RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 FAM218AQ96MZ4 157 aa4.31□□□□□ -1.72
BRCA1-214ENST00000477152 SCGB3A1Q96QR1 104 aa4.31□□□□□ -1.72
BRCA1-214ENST00000477152 XAGE1AQ9HD64 81 aa4.31□□□□□ -1.72
BRCA1-214ENST00000477152 IGIPA6NJ69 53 aa4.3□□□□□ -1.72
BRCA1-214ENST00000477152 FAM229BQ4G0N7 80 aa4.3□□□□□ -1.72
BRCA1-214ENST00000477152 ERASQ7Z444 233 aa4.3□□□□□ -1.72
BRCA1-214ENST00000477152 COX7B2Q8TF08 81 aa4.3□□□□□ -1.72
BRCA1-214ENST00000477152 TOMM6Q96B49 74 aa4.3□□□□□ -1.72
BRCA1-214ENST00000477152 IGKV2D-26A0A0A0MRZ7 120 aa4.29□□□□□ -1.72
BRCA1-214ENST00000477152 TINCRA0A1B0GVN0 87 aa4.29□□□□□ -1.72
BRCA1-214ENST00000477152 ATP5LO75964 103 aa4.29□□□□□ -1.72
BRCA1-214ENST00000477152 LINC00173Q6ZV60 143 aa4.29□□□□□ -1.72
BRCA1-214ENST00000477152 KRTAP7-1Q8IUC3 87 aa4.29□□□□□ -1.72
BRCA1-214ENST00000477152 CDKN2A-AS1Q9UH64 79 aa4.29□□□□□ -1.72
BRCA1-214ENST00000477152 RNF213Q63HN8 5207 aa4.29□□□□□ -1.72
BRCA1-214ENST00000477152 COX19Q49B96 90 aa4.29□□□□□ -1.72
BRCA1-214ENST00000477152 SFTA2Q6UW10 78 aa4.29□□□□□ -1.72
BRCA1-214ENST00000477152 LINC00167Q96N53 147 aa4.29□□□□□ -1.72
BRCA1-214ENST00000477152 TRAV9-1A0A075B6T8 112 aa4.28□□□□□ -1.72
BRCA1-214ENST00000477152 S100PP25815 95 aa4.28□□□□□ -1.72
BRCA1-214ENST00000477152 SMCO4Q9NRQ5 59 aa4.28□□□□□ -1.72
BRCA1-214ENST00000477152 RPL37AP8A6NKH3 93 aa4.27□□□□□ -1.73
BRCA1-214ENST00000477152 CFC1BP0CG36 223 aa4.27□□□□□ -1.73
BRCA1-214ENST00000477152 CFC1P0CG37 223 aa4.27□□□□□ -1.73
BRCA1-214ENST00000477152 LINC00304Q8N9R0 145 aa4.27□□□□□ -1.73
BRCA1-214ENST00000477152 GNB1LQ9BYB4 327 aa4.27□□□□□ -1.73
BRCA1-214ENST00000477152 COX17Q14061 63 aa4.27□□□□□ -1.73
BRCA1-214ENST00000477152 PMVKQ15126 192 aa4.27□□□□□ -1.73
BRCA1-214ENST00000477152 ZC2HC1BQ5TFG8 222 aa4.27□□□□□ -1.73
BRCA1-214ENST00000477152 RAB5BP61020 215 aa4.26□□□□□ -1.73
BRCA1-214ENST00000477152 SPAG11AQ6PDA7 123 aa4.26□□□□□ -1.73
BRCA1-214ENST00000477152 FA2HQ7L5A8 372 aa4.26□□□□□ -1.73
BRCA1-214ENST00000477152 A0A087X002 238 aa4.25□□□□□ -1.73
BRCA1-214ENST00000477152 NOTCH2NLQ7Z3S9 236 aa4.25□□□□□ -1.73
BRCA1-214ENST00000477152 FAM19A1Q7Z5A9 133 aa4.25□□□□□ -1.73
BRCA1-214ENST00000477152 CST9LQ9H4G1 147 aa4.25□□□□□ -1.73
BRCA1-214ENST00000477152 ZNF706Q9Y5V0 76 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-214ENST00000477152 SPINK8P0C7L1 97 aa4.24□□□□□ -1.73
BRCA1-214ENST00000477152 S100A12P80511 92 aa4.24□□□□□ -1.73
BRCA1-214ENST00000477152 LITAFQ99732 161 aa4.24□□□□□ -1.73
BRCA1-214ENST00000477152 NDUFA6P56556 154 aa4.23□□□□□ -1.73
BRCA1-214ENST00000477152 TPRXLQ17RH7 258 aa4.23□□□□□ -1.73
BRCA1-214ENST00000477152 ADAMTSL4-AS1Q5T5F5 129 aa4.23□□□□□ -1.73
BRCA1-214ENST00000477152 IGLV7-46A0A075B6I9 117 aa4.23□□□□□ -1.73
BRCA1-214ENST00000477152 IGKV2-28A0A075B6P5 120 aa4.23□□□□□ -1.73
BRCA1-214ENST00000477152 LINC01546A6NGU7 62 aa4.23□□□□□ -1.73
BRCA1-214ENST00000477152 ATP6V1G1O75348 118 aa4.23□□□□□ -1.73
BRCA1-214ENST00000477152 IGKV2D-28P01615 120 aa4.23□□□□□ -1.73
BRCA1-214ENST00000477152 PFN2P35080 140 aa4.23□□□□□ -1.73
BRCA1-214ENST00000477152 UQCC3Q6UW78 93 aa4.23□□□□□ -1.73
BRCA1-214ENST00000477152 CBLN2Q8IUK8 224 aa4.23□□□□□ -1.73
BRCA1-214ENST00000477152 ERG28Q9UKR5 140 aa4.23□□□□□ -1.73
BRCA1-214ENST00000477152 LINC00587B1AMM8 73 aa4.22□□□□□ -1.73
BRCA1-214ENST00000477152 FP248Q71RG6 208 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-214ENST00000477152 KRTAP13-1Q8IUC0 172 aa4.22□□□□□ -1.73
BRCA1-214ENST00000477152 LINC00337Q8N6G1 96 aa4.22□□□□□ -1.73
BRCA1-214ENST00000477152 TMEM126AQ9H061 195 aa4.22□□□□□ -1.73
BRCA1-214ENST00000477152 NDUFA12Q9UI09 145 aa4.22□□□□□ -1.73
BRCA1-214ENST00000477152 IGLC3P0DOY3 106 aa4.21□□□□□ -1.74
BRCA1-214ENST00000477152 FABP9Q0Z7S8 132 aa4.21□□□□□ -1.74
BRCA1-214ENST00000477152 SND1-IT1Q9HBX3 110 aa4.21□□□□□ -1.74
BRCA1-214ENST00000477152 LPAP08519 4548 aa4.2□□□□□ -1.74
BRCA1-214ENST00000477152 ADCYAP1P18509 176 aa4.2□□□□□ -1.74
BRCA1-214ENST00000477152 PRLHP81277 87 aa4.2□□□□□ -1.74
BRCA1-214ENST00000477152 KRTAP13-2Q52LG2 175 aa4.2□□□□□ -1.74
BRCA1-214ENST00000477152 SEC11CQ9BY50 192 aa4.2□□□□□ -1.74
BRCA1-214ENST00000477152 ANAPC11Q9NYG5 84 aa4.2□□□□□ -1.74
BRCA1-214ENST00000477152 A0A1B0GVG6 124 aa4.2□□□□□ -1.74
BRCA1-214ENST00000477152 LINC00158P58513 81 aa4.2□□□□□ -1.74
BRCA1-214ENST00000477152 CLLU1Q5K131 121 aa4.2□□□□□ -1.74
BRCA1-214ENST00000477152 RETNLBQ9BQ08 111 aa4.2□□□□□ -1.74
BRCA1-214ENST00000477152 HIGD2AQ9BW72 106 aa4.2□□□□□ -1.74
BRCA1-214ENST00000477152 PPDPFQ9H3Y8 114 aa4.2□□□□□ -1.74
BRCA1-214ENST00000477152 M0R378 163 aa4.19□□□□□ -1.74
BRCA1-214ENST00000477152 HBDP02042 147 aa4.19□□□□□ -1.74
BRCA1-214ENST00000477152 TMEM170BQ5T4T1 132 aa4.19□□□□□ -1.74
BRCA1-214ENST00000477152 FAM19A2Q8N3H0 131 aa4.19□□□□□ -1.74
BRCA1-214ENST00000477152 PLEKHB2Q96CS7 222 aa4.19□□□□□ -1.74
BRCA1-214ENST00000477152 TMEM218A2RU14 115 aa4.18□□□□□ -1.74
BRCA1-214ENST00000477152 LINC00614P0C842 121 aa4.18□□□□□ -1.74
BRCA1-214ENST00000477152 MAP1LC3CQ9BXW4 147 aa4.18□□□□□ -1.74
BRCA1-214ENST00000477152 TMEM238C9JI98 176 aa4.18□□□□□ -1.74
BRCA1-214ENST00000477152 SPINK1P00995 79 aa4.18□□□□□ -1.74
BRCA1-214ENST00000477152 ZNF22P17026 224 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-214ENST00000477152 ETDCA0A1B0GVM5 59 aa4.17□□□□□ -1.74
BRCA1-214ENST00000477152 RHEBQ15382 184 aa4.17□□□□□ -1.74
BRCA1-214ENST00000477152 Q6ZVQ6 151 aa4.17□□□□□ -1.74
BRCA1-214ENST00000477152 BAGE3Q86Y29 109 aa4.17□□□□□ -1.74
BRCA1-214ENST00000477152 ZNF625Q96I27 306 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-214ENST00000477152 SCO1O75880 301 aa4.16□□□□□ -1.74
BRCA1-214ENST00000477152 HERV-K104P63124 156 aa4.16□□□□□ -1.74
BRCA1-214ENST00000477152 MEIG1Q5JSS6 88 aa4.16□□□□□ -1.74
BRCA1-214ENST00000477152 SPRR4Q96PI1 79 aa4.16□□□□□ -1.74
BRCA1-214ENST00000477152 TRAPPC1Q9Y5R8 145 aa4.16□□□□□ -1.74
BRCA1-214ENST00000477152 RPS10P5Q9NQ39 176 aa4.16□□□□□ -1.74
BRCA1-214ENST00000477152 CHTOPQ9Y3Y2 248 aaKnown RBP4.16□□□□□ -1.74
BRCA1-214ENST00000477152 DAND5Q8N907 189 aa4.15□□□□□ -1.74
BRCA1-214ENST00000477152 CBY1Q9Y3M2 126 aa4.15□□□□□ -1.74
BRCA1-214ENST00000477152 C3orf22Q8N5N4 141 aa4.14□□□□□ -1.75
BRCA1-214ENST00000477152 MYMXA0A1B0GTQ4 84 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms