RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 TRAV12-1A0A0B4J245 112 aa7.94□□□□□ -1.14
HMG20B-211ENST00000486028 PLA2G1BP04054 148 aaKnown RBP7.94□□□□□ -1.14
HMG20B-211ENST00000486028 CHTF8P0CG12 524 aa7.94□□□□□ -1.14
HMG20B-211ENST00000486028 HERVK_113P63121 156 aa7.94□□□□□ -1.14
HMG20B-211ENST00000486028 Q6ZRU5 148 aa7.94□□□□□ -1.14
HMG20B-211ENST00000486028 FAM19A3Q7Z5A8 133 aa7.94□□□□□ -1.14
HMG20B-211ENST00000486028 SPACA4Q8TDM5 124 aa7.94□□□□□ -1.14
HMG20B-211ENST00000486028 GEMIN7Q9H840 131 aaKnown RBP7.94□□□□□ -1.14
HMG20B-211ENST00000486028 LINC00474Q9P2X8 69 aa7.94□□□□□ -1.14
HMG20B-211ENST00000486028 VPS13BQ7Z7G8 4022 aa7.93□□□□□ -1.14
HMG20B-211ENST00000486028 TMEM238C9JI98 176 aa7.93□□□□□ -1.14
HMG20B-211ENST00000486028 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.93□□□□□ -1.14
HMG20B-211ENST00000486028 SCGB1A1P11684 91 aa7.93□□□□□ -1.14
HMG20B-211ENST00000486028 PLNP26678 52 aa7.93□□□□□ -1.14
HMG20B-211ENST00000486028 A0A087WYN8 130 aa7.92□□□□□ -1.14
HMG20B-211ENST00000486028 IGKV2-24A0A0C4DH68 120 aa7.92□□□□□ -1.14
HMG20B-211ENST00000486028 A0A0J9YXV3 536 aa7.92□□□□□ -1.14
HMG20B-211ENST00000486028 LOC107984640A0A0U1RRK4 108 aa7.92□□□□□ -1.14
HMG20B-211ENST00000486028 NDUFA1O15239 70 aa7.92□□□□□ -1.14
HMG20B-211ENST00000486028 INAFM2P0DMQ5 153 aa7.92□□□□□ -1.14
HMG20B-211ENST00000486028 PMVKQ15126 192 aa7.92□□□□□ -1.14
HMG20B-211ENST00000486028 MRPL35Q9NZE8 188 aaKnown RBP7.92□□□□□ -1.14
HMG20B-211ENST00000486028 A0A096LNI7 61 aa7.91□□□□□ -1.14
HMG20B-211ENST00000486028 A0A1B0GWB2 263 aa7.91□□□□□ -1.14
HMG20B-211ENST00000486028 F8W1H4 67 aa7.91□□□□□ -1.14
HMG20B-211ENST00000486028 TINCRA0A1B0GVN0 87 aa7.9□□□□□ -1.14
HMG20B-211ENST00000486028 F8VRH5 84 aa7.9□□□□□ -1.14
HMG20B-211ENST00000486028 PRSS2P07478 247 aa7.9□□□□□ -1.14
HMG20B-211ENST00000486028 KIAA0087Q14695 138 aa7.9□□□□□ -1.14
HMG20B-211ENST00000486028 UNQ6190/PRO20217Q6UXQ8 127 aa7.9□□□□□ -1.14
HMG20B-211ENST00000486028 NHP2Q9NX24 153 aaKnown RBP7.9□□□□□ -1.14
HMG20B-211ENST00000486028 PLAC8Q9NZF1 115 aa7.9□□□□□ -1.14
HMG20B-211ENST00000486028 CDKN2A-AS1Q9UH64 79 aa7.9□□□□□ -1.14
HMG20B-211ENST00000486028 J3QR89 54 aa7.89□□□□□ -1.15
HMG20B-211ENST00000486028 GAGE2BQ13066 116 aa7.89□□□□□ -1.15
HMG20B-211ENST00000486028 TTTY13Q9BZ97 58 aa7.89□□□□□ -1.15
HMG20B-211ENST00000486028 SPANXB1Q9NS25 103 aaPredicted RBP7.89□□□□□ -1.15
HMG20B-211ENST00000486028 MYMXA0A1B0GTQ4 84 aa7.88□□□□□ -1.15
HMG20B-211ENST00000486028 K7ERJ3 54 aa7.88□□□□□ -1.15
HMG20B-211ENST00000486028 CKS1BP61024 79 aa7.88□□□□□ -1.15
HMG20B-211ENST00000486028 RPL24P83731 157 aaKnown RBP7.88□□□□□ -1.15
HMG20B-211ENST00000486028 C6orf226Q5I0X4 101 aa7.88□□□□□ -1.15
HMG20B-211ENST00000486028 C10orf25Q5T742 122 aa7.88□□□□□ -1.15
HMG20B-211ENST00000486028 TOMM7Q9P0U1 55 aa7.88□□□□□ -1.15
HMG20B-211ENST00000486028 CHTOPQ9Y3Y2 248 aaKnown RBP7.88□□□□□ -1.15
HMG20B-211ENST00000486028 IGLV5-45A0A087WSX0 123 aa7.87□□□□□ -1.15
HMG20B-211ENST00000486028 RPL37AP61513 92 aaKnown RBP7.87□□□□□ -1.15
HMG20B-211ENST00000486028 Q8IZM0 81 aa7.87□□□□□ -1.15
HMG20B-211ENST00000486028 TRBV30A0A0K0K1B3 111 aa7.86□□□□□ -1.15
HMG20B-211ENST00000486028 RPL18AQ02543 176 aaKnown RBP7.86□□□□□ -1.15
HMG20B-211ENST00000486028 C2orf82Q6UX34 121 aa7.86□□□□□ -1.15
HMG20B-211ENST00000486028 C7orf33Q8WU49 177 aa7.86□□□□□ -1.15
HMG20B-211ENST00000486028 HIST1H4GQ99525 98 aa7.86□□□□□ -1.15
HMG20B-211ENST00000486028 SIGMAR1Q99720 223 aa7.86□□□□□ -1.15
HMG20B-211ENST00000486028 C6orf48Q9UBA6 75 aa7.86□□□□□ -1.15
HMG20B-211ENST00000486028 TLX1NBP0CAT3 122 aa7.85□□□□□ -1.15
HMG20B-211ENST00000486028 PRO0461Q9UI25 63 aa7.85□□□□□ -1.15
HMG20B-211ENST00000486028 FLG2Q5D862 2391 aaPredicted RBP7.84□□□□□ -1.15
HMG20B-211ENST00000486028 SMIM1B2RUZ4 78 aa7.84□□□□□ -1.15
HMG20B-211ENST00000486028 CXCL5P42830 114 aa7.83□□□□□ -1.16
HMG20B-211ENST00000486028 KRTAP10-4P60372 401 aaPredicted RBP7.83□□□□□ -1.16
HMG20B-211ENST00000486028 COX7B2Q8TF08 81 aa7.83□□□□□ -1.16
HMG20B-211ENST00000486028 NDUFC2-KCTD14E9PQ53 114 aa7.82□□□□□ -1.16
HMG20B-211ENST00000486028 SPINK8P0C7L1 97 aa7.82□□□□□ -1.16
HMG20B-211ENST00000486028 C9orf116Q5BN46 136 aaPredicted RBP7.82□□□□□ -1.16
HMG20B-211ENST00000486028 Q6ZRP5 223 aa7.82□□□□□ -1.16
HMG20B-211ENST00000486028 A0A1W2PNN7 141 aa7.81□□□□□ -1.16
HMG20B-211ENST00000486028 GAGE2EQ4V326 116 aa7.81□□□□□ -1.16
HMG20B-211ENST00000486028 GAGE2DQ9UEU5 116 aa7.81□□□□□ -1.16
HMG20B-211ENST00000486028 H3BMG7 143 aa7.8□□□□□ -1.16
HMG20B-211ENST00000486028 TRIAP1O43715 76 aa7.8□□□□□ -1.16
HMG20B-211ENST00000486028 ZNF22P17026 224 aaPredicted RBP7.8□□□□□ -1.16
HMG20B-211ENST00000486028 HERVK_113P61574 105 aa7.8□□□□□ -1.16
HMG20B-211ENST00000486028 LYRM7Q5U5X0 104 aa7.8□□□□□ -1.16
HMG20B-211ENST00000486028 C11orf86A6NJI1 115 aa7.79□□□□□ -1.16
HMG20B-211ENST00000486028 ZNF815PA8K554 130 aa7.79□□□□□ -1.16
HMG20B-211ENST00000486028 TMEM170BQ5T4T1 132 aa7.79□□□□□ -1.16
HMG20B-211ENST00000486028 IGLV5-39A0A0G2JS06 123 aa7.78□□□□□ -1.16
HMG20B-211ENST00000486028 ETDBQ3ZM63 59 aa7.78□□□□□ -1.16
HMG20B-211ENST00000486028 FAM168BA1KXE4 195 aa7.76□□□□□ -1.17
HMG20B-211ENST00000486028 PRR3P79522 188 aaKnown RBP7.76□□□□□ -1.17
HMG20B-211ENST00000486028 PLEKHB2Q96CS7 222 aa7.76□□□□□ -1.17
HMG20B-211ENST00000486028 DMBT1Q9UGM3 2413 aaPredicted RBP7.76□□□□□ -1.17
HMG20B-211ENST00000486028 TRBV20-1A0A075B6N2 111 aa7.75□□□□□ -1.17
HMG20B-211ENST00000486028 TSPAN13O95857 204 aa7.75□□□□□ -1.17
HMG20B-211ENST00000486028 SRSF9Q13242 221 aaKnown RBP eCLIP7.75□□□□□ -1.17
HMG20B-211ENST00000486028 C9orf129Q5T035 196 aaKnown RBP7.75□□□□□ -1.17
HMG20B-211ENST00000486028 SCGB1D4Q6XE38 83 aa7.75□□□□□ -1.17
HMG20B-211ENST00000486028 PHF5AQ7RTV0 110 aaKnown RBP7.75□□□□□ -1.17
HMG20B-211ENST00000486028 FAM19A5Q7Z5A7 132 aaPredicted RBP7.75□□□□□ -1.17
HMG20B-211ENST00000486028 MYCBP2O75592 4640 aa7.75□□□□□ -1.17
HMG20B-211ENST00000486028 A0A1B0GV72 72 aa7.74□□□□□ -1.17
HMG20B-211ENST00000486028 M0QXV9 152 aa7.74□□□□□ -1.17
HMG20B-211ENST00000486028 SFTA2Q6UW10 78 aa7.74□□□□□ -1.17
HMG20B-211ENST00000486028 PPDPFLQ8WWR9 84 aa7.74□□□□□ -1.17
HMG20B-211ENST00000486028 TMEM223A0PJW6 202 aa7.73□□□□□ -1.17
HMG20B-211ENST00000486028 PSMB2P49721 201 aa7.73□□□□□ -1.17
HMG20B-211ENST00000486028 XAGE1AQ9HD64 81 aa7.73□□□□□ -1.17
HMG20B-211ENST00000486028 KRTAP29-1A8MX34 341 aaPredicted RBP7.72□□□□□ -1.17
HMG20B-211ENST00000486028 LEPROTO15243 131 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms