RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 LYRM9A8MSI8 78 aa8.5□□□□□ -1.05
RNF220-211ENST00000474956 WFDC9Q8NEX5 89 aa8.5□□□□□ -1.05
RNF220-211ENST00000474956 CCKP06307 115 aa8.49□□□□□ -1.05
RNF220-211ENST00000474956 LINC01561Q8N1V8 128 aa8.49□□□□□ -1.05
RNF220-211ENST00000474956 MGAM2Q2M2H8 2515 aa8.49□□□□□ -1.05
RNF220-211ENST00000474956 ANGP03950 147 aaKnown RBP8.49□□□□□ -1.05
RNF220-211ENST00000474956 LINC00167Q96N53 147 aa8.49□□□□□ -1.05
RNF220-211ENST00000474956 hADV29S1A0JD25 119 aa8.49□□□□□ -1.05
RNF220-211ENST00000474956 JMJD7-PLA2G4BH0Y9G9 81 aa8.49□□□□□ -1.05
RNF220-211ENST00000474956 SERP2Q8N6R1 65 aa8.49□□□□□ -1.05
RNF220-211ENST00000474956 A0A1B0GUV1 79 aa8.48□□□□□ -1.05
RNF220-211ENST00000474956 C9orf116Q5BN46 136 aaPredicted RBP8.48□□□□□ -1.05
RNF220-211ENST00000474956 PRB2P02812 416 aaPredicted RBP8.48□□□□□ -1.05
RNF220-211ENST00000474956 S100A7L2Q5SY68 101 aa8.48□□□□□ -1.05
RNF220-211ENST00000474956 DNAH3Q8TD57 4116 aa8.48□□□□□ -1.05
RNF220-211ENST00000474956 J3KT08 172 aa8.47□□□□□ -1.05
RNF220-211ENST00000474956 A0A087WVE0 104 aa8.47□□□□□ -1.05
RNF220-211ENST00000474956 PRR3P79522 188 aaKnown RBP8.47□□□□□ -1.05
RNF220-211ENST00000474956 LYSTQ99698 3801 aa8.47□□□□□ -1.05
RNF220-211ENST00000474956 Q8N814 137 aa8.47□□□□□ -1.05
RNF220-211ENST00000474956 USP17L23D6RBM5 183 aa8.46□□□□□ -1.05
RNF220-211ENST00000474956 TMEM256-PLSCR3K7ERE1 68 aa8.46□□□□□ -1.05
RNF220-211ENST00000474956 NDUFC2O95298 119 aa8.46□□□□□ -1.06
RNF220-211ENST00000474956 NANOS2P60321 138 aaKnown RBP8.46□□□□□ -1.06
RNF220-211ENST00000474956 RPS28P62857 69 aaKnown RBP8.45□□□□□ -1.06
RNF220-211ENST00000474956 CHCHD10Q8WYQ3 142 aaPredicted RBP8.45□□□□□ -1.06
RNF220-211ENST00000474956 MIFP14174 115 aa8.45□□□□□ -1.06
RNF220-211ENST00000474956 REG3AQ06141 175 aa8.45□□□□□ -1.06
RNF220-211ENST00000474956 COX17Q14061 63 aa8.45□□□□□ -1.06
RNF220-211ENST00000474956 C6orf223Q8N319 242 aa8.45□□□□□ -1.06
RNF220-211ENST00000474956 LOC107984640A0A0U1RRK4 108 aa8.44□□□□□ -1.06
RNF220-211ENST00000474956 SPART-AS1P0CW21 52 aa8.44□□□□□ -1.06
RNF220-211ENST00000474956 ATP5EP2Q5VTU8 51 aa8.44□□□□□ -1.06
RNF220-211ENST00000474956 UPK3BQ9BT76 320 aa8.44□□□□□ -1.06
RNF220-211ENST00000474956 COL7A1Q02388 2944 aa8.44□□□□□ -1.06
RNF220-211ENST00000474956 TMEM258P61165 79 aa8.43□□□□□ -1.06
RNF220-211ENST00000474956 KLK12Q9UKR0 248 aa8.43□□□□□ -1.06
RNF220-211ENST00000474956 CYSTM1Q9H1C7 97 aa8.43□□□□□ -1.06
RNF220-211ENST00000474956 Q8NDZ9 215 aa8.42□□□□□ -1.06
RNF220-211ENST00000474956 C10orf25Q5T742 122 aa8.42□□□□□ -1.06
RNF220-211ENST00000474956 Q6ZTC4 211 aa8.42□□□□□ -1.06
RNF220-211ENST00000474956 KIAA0087Q14695 138 aa8.42□□□□□ -1.06
RNF220-211ENST00000474956 CD164L2Q6UWJ8 174 aa8.41□□□□□ -1.06
RNF220-211ENST00000474956 WIPF1O43516 503 aa8.41□□□□□ -1.06
RNF220-211ENST00000474956 LYPD5Q6UWN5 251 aa8.4□□□□□ -1.06
RNF220-211ENST00000474956 WFDC10BQ8IUB3 73 aa8.4□□□□□ -1.06
RNF220-211ENST00000474956 FAM19A5Q7Z5A7 132 aaPredicted RBP8.4□□□□□ -1.07
RNF220-211ENST00000474956 UBL5Q9BZL1 73 aa8.39□□□□□ -1.07
RNF220-211ENST00000474956 C6orf99Q4VX62 202 aa8.39□□□□□ -1.07
RNF220-211ENST00000474956 TRBV10-3A0A0K0K1G6 114 aa8.39□□□□□ -1.07
RNF220-211ENST00000474956 ENHOQ6UWT2 76 aa8.39□□□□□ -1.07
RNF220-211ENST00000474956 STAB2Q8WWQ8 2551 aa8.38□□□□□ -1.07
RNF220-211ENST00000474956 UNQ6190/PRO20217Q6UXQ8 127 aa8.38□□□□□ -1.07
RNF220-211ENST00000474956 TENM2Q9NT68 2774 aa8.38□□□□□ -1.07
RNF220-211ENST00000474956 HUWE1Q7Z6Z7 4374 aaKnown RBP8.38□□□□□ -1.07
RNF220-211ENST00000474956 A0A0J9YWU9 116 aa8.37□□□□□ -1.07
RNF220-211ENST00000474956 DPH3Q96FX2 82 aa8.37□□□□□ -1.07
RNF220-211ENST00000474956 GHRHP01286 108 aa8.37□□□□□ -1.07
RNF220-211ENST00000474956 LINC00575Q6W349 94 aa8.37□□□□□ -1.07
RNF220-211ENST00000474956 KPRPQ5T749 579 aaPredicted RBP8.37□□□□□ -1.07
RNF220-211ENST00000474956 LELP1Q5T871 98 aa8.37□□□□□ -1.07
RNF220-211ENST00000474956 FAM19A1Q7Z5A9 133 aa8.36□□□□□ -1.07
RNF220-211ENST00000474956 TRAV23DV6A0A075B6W5 121 aa8.36□□□□□ -1.07
RNF220-211ENST00000474956 RBM3P98179 157 aaKnown RBP8.35□□□□□ -1.07
RNF220-211ENST00000474956 MUC7Q8TAX7 377 aa8.35□□□□□ -1.07
RNF220-211ENST00000474956 ZNF561-AS1K7EIQ3 104 aa8.34□□□□□ -1.07
RNF220-211ENST00000474956 Q6ZQT0 140 aa8.34□□□□□ -1.07
RNF220-211ENST00000474956 CSMD3Q7Z407 3707 aa8.34□□□□□ -1.07
RNF220-211ENST00000474956 LOC110117498A0A087WWA1 95 aa8.33□□□□□ -1.08
RNF220-211ENST00000474956 SPAG11BQ08648 103 aa8.33□□□□□ -1.08
RNF220-211ENST00000474956 HIGD2BQ4VC39 106 aa8.33□□□□□ -1.08
RNF220-211ENST00000474956 MRAPQ8TCY5 172 aa8.33□□□□□ -1.08
RNF220-211ENST00000474956 NDUFC2-KCTD14E9PQ53 114 aa8.32□□□□□ -1.08
RNF220-211ENST00000474956 EGFEM1PQ0D2K5 195 aa8.32□□□□□ -1.08
RNF220-211ENST00000474956 ESRGQ1W209 222 aa8.32□□□□□ -1.08
RNF220-211ENST00000474956 C5orf47Q569G3 176 aa8.32□□□□□ -1.08
RNF220-211ENST00000474956 DSCR8Q96T75 97 aa8.32□□□□□ -1.08
RNF220-211ENST00000474956 LAMTOR3Q9UHA4 124 aa8.32□□□□□ -1.08
RNF220-211ENST00000474956 PRR34Q9NV39 138 aa8.32□□□□□ -1.08
RNF220-211ENST00000474956 DNAH10Q8IVF4 4471 aa8.31□□□□□ -1.08
RNF220-211ENST00000474956 H3BQ85 93 aa8.31□□□□□ -1.08
RNF220-211ENST00000474956 BCE1O60756 84 aa8.31□□□□□ -1.08
RNF220-211ENST00000474956 XAGE1AQ9HD64 81 aa8.3□□□□□ -1.08
RNF220-211ENST00000474956 IGLV6-57P01721 117 aa8.3□□□□□ -1.08
RNF220-211ENST00000474956 PDE6GP18545 87 aa8.29□□□□□ -1.08
RNF220-211ENST00000474956 C20orf197Q8N268 126 aa8.28□□□□□ -1.08
RNF220-211ENST00000474956 DEFB131BA0A096LNP1 70 aa8.28□□□□□ -1.08
RNF220-211ENST00000474956 LINC01547P58512 204 aaPredicted RBP8.28□□□□□ -1.08
RNF220-211ENST00000474956 Q6ZQY7 126 aa8.28□□□□□ -1.08
RNF220-211ENST00000474956 OXTP01178 125 aa8.28□□□□□ -1.08
RNF220-211ENST00000474956 C6orf48Q9UBA6 75 aa8.28□□□□□ -1.08
RNF220-211ENST00000474956 DNAH7Q8WXX0 4024 aa8.27□□□□□ -1.09
RNF220-211ENST00000474956 Q6ZVQ6 151 aa8.27□□□□□ -1.09
RNF220-211ENST00000474956 TRAV7A0A075B6U4 112 aa8.27□□□□□ -1.09
RNF220-211ENST00000474956 C11orf45Q8TAV5 145 aa8.27□□□□□ -1.09
RNF220-211ENST00000474956 HAMPP81172 84 aa8.26□□□□□ -1.09
RNF220-211ENST00000474956 M0R2N4 97 aa8.26□□□□□ -1.09
RNF220-211ENST00000474956 KRTAP26-1Q6PEX3 210 aa8.26□□□□□ -1.09
RNF220-211ENST00000474956 DNAH1Q9P2D7 4330 aa8.25□□□□□ -1.09
RNF220-211ENST00000474956 CXCL6P80162 114 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms