RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 C3orf22Q8N5N4 141 aa11.09□□□□□ -0.63
COL27A1-205ENST00000485397 C11orf86A6NJI1 115 aa11.08□□□□□ -0.64
COL27A1-205ENST00000485397 SNAPINO95295 136 aa11.08□□□□□ -0.64
COL27A1-205ENST00000485397 LCE2AQ5TA79 106 aaPredicted RBP11.08□□□□□ -0.64
COL27A1-205ENST00000485397 CBLN2Q8IUK8 224 aa11.08□□□□□ -0.64
COL27A1-205ENST00000485397 KRTAP9-2Q9BYQ4 174 aa11.08□□□□□ -0.64
COL27A1-205ENST00000485397 CDIP1Q9H305 208 aa11.08□□□□□ -0.64
COL27A1-205ENST00000485397 HBDP02042 147 aa11.07□□□□□ -0.64
COL27A1-205ENST00000485397 APOC3P02656 99 aa11.07□□□□□ -0.64
COL27A1-205ENST00000485397 LINC00614P0C842 121 aa11.07□□□□□ -0.64
COL27A1-205ENST00000485397 TPRXLQ17RH7 258 aa11.07□□□□□ -0.64
COL27A1-205ENST00000485397 C18orf32Q8TCD1 76 aa11.07□□□□□ -0.64
COL27A1-205ENST00000485397 RPS10P5Q9NQ39 176 aa11.07□□□□□ -0.64
COL27A1-205ENST00000485397 TMEM170BQ5T4T1 132 aa11.06□□□□□ -0.64
COL27A1-205ENST00000485397 BAGE3Q86Y29 109 aa11.06□□□□□ -0.64
COL27A1-205ENST00000485397 HIGD2AQ9BW72 106 aa11.06□□□□□ -0.64
COL27A1-205ENST00000485397 TRAPPC1Q9Y5R8 145 aa11.04□□□□□ -0.64
COL27A1-205ENST00000485397 A0A0U1RRA0 63 aa11.03□□□□□ -0.64
COL27A1-205ENST00000485397 LINC00158P58513 81 aa11.03□□□□□ -0.64
COL27A1-205ENST00000485397 CTAG1AP78358 180 aa11.03□□□□□ -0.64
COL27A1-205ENST00000485397 SFTA2Q6UW10 78 aa11.01□□□□□ -0.65
COL27A1-205ENST00000485397 SPRR4Q96PI1 79 aa11.01□□□□□ -0.65
COL27A1-205ENST00000485397 PPDPFQ9H3Y8 114 aa11.01□□□□□ -0.65
COL27A1-205ENST00000485397 SLC7A5P1Q8MH63 180 aa11□□□□□ -0.65
COL27A1-205ENST00000485397 CHTOPQ9Y3Y2 248 aaKnown RBP10.99□□□□□ -0.65
COL27A1-205ENST00000485397 SPAG11AQ6PDA7 123 aa10.97□□□□□ -0.65
COL27A1-205ENST00000485397 TMEM223A0PJW6 202 aa10.96□□□□□ -0.65
COL27A1-205ENST00000485397 SMIM13P0DJ93 91 aa10.96□□□□□ -0.65
COL27A1-205ENST00000485397 BOD1L2Q8IYS8 172 aa10.94□□□□□ -0.66
COL27A1-205ENST00000485397 DAND5Q8N907 189 aa10.94□□□□□ -0.66
COL27A1-205ENST00000485397 ZNF706Q9Y5V0 76 aaPredicted RBP10.94□□□□□ -0.66
COL27A1-205ENST00000485397 PRYO14603 147 aa10.93□□□□□ -0.66
COL27A1-205ENST00000485397 NCR3O14931 201 aa10.93□□□□□ -0.66
COL27A1-205ENST00000485397 ATP6V1G1O75348 118 aa10.93□□□□□ -0.66
COL27A1-205ENST00000485397 C4orf48Q5BLP8 95 aa10.93□□□□□ -0.66
COL27A1-205ENST00000485397 SMCR5Q8TEV8 140 aa10.93□□□□□ -0.66
COL27A1-205ENST00000485397 MEIG1Q5JSS6 88 aa10.92□□□□□ -0.66
COL27A1-205ENST00000485397 MIR7-3HGQ8N6C7 128 aa10.92□□□□□ -0.66
COL27A1-205ENST00000485397 Q8NBF4 154 aa10.92□□□□□ -0.66
COL27A1-205ENST00000485397 TRAV12-1A0A0B4J245 112 aa10.91□□□□□ -0.66
COL27A1-205ENST00000485397 SPRR1AP35321 89 aa10.91□□□□□ -0.66
COL27A1-205ENST00000485397 FP248Q71RG6 208 aaPredicted RBP10.91□□□□□ -0.66
COL27A1-205ENST00000485397 LINC00337Q8N6G1 96 aa10.91□□□□□ -0.66
COL27A1-205ENST00000485397 IFI27L1Q96BM0 104 aa10.91□□□□□ -0.66
COL27A1-205ENST00000485397 KCNQ1DNQ9H478 68 aa10.9□□□□□ -0.66
COL27A1-205ENST00000485397 KRTAP4-16G5E9R7 235 aaPredicted RBP10.89□□□□□ -0.67
COL27A1-205ENST00000485397 TRBV10-3A0A0K0K1G6 114 aa10.88□□□□□ -0.67
COL27A1-205ENST00000485397 ETDCA0A1B0GVM5 59 aa10.87□□□□□ -0.67
COL27A1-205ENST00000485397 KRTAP13-3Q3SY46 172 aa10.87□□□□□ -0.67
COL27A1-205ENST00000485397 CHCHD1Q96BP2 118 aaKnown RBP10.87□□□□□ -0.67
COL27A1-205ENST00000485397 HERV-K104P63124 156 aa10.86□□□□□ -0.67
COL27A1-205ENST00000485397 NDUFA12Q9UI09 145 aa10.86□□□□□ -0.67
COL27A1-205ENST00000485397 S100A1P23297 94 aa10.85□□□□□ -0.67
COL27A1-205ENST00000485397 LINC00483Q53H64 154 aa10.84□□□□□ -0.67
COL27A1-205ENST00000485397 GAGE2AQ6NT46 116 aa10.84□□□□□ -0.67
COL27A1-205ENST00000485397 YPEL4Q96NS1 127 aa10.84□□□□□ -0.67
COL27A1-205ENST00000485397 SPINK1P00995 79 aa10.83□□□□□ -0.68
COL27A1-205ENST00000485397 MYMXA0A1B0GTQ4 84 aa10.82□□□□□ -0.68
COL27A1-205ENST00000485397 LINC00587B1AMM8 73 aa10.82□□□□□ -0.68
COL27A1-205ENST00000485397 ERC2-IT1O76042 136 aa10.82□□□□□ -0.68
COL27A1-205ENST00000485397 FAM19A2Q8N3H0 131 aa10.82□□□□□ -0.68
COL27A1-205ENST00000485397 B5MCH6 92 aa10.81□□□□□ -0.68
COL27A1-205ENST00000485397 ASB16-AS1Q495Z4 193 aa10.81□□□□□ -0.68
COL27A1-205ENST00000485397 MAP1LC3CQ9BXW4 147 aa10.81□□□□□ -0.68
COL27A1-205ENST00000485397 H0Y8G0 127 aa10.8□□□□□ -0.68
COL27A1-205ENST00000485397 TSPEAR-AS2P59090 65 aa10.8□□□□□ -0.68
COL27A1-205ENST00000485397 MOBPQ13875 183 aa10.8□□□□□ -0.68
COL27A1-205ENST00000485397 IGLV9-49A0A0B4J1Y8 123 aa10.79□□□□□ -0.68
COL27A1-205ENST00000485397 KRTAP9-6A0A140TA67 174 aa10.79□□□□□ -0.68
COL27A1-205ENST00000485397 KRTAP4-1Q9BYQ7 146 aa10.79□□□□□ -0.68
COL27A1-205ENST00000485397 HSBP1O75506 76 aa10.78□□□□□ -0.68
COL27A1-205ENST00000485397 DDTP30046 118 aa10.78□□□□□ -0.68
COL27A1-205ENST00000485397 S100A12P80511 92 aa10.78□□□□□ -0.68
COL27A1-205ENST00000485397 Q9BRP9 147 aa10.77□□□□□ -0.69
COL27A1-205ENST00000485397 LOC107984156A0A0G2JMH3 177 aa10.76□□□□□ -0.69
COL27A1-205ENST00000485397 SSBP3-AS1Q7Z2R9 100 aa10.76□□□□□ -0.69
COL27A1-205ENST00000485397 ARL17AQ8IVW1 177 aa10.76□□□□□ -0.69
COL27A1-205ENST00000485397 Q8N377 158 aa10.76□□□□□ -0.69
COL27A1-205ENST00000485397 TRBV10-2A0A0K0K1G8 114 aa10.75□□□□□ -0.69
COL27A1-205ENST00000485397 LEPROTO15243 131 aa10.75□□□□□ -0.69
COL27A1-205ENST00000485397 SEC61BP60468 96 aaKnown RBP10.73□□□□□ -0.69
COL27A1-205ENST00000485397 Q6ZRX8 168 aa10.73□□□□□ -0.69
COL27A1-205ENST00000485397 RPS29P62273 56 aaKnown RBP10.72□□□□□ -0.69
COL27A1-205ENST00000485397 J3QQQ9 107 aa10.71□□□□□ -0.69
COL27A1-205ENST00000485397 LEPROTL1O95214 131 aa10.71□□□□□ -0.69
COL27A1-205ENST00000485397 TRGC2P03986 189 aa10.71□□□□□ -0.69
COL27A1-205ENST00000485397 SPANXB1Q9NS25 103 aaPredicted RBP10.71□□□□□ -0.69
COL27A1-205ENST00000485397 IGLV6-57P01721 117 aa10.7□□□□□ -0.7
COL27A1-205ENST00000485397 LINC01547P58512 204 aaPredicted RBP10.7□□□□□ -0.7
COL27A1-205ENST00000485397 LINC00310P59036 64 aa10.7□□□□□ -0.7
COL27A1-205ENST00000485397 SLC25A20O43772 301 aa10.69□□□□□ -0.7
COL27A1-205ENST00000485397 S100A7L2Q5SY68 101 aa10.69□□□□□ -0.7
COL27A1-205ENST00000485397 PMCHL2Q9BQD1 86 aa10.69□□□□□ -0.7
COL27A1-205ENST00000485397 MIEN1Q9BRT3 115 aa10.69□□□□□ -0.7
COL27A1-205ENST00000485397 COLCA2A8K830 154 aa10.68□□□□□ -0.7
COL27A1-205ENST00000485397 SERF1AO75920 110 aa10.68□□□□□ -0.7
COL27A1-205ENST00000485397 PLNP26678 52 aa10.68□□□□□ -0.7
COL27A1-205ENST00000485397 NDUFC2O95298 119 aa10.67□□□□□ -0.7
COL27A1-205ENST00000485397 LGALS3P17931 250 aaKnown RBP10.67□□□□□ -0.7
COL27A1-205ENST00000485397 HERVK_113P61574 105 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms