RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 NPC2P61916 151 aa8.33□□□□□ -1.08
CHD3-210ENST00000479080 GAGE2BQ13066 116 aa8.33□□□□□ -1.08
CHD3-210ENST00000479080 CIRBPQ14011 172 aaKnown RBP8.33□□□□□ -1.08
CHD3-210ENST00000479080 MIEN1Q9BRT3 115 aa8.33□□□□□ -1.08
CHD3-210ENST00000479080 IGKV2-24A0A0C4DH68 120 aa8.32□□□□□ -1.08
CHD3-210ENST00000479080 FAM168BA1KXE4 195 aa8.32□□□□□ -1.08
CHD3-210ENST00000479080 Q6ZSA8 131 aa8.32□□□□□ -1.08
CHD3-210ENST00000479080 PCLOQ9Y6V0 5065 aa8.31□□□□□ -1.08
CHD3-210ENST00000479080 LOC107984156A0A0G2JMH3 177 aa8.31□□□□□ -1.08
CHD3-210ENST00000479080 TMEM238C9JI98 176 aa8.31□□□□□ -1.08
CHD3-210ENST00000479080 SERTAD4-AS1Q5TG53 156 aa8.31□□□□□ -1.08
CHD3-210ENST00000479080 ARL17AQ8IVW1 177 aa8.31□□□□□ -1.08
CHD3-210ENST00000479080 LINC00308Q8TCZ7 52 aa8.31□□□□□ -1.08
CHD3-210ENST00000479080 SPACA4Q8TDM5 124 aa8.31□□□□□ -1.08
CHD3-210ENST00000479080 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
CHD3-210ENST00000479080 LINC00587B1AMM8 73 aa8.29□□□□□ -1.08
CHD3-210ENST00000479080 EPM2AB3EWF7 344 aa8.29□□□□□ -1.08
CHD3-210ENST00000479080 MUSTN1Q8IVN3 82 aa8.29□□□□□ -1.08
CHD3-210ENST00000479080 KIAA1109Q2LD37 5005 aa8.28□□□□□ -1.08
CHD3-210ENST00000479080 VPREB1P12018 145 aa8.28□□□□□ -1.08
CHD3-210ENST00000479080 HNRNPA3P51991 378 aaKnown RBP8.28□□□□□ -1.08
CHD3-210ENST00000479080 HSPG2P98160 4391 aa8.28□□□□□ -1.08
CHD3-210ENST00000479080 TSTD3H0UI37 97 aa8.27□□□□□ -1.09
CHD3-210ENST00000479080 HAMPP81172 84 aa8.27□□□□□ -1.09
CHD3-210ENST00000479080 FAT1Q14517 4588 aa8.26□□□□□ -1.09
CHD3-210ENST00000479080 PRR3P79522 188 aaKnown RBP8.26□□□□□ -1.09
CHD3-210ENST00000479080 Q6ZVH6 145 aa8.26□□□□□ -1.09
CHD3-210ENST00000479080 PPDPFQ9H3Y8 114 aa8.26□□□□□ -1.09
CHD3-210ENST00000479080 PLA2G2DQ9UNK4 145 aa8.26□□□□□ -1.09
CHD3-210ENST00000479080 IGLV5-37A0A075B6J1 123 aa8.25□□□□□ -1.09
CHD3-210ENST00000479080 IGKV2-28A0A075B6P5 120 aa8.25□□□□□ -1.09
CHD3-210ENST00000479080 A0A087WYN8 130 aa8.25□□□□□ -1.09
CHD3-210ENST00000479080 IGKV2D-28P01615 120 aa8.25□□□□□ -1.09
CHD3-210ENST00000479080 IFITM1P13164 125 aa8.25□□□□□ -1.09
CHD3-210ENST00000479080 FXYD2P54710 66 aa8.25□□□□□ -1.09
CHD3-210ENST00000479080 CTAG1AP78358 180 aa8.25□□□□□ -1.09
CHD3-210ENST00000479080 HSD52Q0P140 79 aa8.25□□□□□ -1.09
CHD3-210ENST00000479080 SRSF9Q13242 221 aaKnown RBP eCLIP8.25□□□□□ -1.09
CHD3-210ENST00000479080 FAM19A5Q7Z5A7 132 aaPredicted RBP8.25□□□□□ -1.09
CHD3-210ENST00000479080 HIST1H4GQ99525 98 aa8.25□□□□□ -1.09
CHD3-210ENST00000479080 DDTP30046 118 aa8.24□□□□□ -1.09
CHD3-210ENST00000479080 TAL2Q16559 108 aa8.24□□□□□ -1.09
CHD3-210ENST00000479080 SCXQ7RTU7 201 aa8.24□□□□□ -1.09
CHD3-210ENST00000479080 CEND1Q8N111 149 aa8.24□□□□□ -1.09
CHD3-210ENST00000479080 PLAC8Q9NZF1 115 aa8.24□□□□□ -1.09
CHD3-210ENST00000479080 PKIGQ9Y2B9 76 aa8.24□□□□□ -1.09
CHD3-210ENST00000479080 A4D1N5 150 aa8.23□□□□□ -1.09
CHD3-210ENST00000479080 NCR3O14931 201 aa8.23□□□□□ -1.09
CHD3-210ENST00000479080 KRTAP11-1Q8IUC1 163 aa8.23□□□□□ -1.09
CHD3-210ENST00000479080 CIRBP-AS1Q8TBR5 109 aa8.23□□□□□ -1.09
CHD3-210ENST00000479080 XGP55808 180 aa8.22□□□□□ -1.09
CHD3-210ENST00000479080 LINC00474Q9P2X8 69 aa8.22□□□□□ -1.09
CHD3-210ENST00000479080 NDUFC2O95298 119 aa8.21□□□□□ -1.1
CHD3-210ENST00000479080 BVES-AS1Q5T3Y7 98 aa8.21□□□□□ -1.1
CHD3-210ENST00000479080 PHF5AQ7RTV0 110 aaKnown RBP8.21□□□□□ -1.1
CHD3-210ENST00000479080 LINC00337Q8N6G1 96 aa8.21□□□□□ -1.1
CHD3-210ENST00000479080 C7orf33Q8WU49 177 aa8.21□□□□□ -1.1
CHD3-210ENST00000479080 C22orf24Q9Y442 160 aa8.21□□□□□ -1.1
CHD3-210ENST00000479080 M0QXV9 152 aa8.2□□□□□ -1.1
CHD3-210ENST00000479080 HERC2O95714 4834 aa8.19□□□□□ -1.1
CHD3-210ENST00000479080 HINT1P49773 126 aaPredicted RBP8.19□□□□□ -1.1
CHD3-210ENST00000479080 CFC1BP0CG36 223 aa8.18□□□□□ -1.1
CHD3-210ENST00000479080 CFC1P0CG37 223 aa8.18□□□□□ -1.1
CHD3-210ENST00000479080 LINC00167Q96N53 147 aa8.18□□□□□ -1.1
CHD3-210ENST00000479080 TRBV10-2A0A0K0K1G8 114 aa8.17□□□□□ -1.1
CHD3-210ENST00000479080 A0A1B0GWB2 263 aa8.17□□□□□ -1.1
CHD3-210ENST00000479080 GAGE10A6NGK3 116 aa8.17□□□□□ -1.1
CHD3-210ENST00000479080 PCP4L1A6NKN8 68 aa8.17□□□□□ -1.1
CHD3-210ENST00000479080 RPL24P83731 157 aaKnown RBP8.17□□□□□ -1.1
CHD3-210ENST00000479080 K7ERJ3 54 aa8.16□□□□□ -1.1
CHD3-210ENST00000479080 M0R378 163 aa8.16□□□□□ -1.1
CHD3-210ENST00000479080 MRPL55Q7Z7F7 128 aaKnown RBP8.16□□□□□ -1.1
CHD3-210ENST00000479080 TRBV10-3A0A0K0K1G6 114 aa8.15□□□□□ -1.1
CHD3-210ENST00000479080 IGLV6-57P01721 117 aa8.15□□□□□ -1.1
CHD3-210ENST00000479080 NKAPP1Q8N9T2 125 aa8.15□□□□□ -1.1
CHD3-210ENST00000479080 COPS9Q8WXC6 57 aa8.15□□□□□ -1.1
CHD3-210ENST00000479080 DPH3Q96FX2 82 aa8.15□□□□□ -1.1
CHD3-210ENST00000479080 VPS13BQ7Z7G8 4022 aa8.14□□□□□ -1.11
CHD3-210ENST00000479080 IGLV1-50A0A075B6I6 118 aa8.14□□□□□ -1.11
CHD3-210ENST00000479080 A0A0B4J2C4 111 aa8.14□□□□□ -1.11
CHD3-210ENST00000479080 RPL37AP8A6NKH3 93 aa8.14□□□□□ -1.11
CHD3-210ENST00000479080 NHP2Q9NX24 153 aaKnown RBP8.14□□□□□ -1.11
CHD3-210ENST00000479080 SNHG12Q9BXW3 62 aa8.13□□□□□ -1.11
CHD3-210ENST00000479080 M0R143 59 aa8.11□□□□□ -1.11
CHD3-210ENST00000479080 CDK2AP2O75956 126 aa8.11□□□□□ -1.11
CHD3-210ENST00000479080 RPL13AP40429 203 aaKnown RBP8.11□□□□□ -1.11
CHD3-210ENST00000479080 TMEM238LA0A1B0GVL6 79 aa8.1□□□□□ -1.11
CHD3-210ENST00000479080 A6NJY4 79 aa8.1□□□□□ -1.11
CHD3-210ENST00000479080 LBHQ53QV2 105 aaPredicted RBP8.1□□□□□ -1.11
CHD3-210ENST00000479080 KCNQ1DNQ9H478 68 aa8.1□□□□□ -1.11
CHD3-210ENST00000479080 PKHD1L1Q86WI1 4243 aa8.1□□□□□ -1.11
CHD3-210ENST00000479080 TRAV13-2A0A0B4J235 113 aa8.09□□□□□ -1.11
CHD3-210ENST00000479080 A6NDN8 102 aa8.09□□□□□ -1.11
CHD3-210ENST00000479080 KRTAP4-16G5E9R7 235 aaPredicted RBP8.09□□□□□ -1.11
CHD3-210ENST00000479080 SMR3BP02814 79 aaPredicted RBP8.09□□□□□ -1.11
CHD3-210ENST00000479080 SPRR1AP35321 89 aa8.09□□□□□ -1.11
CHD3-210ENST00000479080 KRTAP10-4P60372 401 aaPredicted RBP8.09□□□□□ -1.11
CHD3-210ENST00000479080 BATFQ16520 125 aa8.09□□□□□ -1.11
CHD3-210ENST00000479080 OR13C6PQ8NH95 151 aa8.09□□□□□ -1.11
CHD3-210ENST00000479080 S100A7L2Q5SY68 101 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms