RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 MIAQ16674 131 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 AMN1Q8IY45 258 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 C1orf64Q8NEQ6 169 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 BORCS7Q96B45 105 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 TMEM191AQ9H0A3 160 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 RNASE7Q9H1E1 156 aaKnown RBP2.79□□□□□ -1.96
UPF3A-205ENST00000479712 NAT8Q9UHE5 227 aa2.79□□□□□ -1.96
UPF3A-205ENST00000479712 MUC21A0A0G2JKD1 596 aa2.78□□□□□ -1.96
UPF3A-205ENST00000479712 MUC21A0A140T8X8 626 aa2.78□□□□□ -1.96
UPF3A-205ENST00000479712 A0A1B0GUT8 65 aa2.78□□□□□ -1.96
UPF3A-205ENST00000479712 K7ERS5 55 aa2.78□□□□□ -1.96
UPF3A-205ENST00000479712 PPP1R17O96001 155 aa2.78□□□□□ -1.96
UPF3A-205ENST00000479712 S100A8P05109 93 aa2.78□□□□□ -1.96
UPF3A-205ENST00000479712 MGPP08493 103 aa2.78□□□□□ -1.96
UPF3A-205ENST00000479712 KRTAP2-3P0C7H8 128 aa2.78□□□□□ -1.96
UPF3A-205ENST00000479712 COTL1Q14019 142 aa2.78□□□□□ -1.96
UPF3A-205ENST00000479712 Q8N814 137 aa2.78□□□□□ -1.96
UPF3A-205ENST00000479712 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
UPF3A-205ENST00000479712 KRTAP2-4Q9BYR9 128 aa2.78□□□□□ -1.96
UPF3A-205ENST00000479712 V9GYV3 84 aa2.78□□□□□ -1.96
UPF3A-205ENST00000479712 SMIM27A0A1W2PRY6 76 aa2.77□□□□□ -1.97
UPF3A-205ENST00000479712 LINC00862A6NCI5 91 aa2.77□□□□□ -1.97
UPF3A-205ENST00000479712 HIGD1CA8MV81 97 aa2.77□□□□□ -1.97
UPF3A-205ENST00000479712 TMEM262E9PQX1 116 aa2.77□□□□□ -1.97
UPF3A-205ENST00000479712 CRPP02741 224 aa2.77□□□□□ -1.97
UPF3A-205ENST00000479712 ZNF25P17030 456 aaPredicted RBP2.77□□□□□ -1.97
UPF3A-205ENST00000479712 ENHOQ6UWT2 76 aa2.77□□□□□ -1.97
UPF3A-205ENST00000479712 UBE2WQ96B02 151 aa2.77□□□□□ -1.97
UPF3A-205ENST00000479712 NAT8BQ9UHF3 227 aa2.77□□□□□ -1.97
UPF3A-205ENST00000479712 TRAPPC1Q9Y5R8 145 aa2.77□□□□□ -1.97
UPF3A-205ENST00000479712 TRBV27A0A0K0K1C4 114 aa2.76□□□□□ -1.97
UPF3A-205ENST00000479712 SDHAF1A6NFY7 115 aa2.76□□□□□ -1.97
UPF3A-205ENST00000479712 I3L3M4 83 aa2.76□□□□□ -1.97
UPF3A-205ENST00000479712 ANGP03950 147 aaKnown RBP2.76□□□□□ -1.97
UPF3A-205ENST00000479712 CEBPGP53567 150 aa2.76□□□□□ -1.97
UPF3A-205ENST00000479712 POLR2KP53803 58 aaKnown RBP2.76□□□□□ -1.97
UPF3A-205ENST00000479712 RAB14P61106 215 aa2.76□□□□□ -1.97
UPF3A-205ENST00000479712 MT1HP80294 61 aa2.76□□□□□ -1.97
UPF3A-205ENST00000479712 SMAGPQ0VAQ4 97 aa2.76□□□□□ -1.97
UPF3A-205ENST00000479712 CLLU1Q5K131 121 aa2.76□□□□□ -1.97
UPF3A-205ENST00000479712 KRTAP26-1Q6PEX3 210 aa2.76□□□□□ -1.97
UPF3A-205ENST00000479712 ATP5L2Q7Z4Y8 100 aa2.76□□□□□ -1.97
UPF3A-205ENST00000479712 BOD1L2Q8IYS8 172 aa2.76□□□□□ -1.97
UPF3A-205ENST00000479712 NUP35Q8NFH5 326 aa2.76□□□□□ -1.97
UPF3A-205ENST00000479712 TRBV24-1A0A075B6N3 115 aa2.75□□□□□ -1.97
UPF3A-205ENST00000479712 UBE2L6O14933 153 aa2.75□□□□□ -1.97
UPF3A-205ENST00000479712 CCL25O15444 150 aa2.75□□□□□ -1.97
UPF3A-205ENST00000479712 PPBPP02775 128 aa2.75□□□□□ -1.97
UPF3A-205ENST00000479712 ESDP10768 282 aa2.75□□□□□ -1.97
UPF3A-205ENST00000479712 S100A2P29034 98 aa2.75□□□□□ -1.97
UPF3A-205ENST00000479712 WFDC2Q14508 124 aa2.75□□□□□ -1.97
UPF3A-205ENST00000479712 ADIRFQ15847 76 aa2.75□□□□□ -1.97
UPF3A-205ENST00000479712 LINC00269Q8N2A0 174 aa2.75□□□□□ -1.97
UPF3A-205ENST00000479712 C20orf78Q9BR46 151 aa2.75□□□□□ -1.97
UPF3A-205ENST00000479712 ST20Q9HBF5 79 aa2.75□□□□□ -1.97
UPF3A-205ENST00000479712 TRAV26-2A0A0B4J265 109 aa2.74□□□□□ -1.97
UPF3A-205ENST00000479712 F8W036 122 aa2.74□□□□□ -1.97
UPF3A-205ENST00000479712 MT-ND4LP03901 98 aa2.74□□□□□ -1.97
UPF3A-205ENST00000479712 FGF6P10767 208 aa2.74□□□□□ -1.97
UPF3A-205ENST00000479712 CNBPP62633 177 aaKnown RBP2.74□□□□□ -1.97
UPF3A-205ENST00000479712 HBBP68871 147 aa2.74□□□□□ -1.97
UPF3A-205ENST00000479712 AMMECR1LQ6DCA0 310 aa2.74□□□□□ -1.97
UPF3A-205ENST00000479712 RPL39LQ96EH5 51 aaKnown RBP2.74□□□□□ -1.97
UPF3A-205ENST00000479712 BTF3L4Q96K17 158 aa2.74□□□□□ -1.97
UPF3A-205ENST00000479712 TIMM21Q9BVV7 248 aa2.74□□□□□ -1.97
UPF3A-205ENST00000479712 LAMTOR2Q9Y2Q5 125 aa2.74□□□□□ -1.97
UPF3A-205ENST00000479712 TRAV9-1A0A075B6T8 112 aa2.73□□□□□ -1.97
UPF3A-205ENST00000479712 C7orf77A4D0Y5 90 aa2.73□□□□□ -1.97
UPF3A-205ENST00000479712 C8orf87E5RJ46 101 aa2.73□□□□□ -1.97
UPF3A-205ENST00000479712 H3BQ85 93 aa2.73□□□□□ -1.97
UPF3A-205ENST00000479712 MRPL51Q4U2R6 128 aaKnown RBP2.73□□□□□ -1.97
UPF3A-205ENST00000479712 C9orf163Q8N9P6 203 aa2.73□□□□□ -1.97
UPF3A-205ENST00000479712 OR5A1Q8NGJ0 315 aa2.73□□□□□ -1.97
UPF3A-205ENST00000479712 IMMP2LQ96T52 175 aa2.73□□□□□ -1.97
UPF3A-205ENST00000479712 PKIGQ9Y2B9 76 aa2.73□□□□□ -1.97
UPF3A-205ENST00000479712 GVQW2A0A096LPI5 108 aaPredicted RBP2.72□□□□□ -1.97
UPF3A-205ENST00000479712 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.72□□□□□ -1.97
UPF3A-205ENST00000479712 K7EMI3 77 aa2.72□□□□□ -1.97
UPF3A-205ENST00000479712 LECT2O14960 151 aa2.72□□□□□ -1.97
UPF3A-205ENST00000479712 FCER1GP30273 86 aa2.72□□□□□ -1.97
UPF3A-205ENST00000479712 CKS2P33552 79 aa2.72□□□□□ -1.97
UPF3A-205ENST00000479712 MP68P56378 58 aa2.72□□□□□ -1.97
UPF3A-205ENST00000479712 CIRBPQ14011 172 aaKnown RBP2.72□□□□□ -1.97
UPF3A-205ENST00000479712 PDZD11Q5EBL8 140 aa2.72□□□□□ -1.97
UPF3A-205ENST00000479712 FAM19A3Q7Z5A8 133 aa2.72□□□□□ -1.97
UPF3A-205ENST00000479712 SMIM2Q9BVW6 85 aa2.72□□□□□ -1.97
UPF3A-205ENST00000479712 SEC11CQ9BY50 192 aa2.72□□□□□ -1.97
UPF3A-205ENST00000479712 CDC42SE2Q9NRR3 84 aa2.72□□□□□ -1.97
UPF3A-205ENST00000479712 SPANXA1Q9NS26 97 aa2.72□□□□□ -1.97
UPF3A-205ENST00000479712 TMEM242Q9NWH2 141 aa2.72□□□□□ -1.97
UPF3A-205ENST00000479712 R4GN34 69 aa2.72□□□□□ -1.97
UPF3A-205ENST00000479712 IGLV10-54A0A075B6I4 117 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 IGHV3-64A0A075B6Q5 118 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.71□□□□□ -1.98
UPF3A-205ENST00000479712 A0A0B4J2C4 111 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 IGHV1-58A0A0C4DH39 117 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 LINC00959A0A1B0GUT2 108 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 IGKV2-29A2NJV5 120 aaPredicted RBP2.71□□□□□ -1.98
UPF3A-205ENST00000479712 TMEM218A2RU14 115 aa2.71□□□□□ -1.98
UPF3A-205ENST00000479712 A8MWP4 228 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 192.4 ms