RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 TCL1BO95988 128 aa5.93□□□□□ -1.46
CDC42SE1-204ENST00000483763 C10orf25Q5T742 122 aa5.93□□□□□ -1.46
CDC42SE1-204ENST00000483763 LYRM7Q5U5X0 104 aa5.93□□□□□ -1.46
CDC42SE1-204ENST00000483763 LINC00588Q9Y4M8 146 aa5.93□□□□□ -1.46
CDC42SE1-204ENST00000483763 TRIAP1O43715 76 aa5.92□□□□□ -1.46
CDC42SE1-204ENST00000483763 LINC00336Q6ZUF6 198 aa5.92□□□□□ -1.46
CDC42SE1-204ENST00000483763 IGKV2-28A0A075B6P5 120 aa5.92□□□□□ -1.46
CDC42SE1-204ENST00000483763 IGKV2D-28P01615 120 aa5.92□□□□□ -1.46
CDC42SE1-204ENST00000483763 CRPP02741 224 aa5.92□□□□□ -1.46
CDC42SE1-204ENST00000483763 PSMB2P49721 201 aa5.92□□□□□ -1.46
CDC42SE1-204ENST00000483763 CCL18P55774 89 aa5.92□□□□□ -1.46
CDC42SE1-204ENST00000483763 Q1RN00 199 aa5.92□□□□□ -1.46
CDC42SE1-204ENST00000483763 LINC01620Q4KN68 170 aa5.92□□□□□ -1.46
CDC42SE1-204ENST00000483763 LINC01556Q5JQF7 62 aa5.92□□□□□ -1.46
CDC42SE1-204ENST00000483763 SNCGO76070 127 aa5.91□□□□□ -1.46
CDC42SE1-204ENST00000483763 C1orf195Q5TG92 126 aa5.91□□□□□ -1.46
CDC42SE1-204ENST00000483763 UNQ6190/PRO20217Q6UXQ8 127 aa5.91□□□□□ -1.46
CDC42SE1-204ENST00000483763 LINC01600Q96MT4 127 aa5.91□□□□□ -1.46
CDC42SE1-204ENST00000483763 DNAH1Q9P2D7 4330 aa5.91□□□□□ -1.46
CDC42SE1-204ENST00000483763 RYR3Q15413 4870 aa5.91□□□□□ -1.46
CDC42SE1-204ENST00000483763 USP17L23D6RBM5 183 aa5.91□□□□□ -1.46
CDC42SE1-204ENST00000483763 SCGB1C2P0DMR2 95 aa5.91□□□□□ -1.46
CDC42SE1-204ENST00000483763 RPL13AP40429 203 aaKnown RBP5.91□□□□□ -1.46
CDC42SE1-204ENST00000483763 ANKRD29Q8N6D5 301 aa5.91□□□□□ -1.46
CDC42SE1-204ENST00000483763 KLK5Q9Y337 293 aaPredicted RBP5.91□□□□□ -1.46
CDC42SE1-204ENST00000483763 STARD9Q9P2P6 4700 aa5.9□□□□□ -1.46
CDC42SE1-204ENST00000483763 TRAV8-4A0A0B4J246 113 aa5.9□□□□□ -1.46
CDC42SE1-204ENST00000483763 SPAG11BQ08648 103 aa5.9□□□□□ -1.46
CDC42SE1-204ENST00000483763 LINC00337Q8N6G1 96 aa5.9□□□□□ -1.46
CDC42SE1-204ENST00000483763 SND1-IT1Q9HBX3 110 aa5.9□□□□□ -1.46
CDC42SE1-204ENST00000483763 DNAH10OSP0CZ25 163 aa5.89□□□□□ -1.47
CDC42SE1-204ENST00000483763 C15orf53Q8NAA6 179 aa5.89□□□□□ -1.47
CDC42SE1-204ENST00000483763 TRBV30A0A0K0K1B3 111 aa5.89□□□□□ -1.47
CDC42SE1-204ENST00000483763 Q5XG85 94 aa5.89□□□□□ -1.47
CDC42SE1-204ENST00000483763 PRR3P79522 188 aaKnown RBP5.88□□□□□ -1.47
CDC42SE1-204ENST00000483763 FAM236DA0A1B0GTK5 79 aa5.88□□□□□ -1.47
CDC42SE1-204ENST00000483763 FAM236CP0DP71 79 aa5.88□□□□□ -1.47
CDC42SE1-204ENST00000483763 HIGD2BQ4VC39 106 aa5.88□□□□□ -1.47
CDC42SE1-204ENST00000483763 Q8NDZ9 215 aa5.88□□□□□ -1.47
CDC42SE1-204ENST00000483763 COPS9Q8WXC6 57 aa5.88□□□□□ -1.47
CDC42SE1-204ENST00000483763 Q9HAA7 133 aa5.88□□□□□ -1.47
CDC42SE1-204ENST00000483763 DNAH10Q8IVF4 4471 aa5.88□□□□□ -1.47
CDC42SE1-204ENST00000483763 FAM236AA0A1B0GUQ0 79 aa5.87□□□□□ -1.47
CDC42SE1-204ENST00000483763 FAM236BA0A1B0GV22 79 aa5.87□□□□□ -1.47
CDC42SE1-204ENST00000483763 CXCL5P42830 114 aa5.87□□□□□ -1.47
CDC42SE1-204ENST00000483763 C15orf56Q8N910 161 aa5.87□□□□□ -1.47
CDC42SE1-204ENST00000483763 PLECQ15149 4684 aaKnown RBP5.87□□□□□ -1.47
CDC42SE1-204ENST00000483763 IGKV2D-24A0A075B6R9 120 aa5.87□□□□□ -1.47
CDC42SE1-204ENST00000483763 C9orf153Q5TBE3 101 aa5.87□□□□□ -1.47
CDC42SE1-204ENST00000483763 FAM19A1Q7Z5A9 133 aa5.87□□□□□ -1.47
CDC42SE1-204ENST00000483763 NTN5Q8WTR8 489 aaPredicted RBP5.87□□□□□ -1.47
CDC42SE1-204ENST00000483763 CLEC2BQ92478 149 aa5.87□□□□□ -1.47
CDC42SE1-204ENST00000483763 LINC00528Q8N1L1 170 aa5.86□□□□□ -1.47
CDC42SE1-204ENST00000483763 C6orf48Q9UBA6 75 aa5.86□□□□□ -1.47
CDC42SE1-204ENST00000483763 HYDINQ4G0P3 5121 aa5.86□□□□□ -1.47
CDC42SE1-204ENST00000483763 DYNC2H1Q8NCM8 4307 aaKnown RBP5.86□□□□□ -1.47
CDC42SE1-204ENST00000483763 SLC25A20O43772 301 aa5.86□□□□□ -1.47
CDC42SE1-204ENST00000483763 COX17Q14061 63 aa5.86□□□□□ -1.47
CDC42SE1-204ENST00000483763 CASC10Q5T4H9 136 aa5.86□□□□□ -1.47
CDC42SE1-204ENST00000483763 VPREB1P12018 145 aa5.85□□□□□ -1.47
CDC42SE1-204ENST00000483763 A0A0A0MQY5 61 aa5.84□□□□□ -1.47
CDC42SE1-204ENST00000483763 C3orf22Q8N5N4 141 aa5.84□□□□□ -1.47
CDC42SE1-204ENST00000483763 KRTAP1-5Q9BYS1 174 aa5.84□□□□□ -1.47
CDC42SE1-204ENST00000483763 TRAV13-2A0A0B4J235 113 aa5.84□□□□□ -1.48
CDC42SE1-204ENST00000483763 SMIM11BQ8TCY0 68 aa5.84□□□□□ -1.48
CDC42SE1-204ENST00000483763 UPK3BQ9BT76 320 aa5.84□□□□□ -1.48
CDC42SE1-204ENST00000483763 ATXN8Q156A1 80 aa5.83□□□□□ -1.48
CDC42SE1-204ENST00000483763 Q6ZRU5 148 aa5.83□□□□□ -1.48
CDC42SE1-204ENST00000483763 DPH3Q96FX2 82 aa5.83□□□□□ -1.48
CDC42SE1-204ENST00000483763 FAM218AQ96MZ4 157 aa5.83□□□□□ -1.48
CDC42SE1-204ENST00000483763 APLNQ9ULZ1 77 aa5.83□□□□□ -1.48
CDC42SE1-204ENST00000483763 GVQW2A0A096LPI5 108 aaPredicted RBP5.82□□□□□ -1.48
CDC42SE1-204ENST00000483763 LST1O00453 97 aa5.82□□□□□ -1.48
CDC42SE1-204ENST00000483763 UQCRQO14949 82 aa5.82□□□□□ -1.48
CDC42SE1-204ENST00000483763 COX6CP09669 75 aa5.82□□□□□ -1.48
CDC42SE1-204ENST00000483763 CAMK2N2Q96S95 79 aa5.82□□□□□ -1.48
CDC42SE1-204ENST00000483763 XAGE1AQ9HD64 81 aa5.82□□□□□ -1.48
CDC42SE1-204ENST00000483763 SLPIP03973 132 aa5.82□□□□□ -1.48
CDC42SE1-204ENST00000483763 H3BS24 57 aa5.81□□□□□ -1.48
CDC42SE1-204ENST00000483763 RPL28P46779 137 aaKnown RBP5.81□□□□□ -1.48
CDC42SE1-204ENST00000483763 UBE2DNLQ8IWF7 75 aa5.81□□□□□ -1.48
CDC42SE1-204ENST00000483763 NUPR2A6NF83 97 aa5.81□□□□□ -1.48
CDC42SE1-204ENST00000483763 GAGE2AQ6NT46 116 aa5.81□□□□□ -1.48
CDC42SE1-204ENST00000483763 SACSQ9NZJ4 4579 aa5.8□□□□□ -1.48
CDC42SE1-204ENST00000483763 NCR3O14931 201 aa5.8□□□□□ -1.48
CDC42SE1-204ENST00000483763 NDUFC2O95298 119 aa5.8□□□□□ -1.48
CDC42SE1-204ENST00000483763 WWC2-AS2Q96NR7 200 aa5.8□□□□□ -1.48
CDC42SE1-204ENST00000483763 FAM240AA0A1B0GVK7 77 aa5.8□□□□□ -1.48
CDC42SE1-204ENST00000483763 LECT2O14960 151 aa5.8□□□□□ -1.48
CDC42SE1-204ENST00000483763 OXTP01178 125 aa5.8□□□□□ -1.48
CDC42SE1-204ENST00000483763 TRBV7-7A0A0K0K1E9 115 aa5.79□□□□□ -1.48
CDC42SE1-204ENST00000483763 TRBV10-2A0A0K0K1G8 114 aa5.79□□□□□ -1.48
CDC42SE1-204ENST00000483763 C2orf48Q96LS8 159 aa5.79□□□□□ -1.48
CDC42SE1-204ENST00000483763 KMT2AQ03164 3969 aa5.79□□□□□ -1.48
CDC42SE1-204ENST00000483763 Q6ZRP5 223 aa5.79□□□□□ -1.48
CDC42SE1-204ENST00000483763 RYR2Q92736 4967 aa5.78□□□□□ -1.48
CDC42SE1-204ENST00000483763 A0A087WYN8 130 aa5.78□□□□□ -1.48
CDC42SE1-204ENST00000483763 TEX49A0A1B0GTD5 131 aa5.78□□□□□ -1.48
CDC42SE1-204ENST00000483763 TMEM258P61165 79 aa5.78□□□□□ -1.48
CDC42SE1-204ENST00000483763 CD164Q04900 197 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms