RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 DAND5Q8N907 189 aa12.51□□□□□ -0.41
ACTB-210ENST00000477812 VAMP8Q9BV40 100 aa12.51□□□□□ -0.41
ACTB-210ENST00000477812 PLA2G2DQ9UNK4 145 aa12.51□□□□□ -0.41
ACTB-210ENST00000477812 FAM19A5Q7Z5A7 132 aaPredicted RBP12.5□□□□□ -0.41
ACTB-210ENST00000477812 Q8NDZ9 215 aa12.5□□□□□ -0.41
ACTB-210ENST00000477812 PAM16Q9Y3D7 125 aa12.5□□□□□ -0.41
ACTB-210ENST00000477812 LOC107984156A0A0G2JMH3 177 aa12.48□□□□□ -0.41
ACTB-210ENST00000477812 SMR3BP02814 79 aaPredicted RBP12.48□□□□□ -0.41
ACTB-210ENST00000477812 S100A12P80511 92 aa12.48□□□□□ -0.41
ACTB-210ENST00000477812 SPATA45Q537H7 98 aa12.48□□□□□ -0.41
ACTB-210ENST00000477812 ARL17AQ8IVW1 177 aa12.48□□□□□ -0.41
ACTB-210ENST00000477812 TP73-AS1Q9UF72 201 aa12.48□□□□□ -0.41
ACTB-210ENST00000477812 IGLV5-37A0A075B6J1 123 aa12.47□□□□□ -0.41
ACTB-210ENST00000477812 COX8AP10176 69 aa12.47□□□□□ -0.41
ACTB-210ENST00000477812 BOD1L2Q8IYS8 172 aa12.47□□□□□ -0.41
ACTB-210ENST00000477812 M0QXV9 152 aa12.46□□□□□ -0.41
ACTB-210ENST00000477812 EIF4EBP3O60516 100 aaPredicted RBP12.46□□□□□ -0.41
ACTB-210ENST00000477812 VPREB1P12018 145 aa12.46□□□□□ -0.41
ACTB-210ENST00000477812 SCGB1D4Q6XE38 83 aa12.46□□□□□ -0.41
ACTB-210ENST00000477812 LINC00518Q8N0U6 118 aa12.46□□□□□ -0.41
ACTB-210ENST00000477812 LINC00528Q8N1L1 170 aa12.46□□□□□ -0.41
ACTB-210ENST00000477812 C12orf57Q99622 126 aa12.46□□□□□ -0.41
ACTB-210ENST00000477812 SOSTDC1Q6X4U4 206 aa12.45□□□□□ -0.42
ACTB-210ENST00000477812 PHF5AQ7RTV0 110 aaKnown RBP12.45□□□□□ -0.42
ACTB-210ENST00000477812 DLEU1O43261 78 aa12.44□□□□□ -0.42
ACTB-210ENST00000477812 Q8N1X5 172 aa12.44□□□□□ -0.42
ACTB-210ENST00000477812 C22orf24Q9Y442 160 aa12.44□□□□□ -0.42
ACTB-210ENST00000477812 TMEM238C9JI98 176 aa12.42□□□□□ -0.42
ACTB-210ENST00000477812 KRTAP11-1Q8IUC1 163 aa12.42□□□□□ -0.42
ACTB-210ENST00000477812 C14orf144Q96I85 54 aa12.42□□□□□ -0.42
ACTB-210ENST00000477812 SPANXDQ9BXN6 97 aa12.42□□□□□ -0.42
ACTB-210ENST00000477812 SPANXCQ9NY87 97 aa12.42□□□□□ -0.42
ACTB-210ENST00000477812 VPS13BQ7Z7G8 4022 aa12.42□□□□□ -0.42
ACTB-210ENST00000477812 KRTAP10-4P60372 401 aaPredicted RBP12.4□□□□□ -0.42
ACTB-210ENST00000477812 RPL24P83731 157 aaKnown RBP12.4□□□□□ -0.42
ACTB-210ENST00000477812 MRPL55Q7Z7F7 128 aaKnown RBP12.4□□□□□ -0.42
ACTB-210ENST00000477812 LINC00308Q8TCZ7 52 aa12.4□□□□□ -0.42
ACTB-210ENST00000477812 NPC2P61916 151 aa12.39□□□□□ -0.43
ACTB-210ENST00000477812 C7orf33Q8WU49 177 aa12.39□□□□□ -0.43
ACTB-210ENST00000477812 Q5VSD8 79 aa12.38□□□□□ -0.43
ACTB-210ENST00000477812 PRR3P79522 188 aaKnown RBP12.37□□□□□ -0.43
ACTB-210ENST00000477812 Q6ZVH6 145 aa12.37□□□□□ -0.43
ACTB-210ENST00000477812 NKAPP1Q8N9T2 125 aa12.37□□□□□ -0.43
ACTB-210ENST00000477812 MIEN1Q9BRT3 115 aa12.37□□□□□ -0.43
ACTB-210ENST00000477812 PPDPFQ9H3Y8 114 aa12.37□□□□□ -0.43
ACTB-210ENST00000477812 SPANXB1Q9NS25 103 aaPredicted RBP12.37□□□□□ -0.43
ACTB-210ENST00000477812 NDUFC2O95298 119 aa12.36□□□□□ -0.43
ACTB-210ENST00000477812 LBHQ53QV2 105 aaPredicted RBP12.36□□□□□ -0.43
ACTB-210ENST00000477812 SLC25A34Q6PIV7 304 aa12.36□□□□□ -0.43
ACTB-210ENST00000477812 LINC00167Q96N53 147 aa12.36□□□□□ -0.43
ACTB-210ENST00000477812 FAM229AH3BQW9 127 aa12.35□□□□□ -0.43
ACTB-210ENST00000477812 C2orf91Q6ZV80 131 aa12.35□□□□□ -0.43
ACTB-210ENST00000477812 GAGE10A6NGK3 116 aa12.34□□□□□ -0.43
ACTB-210ENST00000477812 IFITM1P13164 125 aa12.34□□□□□ -0.43
ACTB-210ENST00000477812 RPL37AP61513 92 aaKnown RBP12.34□□□□□ -0.43
ACTB-210ENST00000477812 KRTAP4-5Q9BYR2 181 aa12.34□□□□□ -0.43
ACTB-210ENST00000477812 NCR3O14931 201 aa12.33□□□□□ -0.44
ACTB-210ENST00000477812 HIGD1BQ9P298 99 aa12.33□□□□□ -0.44
ACTB-210ENST00000477812 PSORS1C2Q9UIG4 136 aa12.33□□□□□ -0.44
ACTB-210ENST00000477812 M0R378 163 aa12.32□□□□□ -0.44
ACTB-210ENST00000477812 UBE2BP63146 152 aa12.32□□□□□ -0.44
ACTB-210ENST00000477812 SRRM2Q9UQ35 2752 aaKnown RBP12.31□□□□□ -0.44
ACTB-210ENST00000477812 TRBV10-2A0A0K0K1G8 114 aa12.31□□□□□ -0.44
ACTB-210ENST00000477812 RPL37AP8A6NKH3 93 aa12.31□□□□□ -0.44
ACTB-210ENST00000477812 PLA2G1BP04054 148 aaKnown RBP12.31□□□□□ -0.44
ACTB-210ENST00000477812 MUSTN1Q8IVN3 82 aa12.31□□□□□ -0.44
ACTB-210ENST00000477812 IGLV1-50A0A075B6I6 118 aa12.3□□□□□ -0.44
ACTB-210ENST00000477812 IGKV2-28A0A075B6P5 120 aa12.3□□□□□ -0.44
ACTB-210ENST00000477812 IGKV2D-28P01615 120 aa12.3□□□□□ -0.44
ACTB-210ENST00000477812 TSTD3H0UI37 97 aa12.29□□□□□ -0.44
ACTB-210ENST00000477812 SRSF9Q13242 221 aaKnown RBP eCLIP12.29□□□□□ -0.44
ACTB-210ENST00000477812 COPS9Q8WXC6 57 aa12.29□□□□□ -0.44
ACTB-210ENST00000477812 UQCR10Q9UDW1 63 aa12.26□□□□□ -0.45
ACTB-210ENST00000477812 TRBV10-3A0A0K0K1G6 114 aa12.25□□□□□ -0.45
ACTB-210ENST00000477812 IGLV6-57P01721 117 aa12.25□□□□□ -0.45
ACTB-210ENST00000477812 HNRNPA3P51991 378 aaKnown RBP12.25□□□□□ -0.45
ACTB-210ENST00000477812 HIST1H4GQ99525 98 aa12.25□□□□□ -0.45
ACTB-210ENST00000477812 PRO1933Q9H354 126 aa12.25□□□□□ -0.45
ACTB-210ENST00000477812 C1orf137Q5JT78 98 aa12.24□□□□□ -0.45
ACTB-210ENST00000477812 ABCA13Q86UQ4 5058 aa12.24□□□□□ -0.45
ACTB-210ENST00000477812 LINC00337Q8N6G1 96 aa12.23□□□□□ -0.45
ACTB-210ENST00000477812 KCNQ1DNQ9H478 68 aa12.23□□□□□ -0.45
ACTB-210ENST00000477812 DDTP30046 118 aa12.22□□□□□ -0.45
ACTB-210ENST00000477812 TMEM126AQ9H061 195 aa12.22□□□□□ -0.45
ACTB-210ENST00000477812 PKHD1L1Q86WI1 4243 aa12.21□□□□□ -0.45
ACTB-210ENST00000477812 A4D1N5 150 aa12.21□□□□□ -0.45
ACTB-210ENST00000477812 BCE1O60756 84 aa12.21□□□□□ -0.45
ACTB-210ENST00000477812 IGLV7-43P04211 117 aa12.21□□□□□ -0.45
ACTB-210ENST00000477812 PRYO14603 147 aa12.2□□□□□ -0.46
ACTB-210ENST00000477812 SPRR1AP35321 89 aa12.2□□□□□ -0.46
ACTB-210ENST00000477812 TAL2Q16559 108 aa12.2□□□□□ -0.46
ACTB-210ENST00000477812 REG3GQ6UW15 175 aa12.2□□□□□ -0.46
ACTB-210ENST00000477812 S100A7L2Q5SY68 101 aa12.19□□□□□ -0.46
ACTB-210ENST00000477812 KRTAP13-1Q8IUC0 172 aa12.18□□□□□ -0.46
ACTB-210ENST00000477812 KRTAP4-16G5E9R7 235 aaPredicted RBP12.17□□□□□ -0.46
ACTB-210ENST00000477812 CEND1Q8N111 149 aa12.16□□□□□ -0.46
ACTB-210ENST00000477812 HSD52Q0P140 79 aa12.15□□□□□ -0.46
ACTB-210ENST00000477812 TRAV23DV6A0A075B6W5 121 aa12.14□□□□□ -0.47
ACTB-210ENST00000477812 OR13C6PQ8NH95 151 aa12.14□□□□□ -0.47
ACTB-210ENST00000477812 FXYD2P54710 66 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms