RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 ZNF73O43830 326 aaPredicted RBP9.29□□□□□ -0.92
HDAC1-206ENST00000476391 C18orf65Q6ZTR6 163 aa9.29□□□□□ -0.92
HDAC1-206ENST00000476391 A8MUN3 132 aa9.27□□□□□ -0.92
HDAC1-206ENST00000476391 LINC00588Q9Y4M8 146 aa9.27□□□□□ -0.92
HDAC1-206ENST00000476391 A0A0J9YWU9 116 aa9.27□□□□□ -0.93
HDAC1-206ENST00000476391 ZNF702PQ9H963 129 aa9.26□□□□□ -0.93
HDAC1-206ENST00000476391 WNK1Q9H4A3 2382 aa9.26□□□□□ -0.93
HDAC1-206ENST00000476391 CHCHD10Q8WYQ3 142 aaPredicted RBP9.26□□□□□ -0.93
HDAC1-206ENST00000476391 COL12A1Q99715 3063 aa9.25□□□□□ -0.93
HDAC1-206ENST00000476391 C10orf25Q5T742 122 aa9.25□□□□□ -0.93
HDAC1-206ENST00000476391 Q5VV11 94 aa9.25□□□□□ -0.93
HDAC1-206ENST00000476391 RBM12B-AS1Q9P1G2 102 aa9.25□□□□□ -0.93
HDAC1-206ENST00000476391 A0A1B0GW54 56 aa9.25□□□□□ -0.93
HDAC1-206ENST00000476391 UBE2AP49459 152 aa9.25□□□□□ -0.93
HDAC1-206ENST00000476391 C4orf3Q8WVX3 66 aa9.25□□□□□ -0.93
HDAC1-206ENST00000476391 ETDCA0A1B0GVM5 59 aa9.24□□□□□ -0.93
HDAC1-206ENST00000476391 NDUFB1O75438 58 aa9.24□□□□□ -0.93
HDAC1-206ENST00000476391 KLK12Q9UKR0 248 aa9.24□□□□□ -0.93
HDAC1-206ENST00000476391 NOTCH3Q9UM47 2321 aa9.24□□□□□ -0.93
HDAC1-206ENST00000476391 NCOR2Q9Y618 2525 aa9.24□□□□□ -0.93
HDAC1-206ENST00000476391 UNQ6190/PRO20217Q6UXQ8 127 aa9.23□□□□□ -0.93
HDAC1-206ENST00000476391 C3orf84H3BNL1 204 aa9.23□□□□□ -0.93
HDAC1-206ENST00000476391 GIG44P09565 113 aaPredicted RBP9.23□□□□□ -0.93
HDAC1-206ENST00000476391 CHD8Q9HCK8 2581 aa9.23□□□□□ -0.93
HDAC1-206ENST00000476391 CSPG4Q6UVK1 2322 aa9.22□□□□□ -0.93
HDAC1-206ENST00000476391 B4DSR2 109 aa9.22□□□□□ -0.93
HDAC1-206ENST00000476391 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.22□□□□□ -0.93
HDAC1-206ENST00000476391 CRYBG3Q68DQ2 2970 aa9.22□□□□□ -0.93
HDAC1-206ENST00000476391 CR1P17927 2039 aa9.21□□□□□ -0.93
HDAC1-206ENST00000476391 SPAG11BQ08648 103 aa9.21□□□□□ -0.93
HDAC1-206ENST00000476391 A8MU10 97 aa9.21□□□□□ -0.94
HDAC1-206ENST00000476391 NDUFS5O43920 106 aa9.21□□□□□ -0.94
HDAC1-206ENST00000476391 GYPEP15421 78 aa9.21□□□□□ -0.94
HDAC1-206ENST00000476391 GVQW2A0A096LPI5 108 aaPredicted RBP9.2□□□□□ -0.94
HDAC1-206ENST00000476391 LIMD2Q9BT23 127 aa9.2□□□□□ -0.94
HDAC1-206ENST00000476391 NBASA2RRP1 2371 aa9.2□□□□□ -0.94
HDAC1-206ENST00000476391 CYSRT1A8MQ03 144 aa9.2□□□□□ -0.94
HDAC1-206ENST00000476391 M0R378 163 aa9.2□□□□□ -0.94
HDAC1-206ENST00000476391 REG3AQ06141 175 aa9.2□□□□□ -0.94
HDAC1-206ENST00000476391 LINC00528Q8N1L1 170 aa9.2□□□□□ -0.94
HDAC1-206ENST00000476391 CSNK1G2-AS1Q8NCQ2 148 aa9.2□□□□□ -0.94
HDAC1-206ENST00000476391 IGF2RP11717 2491 aa9.2□□□□□ -0.94
HDAC1-206ENST00000476391 IGLV10-54A0A075B6I4 117 aa9.19□□□□□ -0.94
HDAC1-206ENST00000476391 C16orf90A8MZG2 172 aa9.19□□□□□ -0.94
HDAC1-206ENST00000476391 ATP11AUNQ6ZP68 121 aa9.19□□□□□ -0.94
HDAC1-206ENST00000476391 MAP1AP78559 2803 aaPredicted RBP9.18□□□□□ -0.94
HDAC1-206ENST00000476391 CHKB-CPT1BH3BT56 60 aa9.17□□□□□ -0.94
HDAC1-206ENST00000476391 CMC4P56277 68 aaPredicted RBP9.17□□□□□ -0.94
HDAC1-206ENST00000476391 PHF5AQ7RTV0 110 aaKnown RBP9.17□□□□□ -0.94
HDAC1-206ENST00000476391 VPS13CQ709C8 3753 aa9.17□□□□□ -0.94
HDAC1-206ENST00000476391 IGLV5-48A0A075B6I7 105 aa9.16□□□□□ -0.94
HDAC1-206ENST00000476391 ANGP03950 147 aaKnown RBP9.16□□□□□ -0.94
HDAC1-206ENST00000476391 PRR4Q16378 134 aa9.16□□□□□ -0.94
HDAC1-206ENST00000476391 Q8N9P0 234 aaPredicted RBP9.15□□□□□ -0.94
HDAC1-206ENST00000476391 B9D2Q9BPU9 175 aa9.15□□□□□ -0.94
HDAC1-206ENST00000476391 KPRPQ5T749 579 aaPredicted RBP9.14□□□□□ -0.95
HDAC1-206ENST00000476391 Q6YL49 198 aa9.14□□□□□ -0.95
HDAC1-206ENST00000476391 CCL19Q99731 98 aa9.14□□□□□ -0.95
HDAC1-206ENST00000476391 XAGE1AQ9HD64 81 aa9.14□□□□□ -0.95
HDAC1-206ENST00000476391 HCG22E2RYF7 251 aa9.13□□□□□ -0.95
HDAC1-206ENST00000476391 ST20-AS1Q8NBB2 130 aa9.13□□□□□ -0.95
HDAC1-206ENST00000476391 DEFB130BP0DP73 79 aa9.12□□□□□ -0.95
HDAC1-206ENST00000476391 DEFB130AP0DP74 79 aa9.12□□□□□ -0.95
HDAC1-206ENST00000476391 VPREB1P12018 145 aa9.12□□□□□ -0.95
HDAC1-206ENST00000476391 PRO0255Q9UI72 69 aa9.12□□□□□ -0.95
HDAC1-206ENST00000476391 CSMD2Q7Z408 3487 aa9.12□□□□□ -0.95
HDAC1-206ENST00000476391 SPTSSBQ8NFR3 76 aa9.12□□□□□ -0.95
HDAC1-206ENST00000476391 C6orf48Q9UBA6 75 aa9.12□□□□□ -0.95
HDAC1-206ENST00000476391 A6NN06 94 aa9.11□□□□□ -0.95
HDAC1-206ENST00000476391 SPANXA2-OT1Q8N9U9 137 aa9.11□□□□□ -0.95
HDAC1-206ENST00000476391 DSCR10P59022 87 aa9.11□□□□□ -0.95
HDAC1-206ENST00000476391 CACNA1AO00555 2505 aa9.1□□□□□ -0.95
HDAC1-206ENST00000476391 Q75L30 129 aa9.1□□□□□ -0.95
HDAC1-206ENST00000476391 Q9BRP9 147 aa9.1□□□□□ -0.95
HDAC1-206ENST00000476391 HIVEP3Q5T1R4 2406 aa9.1□□□□□ -0.95
HDAC1-206ENST00000476391 A0A096LPF7 62 aa9.1□□□□□ -0.95
HDAC1-206ENST00000476391 LINC00208Q96KT6 92 aa9.1□□□□□ -0.95
HDAC1-206ENST00000476391 KCNQ1DNQ9H478 68 aa9.1□□□□□ -0.95
HDAC1-206ENST00000476391 MP68P56378 58 aa9.09□□□□□ -0.95
HDAC1-206ENST00000476391 PRR15LQ9BU68 103 aa9.09□□□□□ -0.95
HDAC1-206ENST00000476391 LCA10Q71F78 164 aa9.09□□□□□ -0.96
HDAC1-206ENST00000476391 Q8N377 158 aa9.09□□□□□ -0.96
HDAC1-206ENST00000476391 A0A1W2PNM2 257 aa9.08□□□□□ -0.96
HDAC1-206ENST00000476391 K7EQZ3 153 aa9.08□□□□□ -0.96
HDAC1-206ENST00000476391 ITPR1Q14643 2758 aa9.07□□□□□ -0.96
HDAC1-206ENST00000476391 SPG11Q96JI7 2443 aa9.06□□□□□ -0.96
HDAC1-206ENST00000476391 LOC101927531A0A1B0GV80 90 aa9.06□□□□□ -0.96
HDAC1-206ENST00000476391 PRB2P02812 416 aaPredicted RBP9.06□□□□□ -0.96
HDAC1-206ENST00000476391 Q8NBF4 154 aa9.06□□□□□ -0.96
HDAC1-206ENST00000476391 NBPF19A0A087WUL8 3843 aa9.06□□□□□ -0.96
HDAC1-206ENST00000476391 SPRR4Q96PI1 79 aa9.06□□□□□ -0.96
HDAC1-206ENST00000476391 DSCR9P59020 149 aa9.05□□□□□ -0.96
HDAC1-206ENST00000476391 WFDC10AQ9H1F0 79 aa9.05□□□□□ -0.96
HDAC1-206ENST00000476391 APOC4P55056 127 aa9.05□□□□□ -0.96
HDAC1-206ENST00000476391 C7orf65Q6ZTY9 151 aa9.05□□□□□ -0.96
HDAC1-206ENST00000476391 C19orf73Q9NVV2 129 aa9.05□□□□□ -0.96
HDAC1-206ENST00000476391 A6NED7 52 aa9.04□□□□□ -0.96
HDAC1-206ENST00000476391 ATRXP46100 2492 aa9.04□□□□□ -0.96
HDAC1-206ENST00000476391 DEFB105AQ8NG35 78 aa9.04□□□□□ -0.96
HDAC1-206ENST00000476391 ACACBO00763 2458 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms