RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 NXT2Q9NPJ8 142 aaKnown RBP6.73□□□□□ -1.33
HDAC6-219ENST00000476625 IGLV5-45A0A087WSX0 123 aa6.72□□□□□ -1.33
HDAC6-219ENST00000476625 TINCRA0A1B0GVN0 87 aa6.72□□□□□ -1.33
HDAC6-219ENST00000476625 NPSP0C0P6 89 aa6.72□□□□□ -1.33
HDAC6-219ENST00000476625 SEC11AP67812 179 aa6.72□□□□□ -1.33
HDAC6-219ENST00000476625 FABP9Q0Z7S8 132 aa6.72□□□□□ -1.33
HDAC6-219ENST00000476625 CBLN2Q8IUK8 224 aa6.72□□□□□ -1.33
HDAC6-219ENST00000476625 LINC00337Q8N6G1 96 aa6.72□□□□□ -1.33
HDAC6-219ENST00000476625 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
HDAC6-219ENST00000476625 SPRR4Q96PI1 79 aa6.72□□□□□ -1.33
HDAC6-219ENST00000476625 SCGB3A1Q96QR1 104 aa6.72□□□□□ -1.33
HDAC6-219ENST00000476625 SND1-IT1Q9HBX3 110 aa6.72□□□□□ -1.33
HDAC6-219ENST00000476625 TRAPPC1Q9Y5R8 145 aa6.72□□□□□ -1.33
HDAC6-219ENST00000476625 Q8NBF4 154 aa6.71□□□□□ -1.34
HDAC6-219ENST00000476625 MRPL18Q9H0U6 180 aaKnown RBP6.71□□□□□ -1.34
HDAC6-219ENST00000476625 CST9LQ9H4G1 147 aa6.7□□□□□ -1.34
HDAC6-219ENST00000476625 KRTAP19-2Q3LHN2 52 aa6.69□□□□□ -1.34
HDAC6-219ENST00000476625 ERASQ7Z444 233 aa6.69□□□□□ -1.34
HDAC6-219ENST00000476625 ATP5LO75964 103 aa6.68□□□□□ -1.34
HDAC6-219ENST00000476625 PAPPA-AS1Q5QFB9 102 aa6.68□□□□□ -1.34
HDAC6-219ENST00000476625 FP248Q71RG6 208 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-219ENST00000476625 YPEL4Q96NS1 127 aa6.68□□□□□ -1.34
HDAC6-219ENST00000476625 ERG28Q9UKR5 140 aa6.68□□□□□ -1.34
HDAC6-219ENST00000476625 SPAG11AQ6PDA7 123 aa6.66□□□□□ -1.34
HDAC6-219ENST00000476625 FA2HQ7L5A8 372 aa6.66□□□□□ -1.34
HDAC6-219ENST00000476625 IGLV5-39A0A0G2JS06 123 aa6.65□□□□□ -1.34
HDAC6-219ENST00000476625 A0A0U1RRA0 63 aa6.65□□□□□ -1.34
HDAC6-219ENST00000476625 ZNF22P17026 224 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-219ENST00000476625 MT1HP80294 61 aa6.65□□□□□ -1.34
HDAC6-219ENST00000476625 PMVKQ15126 192 aa6.65□□□□□ -1.34
HDAC6-219ENST00000476625 LINC01546A6NGU7 62 aa6.64□□□□□ -1.35
HDAC6-219ENST00000476625 COLCA2A8K830 154 aa6.64□□□□□ -1.35
HDAC6-219ENST00000476625 LINC00614P0C842 121 aa6.64□□□□□ -1.35
HDAC6-219ENST00000476625 SEC61BP60468 96 aaKnown RBP6.64□□□□□ -1.35
HDAC6-219ENST00000476625 CTAG1AP78358 180 aa6.64□□□□□ -1.35
HDAC6-219ENST00000476625 ATP6V1G1O75348 118 aa6.63□□□□□ -1.35
HDAC6-219ENST00000476625 IGLC3P0DOY3 106 aa6.63□□□□□ -1.35
HDAC6-219ENST00000476625 SMCR5Q8TEV8 140 aa6.63□□□□□ -1.35
HDAC6-219ENST00000476625 CHCHD1Q96BP2 118 aaKnown RBP6.63□□□□□ -1.35
HDAC6-219ENST00000476625 NCR3O14931 201 aa6.62□□□□□ -1.35
HDAC6-219ENST00000476625 TRGC2P03986 189 aa6.62□□□□□ -1.35
HDAC6-219ENST00000476625 NDUFA6P56556 154 aa6.62□□□□□ -1.35
HDAC6-219ENST00000476625 RPL24P83731 157 aaKnown RBP6.62□□□□□ -1.35
HDAC6-219ENST00000476625 XP32Q5T750 250 aa6.62□□□□□ -1.35
HDAC6-219ENST00000476625 Q8N377 158 aa6.62□□□□□ -1.35
HDAC6-219ENST00000476625 C18orf32Q8TCD1 76 aa6.62□□□□□ -1.35
HDAC6-219ENST00000476625 A0A096LNJ9 63 aa6.61□□□□□ -1.35
HDAC6-219ENST00000476625 IGLV9-49A0A0B4J1Y8 123 aa6.61□□□□□ -1.35
HDAC6-219ENST00000476625 H3BRM9 83 aa6.61□□□□□ -1.35
HDAC6-219ENST00000476625 MOBPQ13875 183 aa6.61□□□□□ -1.35
HDAC6-219ENST00000476625 ERC2-IT1O76042 136 aa6.6□□□□□ -1.35
HDAC6-219ENST00000476625 GAGE2AQ6NT46 116 aa6.6□□□□□ -1.35
HDAC6-219ENST00000476625 BAGE3Q86Y29 109 aa6.6□□□□□ -1.35
HDAC6-219ENST00000476625 C11orf86A6NJI1 115 aa6.59□□□□□ -1.35
HDAC6-219ENST00000476625 LINC00158P58513 81 aa6.59□□□□□ -1.35
HDAC6-219ENST00000476625 PMCHL1Q16048 86 aa6.59□□□□□ -1.35
HDAC6-219ENST00000476625 KRTAP4-16G5E9R7 235 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-219ENST00000476625 SPINK1P00995 79 aa6.58□□□□□ -1.36
HDAC6-219ENST00000476625 HBDP02042 147 aa6.58□□□□□ -1.36
HDAC6-219ENST00000476625 URB1-AS1Q96HZ7 61 aa6.58□□□□□ -1.36
HDAC6-219ENST00000476625 ZNF706Q9Y5V0 76 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-219ENST00000476625 HSBP1O75506 76 aa6.57□□□□□ -1.36
HDAC6-219ENST00000476625 SPRR1AP35321 89 aa6.57□□□□□ -1.36
HDAC6-219ENST00000476625 COX17Q14061 63 aa6.57□□□□□ -1.36
HDAC6-219ENST00000476625 LINC00483Q53H64 154 aa6.57□□□□□ -1.36
HDAC6-219ENST00000476625 PRYO14603 147 aa6.56□□□□□ -1.36
HDAC6-219ENST00000476625 SMIM13P0DJ93 91 aa6.56□□□□□ -1.36
HDAC6-219ENST00000476625 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
HDAC6-219ENST00000476625 TMEM170BQ5T4T1 132 aa6.56□□□□□ -1.36
HDAC6-219ENST00000476625 TRBV10-3A0A0K0K1G6 114 aa6.55□□□□□ -1.36
HDAC6-219ENST00000476625 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-219ENST00000476625 PCOTHQ58A44 107 aa6.55□□□□□ -1.36
HDAC6-219ENST00000476625 BOD1L2Q8IYS8 172 aa6.55□□□□□ -1.36
HDAC6-219ENST00000476625 ETDCA0A1B0GVM5 59 aa6.54□□□□□ -1.36
HDAC6-219ENST00000476625 HSPB8Q9UJY1 196 aa6.54□□□□□ -1.36
HDAC6-219ENST00000476625 IGLV8-61A0A075B6I0 122 aa6.53□□□□□ -1.36
HDAC6-219ENST00000476625 C9orf92A6NGG3 77 aa6.53□□□□□ -1.36
HDAC6-219ENST00000476625 Q9BRP9 147 aa6.53□□□□□ -1.36
HDAC6-219ENST00000476625 KCNQ1DNQ9H478 68 aa6.53□□□□□ -1.36
HDAC6-219ENST00000476625 NDUFA12Q9UI09 145 aa6.53□□□□□ -1.36
HDAC6-219ENST00000476625 B5MCH6 92 aa6.52□□□□□ -1.37
HDAC6-219ENST00000476625 HIST1H2BKO60814 126 aa6.52□□□□□ -1.37
HDAC6-219ENST00000476625 HIST1H2BJP06899 126 aa6.52□□□□□ -1.37
HDAC6-219ENST00000476625 HIST1H2BOP23527 126 aa6.52□□□□□ -1.37
HDAC6-219ENST00000476625 HIST1H2BBP33778 126 aa6.52□□□□□ -1.37
HDAC6-219ENST00000476625 HIST1H2BDP58876 126 aa6.52□□□□□ -1.37
HDAC6-219ENST00000476625 HIST1H2BCP62807 126 aa6.52□□□□□ -1.37
HDAC6-219ENST00000476625 HIST2H2BEQ16778 126 aa6.52□□□□□ -1.37
HDAC6-219ENST00000476625 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-219ENST00000476625 MIR7-3HGQ8N6C7 128 aa6.52□□□□□ -1.37
HDAC6-219ENST00000476625 HIST1H2BHQ93079 126 aa6.52□□□□□ -1.37
HDAC6-219ENST00000476625 HIST1H2BNQ99877 126 aa6.52□□□□□ -1.37
HDAC6-219ENST00000476625 HIST1H2BMQ99879 126 aa6.52□□□□□ -1.37
HDAC6-219ENST00000476625 SLC25A20O43772 301 aa6.51□□□□□ -1.37
HDAC6-219ENST00000476625 SERF1AO75920 110 aa6.51□□□□□ -1.37
HDAC6-219ENST00000476625 LEPROTL1O95214 131 aa6.51□□□□□ -1.37
HDAC6-219ENST00000476625 COA6Q5JTJ3 125 aaKnown RBP6.51□□□□□ -1.37
HDAC6-219ENST00000476625 TRAV12-1A0A0B4J245 112 aa6.5□□□□□ -1.37
HDAC6-219ENST00000476625 C9orf153Q5TBE3 101 aa6.5□□□□□ -1.37
HDAC6-219ENST00000476625 IFI27L1Q96BM0 104 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms