z5A8 133 aa4.23□□□□□ -1.73
XRN1-212ENST00000486211 SMCR5Q8TEV8 140 aa4.23□□□□□ -1.73
XRN1-212ENST00000486211 BORCS7Q96B45 105 aa4.23□□□□□ -1.73
XRN1-212ENST00000486211 CDKN2A-AS1Q9UH64 79 aa4.23□□□□□ -1.73
XRN1-212ENST00000486211 HIGD1CA8MV81 97 aa4.22□□□□□ -1.73
XRN1-212ENST00000486211 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
XRN1-212ENST00000486211 GAGE2AQ6NT46 116 aa4.22□□□□□ -1.73
XRN1-212ENST00000486211 FAM231DQ6ZW35 169 aa4.22□□□□□ -1.73
XRN1-212ENST00000486211 AMELXQ99217 191 aa4.22□□□□□ -1.73
XRN1-212ENST00000486211 IGLV5-39A0A0G2JS06 123 aa4.21□□□□□ -1.74
XRN1-212ENST00000486211 GIPP09681 153 aaPredicted RBP4.21□□□□□ -1.74
XRN1-212ENST00000486211 C2orf88Q9BSF0 95 aa4.21□□□□□ -1.74
XRN1-212ENST00000486211 SMIM1B2RUZ4 78 aa4.2□□□□□ -1.74
XRN1-212ENST00000486211 FAM104BQ5XKR9 115 aa4.2□□□□□ -1.74
XRN1-212ENST00000486211 C2orf66Q6UXQ4 117 aa4.2□□□□□ -1.74
XRN1-212ENST00000486211 AKAP14Q86UN6 197 aa4.2□□□□□ -1.74
XRN1-212ENST00000486211 LINC00862A6NCI5 91 aa4.19□□□□□ -1.74
XRN1-212ENST00000486211 COX7B2Q8TF08 81 aa4.19□□□□□ -1.74
XRN1-212ENST00000486211 SND1-IT1Q9HBX3 110 aa4.19□□□□□ -1.74
XRN1-212ENST00000486211 ARPC5O15511 151 aa4.18□□□□□ -1.74
XRN1-212ENST00000486211 ERC2-IT1O76042 136 aa4.18□□□□□ -1.74
XRN1-212ENST00000486211 NPYP01303 97 aa4.18□□□□□ -1.74
XRN1-212ENST00000486211 SPRR1AP35321 89 aa4.18□□□□□ -1.74
XRN1-212ENST00000486211 HERVK_113P63121 156 aa4.18□□□□□ -1.74
XRN1-212ENST00000486211 RPL24P83731 157 aaKnown RBP4.18□□□□□ -1.74
XRN1-212ENST00000486211 TIMM17AQ99595 171 aa4.18□□□□□ -1.74
XRN1-212ENST00000486211 CKS2P33552 79 aa4.17□□□□□ -1.74
XRN1-212ENST00000486211 RAB14P61106 215 aa4.17□□□□□ -1.74
XRN1-212ENST00000486211 RIGQ13278 110 aa4.17□□□□□ -1.74
XRN1-212ENST00000486211 PDZD11Q5EBL8 140 aa4.17□□□□□ -1.74
XRN1-212ENST00000486211 LINC00299Q6ZSB3 139 aa4.17□□□□□ -1.74
XRN1-212ENST00000486211 S100ZQ8WXG8 99 aa4.17□□□□□ -1.74
XRN1-212ENST00000486211 VCX2Q9H322 139 aa4.17□□□□□ -1.74
XRN1-212ENST00000486211 C5orf52A6NGY3 159 aa4.16□□□□□ -1.74
XRN1-212ENST00000486211 D6R8Y8 96 aa4.16□□□□□ -1.74
XRN1-212ENST00000486211 PFN2P35080 140 aa4.16□□□□□ -1.74
XRN1-212ENST00000486211 LIMD2Q9BT23 127 aa4.16□□□□□ -1.74
XRN1-212ENST00000486211 CHTOPQ9Y3Y2 248 aaKnown RBP4.16□□□□□ -1.74
XRN1-212ENST00000486211 IGIPA6NJ69 53 aa4.15□□□□□ -1.75
XRN1-212ENST00000486211 SEC11AP67812 179 aa4.15□□□□□ -1.75
XRN1-212ENST00000486211 C9orf153Q5TBE3 101 aa4.15□□□□□ -1.75
XRN1-212ENST00000486211 C20orf202A1L168 122 aa4.14□□□□□ -1.75
XRN1-212ENST00000486211 KRTAP2-3P0C7H8 128 aa4.14□□□□□ -1.75
XRN1-212ENST00000486211 RAB5AP20339 215 aa4.14□□□□□ -1.75
XRN1-212ENST00000486211 KIAA1644Q3SXP7 199 aa4.14□□□□□ -1.75
XRN1-212ENST00000486211 KRTAP2-4Q9BYR9 128 aa4.14□□□□□ -1.75
XRN1-212ENST00000486211 IGLV5-45A0A087WSX0 123 aa4.13□□□□□ -1.75
XRN1-212ENST00000486211 ATP5LO75964 103 aa4.13□□□□□ -1.75
XRN1-212ENST00000486211 ZNF345Q14585 488 aa4.13□□□□□ -1.75
XRN1-212ENST00000486211 KCNQ1DNQ9H478 68 aa4.13□□□□□ -1.75
XRN1-212ENST00000486211 CYSLTR1Q9Y271 337 aa4.13□□□□□ -1.75
XRN1-212ENST00000486211 ETDCA0A1B0GVM5 59 aa4.12□□□□□ -1.75
XRN1-212ENST00000486211 LGALS3P17931 250 aaKnown RBP4.12□□□□□ -1.75
XRN1-212ENST00000486211 HRCT1Q6UXD1 115 aa4.12□□□□□ -1.75
XRN1-212ENST00000486211 Q9BRP9 147 aa4.12□□□□□ -1.75
XRN1-212ENST00000486211 OSTCQ9NRP0 149 aa4.12□□□□□ -1.75
XRN1-212ENST00000486211 ERG28Q9UKR5 140 aa4.12□□□□□ -1.75
XRN1-212ENST00000486211 V9GYV3 84 aa4.12□□□□□ -1.75
XRN1-212ENST00000486211 LOC389332A0A1B0GUA5 103 aa4.11□□□□□ -1.75
XRN1-212ENST00000486211 TEX46H3BTG2 121 aa4.11□□□□□ -1.75
XRN1-212ENST00000486211 SPINK8P0C7L1 97 aa4.11□□□□□ -1.75
XRN1-212ENST00000486211 SMLR1H3BR10 107 aa4.1□□□□□ -1.75
XRN1-212ENST00000486211 PPBPP02775 128 aa4.1□□□□□ -1.75
XRN1-212ENST00000486211 TAGLN2P37802 199 aaKnown RBP4.1□□□□□ -1.75
XRN1-212ENST00000486211 COX17Q14061 63 aa4.1□□□□□ -1.75
XRN1-212ENST00000486211 C1orf195Q5TG92 126 aa4.1□□□□□ -1.75
XRN1-212ENST00000486211 NAT8BQ9UHF3 227 aa4.1□□□□□ -1.75
XRN1-212ENST00000486211 TINCRA0A1B0GVN0 87 aa4.09□□□□□ -1.75
XRN1-212ENST00000486211 TMEM250H0YL14 139 aa4.09□□□□□ -1.75
XRN1-212ENST00000486211 KRTAP5-9P26371 169 aa4.09□□□□□ -1.75
XRN1-212ENST00000486211 UBE2V1Q13404 147 aa4.09□□□□□ -1.75
XRN1-212ENST00000486211 FAM74A3Q4VXF1 159 aa4.09□□□□□ -1.75
XRN1-212ENST00000486211 KMT2DO14686 5537 aa4.09□□□□□ -1.75
XRN1-212ENST00000486211 TRAV9-1A0A075B6T8 112 aa4.08□□□□□ -1.76
XRN1-212ENST00000486211 A0A1B0GW15 77 aa4.08□□□□□ -1.76
XRN1-212ENST00000486211 SNRPEP62304 92 aaKnown RBP4.08□□□□□ -1.76
XRN1-212ENST00000486211 ORMDL3Q8N138 153 aa4.08□□□□□ -1.76
XRN1-212ENST00000486211 TRBV10-3A0A0K0K1G6 114 aa4.07□□□□□ -1.76
XRN1-212ENST00000486211 A0A1B0GXF2 115 aa4.07□□□□□ -1.76
XRN1-212ENST00000486211 KANTRA0A1W2PQU2 76 aa4.07□□□□□ -1.76
XRN1-212ENST00000486211 PAPPA-AS1Q5QFB9 102 aa4.07□□□□□ -1.76
XRN1-212ENST00000486211 Q5XG85 94 aa4.07□□□□□ -1.76
XRN1-212ENST00000486211 TMEM136Q6ZRR5 245 aa4.07□□□□□ -1.76
XRN1-212ENST00000486211 PRELID3AQ96N28 172 aa4.07□□□□□ -1.76
XRN1-212ENST00000486211 C20orf166-AS1Q96NR2 134 aa4.07□□□□□ -1.76
XRN1-212ENST00000486211 SMIM27A0A1W2PRY6 76 aa4.06□□□□□ -1.76
XRN1-212ENST00000486211 HMSDA8MTL9 139 aa4.06□□□□□ -1.76
XRN1-212ENST00000486211 ATP11AUNQ6ZP68 121 aa4.06□□□□□ -1.76
XRN1-212ENST00000486211 Q6ZRX8 168 aa4.06□□□□□ -1.76
XRN1-212ENST00000486211 Q8N8P6 123 aa4.06□□□□□ -1.76
XRN1-212ENST00000486211 ZNF625Q96I27 306 aaPredicted RBP4.06□□□□□ -1.76
XRN1-212ENST00000486211 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
XRN1-212ENST00000486211 F8W036 122 aa4.05□□□□□ -1.76
XRN1-212ENST00000486211 NCR3O14931 201 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms