RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 APOC3P02656 99 aa14.97□□□□□ -0.01
HLA-F-227ENST00000485513 CHTOPQ9Y3Y2 248 aaKnown RBP14.97□□□□□ -0.01
HLA-F-227ENST00000485513 MUC2Q02817 5179 aa14.96□□□□□ -0.01
HLA-F-227ENST00000485513 LINC00158P58513 81 aa14.95□□□□□ -0.02
HLA-F-227ENST00000485513 SNAPINO95295 136 aa14.92□□□□□ -0.02
HLA-F-227ENST00000485513 CBLN2Q8IUK8 224 aa14.92□□□□□ -0.02
HLA-F-227ENST00000485513 PLEKHB2Q96CS7 222 aa14.92□□□□□ -0.02
HLA-F-227ENST00000485513 RETNLBQ9BQ08 111 aa14.92□□□□□ -0.02
HLA-F-227ENST00000485513 TMEM223A0PJW6 202 aa14.91□□□□□ -0.02
HLA-F-227ENST00000485513 NDUFA5Q16718 116 aa14.91□□□□□ -0.02
HLA-F-227ENST00000485513 SVBPQ8N300 66 aa14.91□□□□□ -0.02
HLA-F-227ENST00000485513 TRAV12-1A0A0B4J245 112 aa14.9□□□□□ -0.02
HLA-F-227ENST00000485513 A0A0U1RRA0 63 aa14.9□□□□□ -0.02
HLA-F-227ENST00000485513 IFI27L1Q96BM0 104 aa14.9□□□□□ -0.02
HLA-F-227ENST00000485513 CHCHD1Q96BP2 118 aaKnown RBP14.89□□□□□ -0.03
HLA-F-227ENST00000485513 HIGD2AQ9BW72 106 aa14.89□□□□□ -0.03
HLA-F-227ENST00000485513 A0A0U1RQV1 116 aa14.87□□□□□ -0.03
HLA-F-227ENST00000485513 ATP6V1G1O75348 118 aa14.85□□□□□ -0.03
HLA-F-227ENST00000485513 CTAG1AP78358 180 aa14.85□□□□□ -0.03
HLA-F-227ENST00000485513 C3orf22Q8N5N4 141 aa14.85□□□□□ -0.03
HLA-F-227ENST00000485513 SMIM13P0DJ93 91 aa14.84□□□□□ -0.03
HLA-F-227ENST00000485513 YPEL4Q96NS1 127 aa14.84□□□□□ -0.03
HLA-F-227ENST00000485513 MEIG1Q5JSS6 88 aa14.83□□□□□ -0.04
HLA-F-227ENST00000485513 BOD1L2Q8IYS8 172 aa14.82□□□□□ -0.04
HLA-F-227ENST00000485513 SPRR4Q96PI1 79 aa14.81□□□□□ -0.04
HLA-F-227ENST00000485513 HERV-K104P63124 156 aa14.8□□□□□ -0.04
HLA-F-227ENST00000485513 IGLV7-46A0A075B6I9 117 aa14.79□□□□□ -0.04
HLA-F-227ENST00000485513 PRYO14603 147 aa14.79□□□□□ -0.04
HLA-F-227ENST00000485513 TPRXLQ17RH7 258 aa14.79□□□□□ -0.04
HLA-F-227ENST00000485513 MIR7-3HGQ8N6C7 128 aa14.79□□□□□ -0.04
HLA-F-227ENST00000485513 NCR3O14931 201 aa14.78□□□□□ -0.04
HLA-F-227ENST00000485513 HSBP1O75506 76 aa14.78□□□□□ -0.04
HLA-F-227ENST00000485513 CDIP1Q9H305 208 aa14.78□□□□□ -0.04
HLA-F-227ENST00000485513 ZNF706Q9Y5V0 76 aaPredicted RBP14.78□□□□□ -0.04
HLA-F-227ENST00000485513 FAM19A2Q8N3H0 131 aa14.77□□□□□ -0.05
HLA-F-227ENST00000485513 NDUFA12Q9UI09 145 aa14.77□□□□□ -0.05
HLA-F-227ENST00000485513 LINC00587B1AMM8 73 aa14.76□□□□□ -0.05
HLA-F-227ENST00000485513 SPAG11AQ6PDA7 123 aa14.76□□□□□ -0.05
HLA-F-227ENST00000485513 LINC00337Q8N6G1 96 aa14.75□□□□□ -0.05
HLA-F-227ENST00000485513 KCNQ1DNQ9H478 68 aa14.75□□□□□ -0.05
HLA-F-227ENST00000485513 MYMXA0A1B0GTQ4 84 aa14.74□□□□□ -0.05
HLA-F-227ENST00000485513 SPRR1AP35321 89 aa14.74□□□□□ -0.05
HLA-F-227ENST00000485513 H0Y8G0 127 aa14.73□□□□□ -0.05
HLA-F-227ENST00000485513 MAP1LC3CQ9BXW4 147 aa14.73□□□□□ -0.05
HLA-F-227ENST00000485513 ETDCA0A1B0GVM5 59 aa14.72□□□□□ -0.05
HLA-F-227ENST00000485513 TRBV10-3A0A0K0K1G6 114 aa14.7□□□□□ -0.06
HLA-F-227ENST00000485513 KRTAP4-16G5E9R7 235 aaPredicted RBP14.7□□□□□ -0.06
HLA-F-227ENST00000485513 C4orf48Q5BLP8 95 aa14.7□□□□□ -0.06
HLA-F-227ENST00000485513 SMCR5Q8TEV8 140 aa14.7□□□□□ -0.06
HLA-F-227ENST00000485513 PPDPFQ9H3Y8 114 aa14.7□□□□□ -0.06
HLA-F-227ENST00000485513 LEPROTL1O95214 131 aa14.67□□□□□ -0.06
HLA-F-227ENST00000485513 TSPEAR-AS2P59090 65 aa14.67□□□□□ -0.06
HLA-F-227ENST00000485513 S100A12P80511 92 aa14.67□□□□□ -0.06
HLA-F-227ENST00000485513 LEPROTO15243 131 aa14.66□□□□□ -0.06
HLA-F-227ENST00000485513 TRGC2P03986 189 aa14.66□□□□□ -0.06
HLA-F-227ENST00000485513 DAND5Q8N907 189 aa14.66□□□□□ -0.06
HLA-F-227ENST00000485513 Q8NBF4 154 aa14.66□□□□□ -0.06
HLA-F-227ENST00000485513 PLNP26678 52 aa14.64□□□□□ -0.07
HLA-F-227ENST00000485513 SERF1AO75920 110 aa14.63□□□□□ -0.07
HLA-F-227ENST00000485513 FP248Q71RG6 208 aaPredicted RBP14.63□□□□□ -0.07
HLA-F-227ENST00000485513 LOC107984156A0A0G2JMH3 177 aa14.62□□□□□ -0.07
HLA-F-227ENST00000485513 LINC00310P59036 64 aa14.62□□□□□ -0.07
HLA-F-227ENST00000485513 ARL17AQ8IVW1 177 aa14.62□□□□□ -0.07
HLA-F-227ENST00000485513 MUC17Q685J3 4493 aa14.61□□□□□ -0.07
HLA-F-227ENST00000485513 B5MCH6 92 aa14.61□□□□□ -0.07
HLA-F-227ENST00000485513 J3QQQ9 107 aa14.61□□□□□ -0.07
HLA-F-227ENST00000485513 LINC00483Q53H64 154 aa14.61□□□□□ -0.07
HLA-F-227ENST00000485513 FAT4Q6V0I7 4981 aa14.6□□□□□ -0.07
HLA-F-227ENST00000485513 TRBV10-2A0A0K0K1G8 114 aa14.6□□□□□ -0.07
HLA-F-227ENST00000485513 DDTP30046 118 aa14.6□□□□□ -0.07
HLA-F-227ENST00000485513 HSPB8Q9UJY1 196 aa14.6□□□□□ -0.07
HLA-F-227ENST00000485513 DPM2O94777 84 aa14.59□□□□□ -0.07
HLA-F-227ENST00000485513 HERVK_113P61574 105 aa14.59□□□□□ -0.07
HLA-F-227ENST00000485513 GAGE2AQ6NT46 116 aa14.59□□□□□ -0.07
HLA-F-227ENST00000485513 SPINK1P00995 79 aa14.58□□□□□ -0.08
HLA-F-227ENST00000485513 LCE2AQ5TA79 106 aaPredicted RBP14.58□□□□□ -0.08
HLA-F-227ENST00000485513 FABP4P15090 132 aa14.57□□□□□ -0.08
HLA-F-227ENST00000485513 NMUP48645 174 aa14.57□□□□□ -0.08
HLA-F-227ENST00000485513 MIEN1Q9BRT3 115 aa14.57□□□□□ -0.08
HLA-F-227ENST00000485513 ERC2-IT1O76042 136 aa14.56□□□□□ -0.08
HLA-F-227ENST00000485513 PMCHL2Q9BQD1 86 aa14.56□□□□□ -0.08
HLA-F-227ENST00000485513 SPANXB1Q9NS25 103 aaPredicted RBP14.56□□□□□ -0.08
HLA-F-227ENST00000485513 LGALS3P17931 250 aaKnown RBP14.55□□□□□ -0.08
HLA-F-227ENST00000485513 IGKCP01834 107 aa14.54□□□□□ -0.08
HLA-F-227ENST00000485513 IGLV9-49A0A0B4J1Y8 123 aa14.53□□□□□ -0.08
HLA-F-227ENST00000485513 MOBPQ13875 183 aa14.53□□□□□ -0.08
HLA-F-227ENST00000485513 Q6ZRX8 168 aa14.53□□□□□ -0.08
HLA-F-227ENST00000485513 Q9BRP9 147 aa14.53□□□□□ -0.08
HLA-F-227ENST00000485513 NDUFC2O95298 119 aa14.52□□□□□ -0.09
HLA-F-227ENST00000485513 S100A7L2Q5SY68 101 aa14.52□□□□□ -0.09
HLA-F-227ENST00000485513 KRTAP13-3Q3SY46 172 aa14.51□□□□□ -0.09
HLA-F-227ENST00000485513 IGLV6-57P01721 117 aa14.5□□□□□ -0.09
HLA-F-227ENST00000485513 SSBP3-AS1Q7Z2R9 100 aa14.5□□□□□ -0.09
HLA-F-227ENST00000485513 TRAV23DV6A0A075B6W5 121 aa14.46□□□□□ -0.09
HLA-F-227ENST00000485513 KRTAP9-2Q9BYQ4 174 aa14.46□□□□□ -0.09
HLA-F-227ENST00000485513 NPC2P61916 151 aa14.45□□□□□ -0.1
HLA-F-227ENST00000485513 RPS29P62273 56 aaKnown RBP14.45□□□□□ -0.1
HLA-F-227ENST00000485513 JOSD1Q15040 202 aaPredicted RBP14.45□□□□□ -0.1
HLA-F-227ENST00000485513 SOSTDC1Q6X4U4 206 aa14.45□□□□□ -0.1
HLA-F-227ENST00000485513 A0A0J9YXY3 114 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms