RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 LINC00173Q6ZV60 143 aa5.63□□□□□ -1.51
CCM2-210ENST00000478169 CHCHD1Q96BP2 118 aaKnown RBP5.63□□□□□ -1.51
CCM2-210ENST00000478169 C14orf144Q96I85 54 aa5.63□□□□□ -1.51
CCM2-210ENST00000478169 ALKBH7Q9BT30 221 aaPredicted RBP5.63□□□□□ -1.51
CCM2-210ENST00000478169 CYSLTR1Q9Y271 337 aa5.63□□□□□ -1.51
CCM2-210ENST00000478169 LAMTOR2Q9Y2Q5 125 aa5.63□□□□□ -1.51
CCM2-210ENST00000478169 HSBP1L1C9JCN9 74 aa5.62□□□□□ -1.51
CCM2-210ENST00000478169 SERF1AO75920 110 aa5.62□□□□□ -1.51
CCM2-210ENST00000478169 SEC11AP67812 179 aa5.62□□□□□ -1.51
CCM2-210ENST00000478169 FAM229BQ4G0N7 80 aa5.62□□□□□ -1.51
CCM2-210ENST00000478169 KRTAP13-2Q52LG2 175 aa5.62□□□□□ -1.51
CCM2-210ENST00000478169 C2orf66Q6UXQ4 117 aa5.62□□□□□ -1.51
CCM2-210ENST00000478169 LINC00167Q96N53 147 aa5.62□□□□□ -1.51
CCM2-210ENST00000478169 MIEN1Q9BRT3 115 aa5.62□□□□□ -1.51
CCM2-210ENST00000478169 CDIP1Q9H305 208 aa5.62□□□□□ -1.51
CCM2-210ENST00000478169 CXCL5P42830 114 aa5.61□□□□□ -1.51
CCM2-210ENST00000478169 HERVK_113P63121 156 aa5.61□□□□□ -1.51
CCM2-210ENST00000478169 ZC2HC1BQ5TFG8 222 aa5.61□□□□□ -1.51
CCM2-210ENST00000478169 LINC00304Q8N9R0 145 aa5.61□□□□□ -1.51
CCM2-210ENST00000478169 RETNLBQ9BQ08 111 aa5.61□□□□□ -1.51
CCM2-210ENST00000478169 PRO1933Q9H354 126 aa5.61□□□□□ -1.51
CCM2-210ENST00000478169 MAP1LC3AQ9H492 121 aa5.61□□□□□ -1.51
CCM2-210ENST00000478169 ANAPC11Q9NYG5 84 aa5.61□□□□□ -1.51
CCM2-210ENST00000478169 UQCR10Q9UDW1 63 aa5.61□□□□□ -1.51
CCM2-210ENST00000478169 HSPB8Q9UJY1 196 aa5.61□□□□□ -1.51
CCM2-210ENST00000478169 LOC389332A0A1B0GUA5 103 aa5.6□□□□□ -1.51
CCM2-210ENST00000478169 IGIPA6NJ69 53 aa5.6□□□□□ -1.51
CCM2-210ENST00000478169 RPL37AP8A6NKH3 93 aa5.6□□□□□ -1.51
CCM2-210ENST00000478169 K7EMI3 77 aa5.6□□□□□ -1.51
CCM2-210ENST00000478169 KRTDAPP60985 99 aa5.6□□□□□ -1.51
CCM2-210ENST00000478169 ORMDL2Q53FV1 153 aa5.6□□□□□ -1.51
CCM2-210ENST00000478169 PAPPA-AS1Q5QFB9 102 aa5.6□□□□□ -1.51
CCM2-210ENST00000478169 KRTAP13-1Q8IUC0 172 aa5.6□□□□□ -1.51
CCM2-210ENST00000478169 Q8N8P6 123 aa5.6□□□□□ -1.51
CCM2-210ENST00000478169 CDKN2A-AS1Q9UH64 79 aa5.6□□□□□ -1.51
CCM2-210ENST00000478169 IGLV7-46A0A075B6I9 117 aa5.59□□□□□ -1.51
CCM2-210ENST00000478169 UBE2AP49459 152 aa5.59□□□□□ -1.51
CCM2-210ENST00000478169 MAP1LC3CQ9BXW4 147 aa5.59□□□□□ -1.51
CCM2-210ENST00000478169 GEMIN7Q9H840 131 aaKnown RBP5.59□□□□□ -1.51
CCM2-210ENST00000478169 IGLV5-37A0A075B6J1 123 aa5.58□□□□□ -1.52
CCM2-210ENST00000478169 IGKV2D-26A0A0A0MRZ7 120 aa5.58□□□□□ -1.52
CCM2-210ENST00000478169 COL5A1-AS1Q5SY13 56 aa5.58□□□□□ -1.52
CCM2-210ENST00000478169 PET117Q6UWS5 81 aa5.58□□□□□ -1.52
CCM2-210ENST00000478169 GAGE10A6NGK3 116 aa5.57□□□□□ -1.52
CCM2-210ENST00000478169 G0S2P27469 103 aa5.57□□□□□ -1.52
CCM2-210ENST00000478169 NKAPP1Q8N9T2 125 aa5.57□□□□□ -1.52
CCM2-210ENST00000478169 C18orf32Q8TCD1 76 aa5.57□□□□□ -1.52
CCM2-210ENST00000478169 TIMM17AQ99595 171 aa5.57□□□□□ -1.52
CCM2-210ENST00000478169 PMCHL2Q9BQD1 86 aa5.57□□□□□ -1.52
CCM2-210ENST00000478169 LEPROTL1O95214 131 aa5.56□□□□□ -1.52
CCM2-210ENST00000478169 LINC00614P0C842 121 aa5.56□□□□□ -1.52
CCM2-210ENST00000478169 SPATA45Q537H7 98 aa5.56□□□□□ -1.52
CCM2-210ENST00000478169 FA2HQ7L5A8 372 aa5.56□□□□□ -1.52
CCM2-210ENST00000478169 COX7B2Q8TF08 81 aa5.56□□□□□ -1.52
CCM2-210ENST00000478169 NXT2Q9NPJ8 142 aaKnown RBP5.56□□□□□ -1.52
CCM2-210ENST00000478169 PAM16Q9Y3D7 125 aa5.56□□□□□ -1.52
CCM2-210ENST00000478169 SMIM1B2RUZ4 78 aa5.55□□□□□ -1.52
CCM2-210ENST00000478169 EIF4EBP3O60516 100 aaPredicted RBP5.55□□□□□ -1.52
CCM2-210ENST00000478169 ANKRD39Q53RE8 183 aa5.55□□□□□ -1.52
CCM2-210ENST00000478169 PPDPFQ9H3Y8 114 aa5.55□□□□□ -1.52
CCM2-210ENST00000478169 TINCRA0A1B0GVN0 87 aa5.54□□□□□ -1.52
CCM2-210ENST00000478169 C3orf79P0CE67 100 aa5.54□□□□□ -1.52
CCM2-210ENST00000478169 KIAA1644Q3SXP7 199 aa5.54□□□□□ -1.52
CCM2-210ENST00000478169 TOMM6Q96B49 74 aa5.54□□□□□ -1.52
CCM2-210ENST00000478169 IGKV2-28A0A075B6P5 120 aa5.53□□□□□ -1.52
CCM2-210ENST00000478169 IGLV5-45A0A087WSX0 123 aa5.53□□□□□ -1.52
CCM2-210ENST00000478169 IGKV2D-28P01615 120 aa5.53□□□□□ -1.52
CCM2-210ENST00000478169 LCE3BQ5TA77 95 aa5.53□□□□□ -1.52
CCM2-210ENST00000478169 SPAG11AQ6PDA7 123 aa5.53□□□□□ -1.52
CCM2-210ENST00000478169 ERASQ7Z444 233 aa5.53□□□□□ -1.52
CCM2-210ENST00000478169 A0A1B0GV90 55 aa5.52□□□□□ -1.53
CCM2-210ENST00000478169 PRLHP81277 87 aa5.52□□□□□ -1.53
CCM2-210ENST00000478169 FP248Q71RG6 208 aaPredicted RBP5.52□□□□□ -1.53
CCM2-210ENST00000478169 FAM19A1Q7Z5A9 133 aa5.52□□□□□ -1.53
CCM2-210ENST00000478169 PLEKHB2Q96CS7 222 aa5.52□□□□□ -1.53
CCM2-210ENST00000478169 LINC01549A6NIU2 74 aa5.51□□□□□ -1.53
CCM2-210ENST00000478169 SYS1-DBNDD2H3BUS1 97 aa5.51□□□□□ -1.53
CCM2-210ENST00000478169 ATP5LO75964 103 aa5.51□□□□□ -1.53
CCM2-210ENST00000478169 IGLC3P0DOY3 106 aa5.51□□□□□ -1.53
CCM2-210ENST00000478169 LINC00310P59036 64 aa5.51□□□□□ -1.53
CCM2-210ENST00000478169 SCGB3A1Q96QR1 104 aa5.51□□□□□ -1.53
CCM2-210ENST00000478169 SNHG12Q9BXW3 62 aa5.51□□□□□ -1.53
CCM2-210ENST00000478169 TMEM126AQ9H061 195 aa5.51□□□□□ -1.53
CCM2-210ENST00000478169 LINC01547P58512 204 aaPredicted RBP5.5□□□□□ -1.53
CCM2-210ENST00000478169 SLC25A34Q6PIV7 304 aa5.5□□□□□ -1.53
CCM2-210ENST00000478169 FAM19A2Q8N3H0 131 aa5.5□□□□□ -1.53
CCM2-210ENST00000478169 C3orf22Q8N5N4 141 aa5.5□□□□□ -1.53
CCM2-210ENST00000478169 LINC00337Q8N6G1 96 aa5.5□□□□□ -1.53
CCM2-210ENST00000478169 TMEM238C9JI98 176 aa5.49□□□□□ -1.53
CCM2-210ENST00000478169 H3BRM9 83 aa5.49□□□□□ -1.53
CCM2-210ENST00000478169 M0R378 163 aa5.49□□□□□ -1.53
CCM2-210ENST00000478169 SPINK8P0C7L1 97 aa5.49□□□□□ -1.53
CCM2-210ENST00000478169 VPREB1P12018 145 aa5.49□□□□□ -1.53
CCM2-210ENST00000478169 PFN2P35080 140 aa5.49□□□□□ -1.53
CCM2-210ENST00000478169 RPL24P83731 157 aaKnown RBP5.49□□□□□ -1.53
CCM2-210ENST00000478169 BATFQ16520 125 aa5.49□□□□□ -1.53
CCM2-210ENST00000478169 ASB16-AS1Q495Z4 193 aa5.49□□□□□ -1.53
CCM2-210ENST00000478169 CST9LQ9H4G1 147 aa5.49□□□□□ -1.53
CCM2-210ENST00000478169 FSIP2Q5CZC0 6907 aa5.48□□□□□ -1.53
CCM2-210ENST00000478169 DLEU1O43261 78 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms