RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 CHCHD10Q8WYQ3 142 aaPredicted RBP4.05□□□□□ -1.76
ATPAF1-204ENST00000474020 C11orf68Q9H3H3 251 aaKnown RBP4.05□□□□□ -1.76
ATPAF1-204ENST00000474020 PKD1L1Q8TDX9 2849 aa4.04□□□□□ -1.76
ATPAF1-204ENST00000474020 FAM240AA0A1B0GVK7 77 aa4.04□□□□□ -1.76
ATPAF1-204ENST00000474020 H3BNG1 76 aa4.04□□□□□ -1.76
ATPAF1-204ENST00000474020 CLPSL2Q6UWE3 100 aa4.04□□□□□ -1.76
ATPAF1-204ENST00000474020 SOSTDC1Q6X4U4 206 aa4.04□□□□□ -1.76
ATPAF1-204ENST00000474020 ACANP16112 2415 aa4.04□□□□□ -1.76
ATPAF1-204ENST00000474020 BAALC-AS2P0C853 105 aa4.03□□□□□ -1.76
ATPAF1-204ENST00000474020 CCL18P55774 89 aa4.03□□□□□ -1.76
ATPAF1-204ENST00000474020 KLK5Q9Y337 293 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-204ENST00000474020 ZANQ9Y493 2812 aa4.02□□□□□ -1.77
ATPAF1-204ENST00000474020 TEX49A0A1B0GTD5 131 aa4.02□□□□□ -1.77
ATPAF1-204ENST00000474020 A0A1B0GX51 115 aa4.02□□□□□ -1.77
ATPAF1-204ENST00000474020 NDUFC2O95298 119 aa4.02□□□□□ -1.77
ATPAF1-204ENST00000474020 SPAG11BQ08648 103 aa4.02□□□□□ -1.77
ATPAF1-204ENST00000474020 GAGE2BQ13066 116 aa4.02□□□□□ -1.77
ATPAF1-204ENST00000474020 GAGE2EQ4V326 116 aa4.02□□□□□ -1.77
ATPAF1-204ENST00000474020 S100A7L2Q5SY68 101 aa4.02□□□□□ -1.77
ATPAF1-204ENST00000474020 TMEM126AQ9H061 195 aa4.02□□□□□ -1.77
ATPAF1-204ENST00000474020 GAGE2DQ9UEU5 116 aa4.02□□□□□ -1.77
ATPAF1-204ENST00000474020 CELA1Q9UNI1 258 aa4.02□□□□□ -1.77
ATPAF1-204ENST00000474020 NSD1Q96L73 2696 aaPredicted RBP4.01□□□□□ -1.77
ATPAF1-204ENST00000474020 IGLV10-54A0A075B6I4 117 aa4.01□□□□□ -1.77
ATPAF1-204ENST00000474020 H3BQ85 93 aa4.01□□□□□ -1.77
ATPAF1-204ENST00000474020 PRYO14603 147 aa4.01□□□□□ -1.77
ATPAF1-204ENST00000474020 NANOS2P60321 138 aaKnown RBP4.01□□□□□ -1.77
ATPAF1-204ENST00000474020 TTC32Q5I0X7 151 aa4.01□□□□□ -1.77
ATPAF1-204ENST00000474020 DEFB121Q5J5C9 76 aa4.01□□□□□ -1.77
ATPAF1-204ENST00000474020 SMIM11BQ8TCY0 68 aa4.01□□□□□ -1.77
ATPAF1-204ENST00000474020 ORMDL1Q9P0S3 153 aa4.01□□□□□ -1.77
ATPAF1-204ENST00000474020 KLK12Q9UKR0 248 aa4.01□□□□□ -1.77
ATPAF1-204ENST00000474020 MXRA5Q9NR99 2828 aa4□□□□□ -1.77
ATPAF1-204ENST00000474020 F8WDY8 70 aa4□□□□□ -1.77
ATPAF1-204ENST00000474020 XGP55808 180 aa4□□□□□ -1.77
ATPAF1-204ENST00000474020 LINC00337Q8N6G1 96 aa4□□□□□ -1.77
ATPAF1-204ENST00000474020 TGP01266 2768 aa3.99□□□□□ -1.77
ATPAF1-204ENST00000474020 NOTCH3Q9UM47 2321 aa3.99□□□□□ -1.77
ATPAF1-204ENST00000474020 IGKV2-28A0A075B6P5 120 aa3.99□□□□□ -1.77
ATPAF1-204ENST00000474020 IGKV2D-28P01615 120 aa3.99□□□□□ -1.77
ATPAF1-204ENST00000474020 MT-ATP8P03928 68 aa3.99□□□□□ -1.77
ATPAF1-204ENST00000474020 EGFEM1PQ0D2K5 195 aa3.99□□□□□ -1.77
ATPAF1-204ENST00000474020 KPRPQ5T749 579 aaPredicted RBP3.99□□□□□ -1.77
ATPAF1-204ENST00000474020 Q6Q795 121 aa3.99□□□□□ -1.77
ATPAF1-204ENST00000474020 LYPD5Q6UWN5 251 aa3.99□□□□□ -1.77
ATPAF1-204ENST00000474020 C15orf53Q8NAA6 179 aa3.99□□□□□ -1.77
ATPAF1-204ENST00000474020 ANAPC13Q9BS18 74 aa3.99□□□□□ -1.77
ATPAF1-204ENST00000474020 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
ATPAF1-204ENST00000474020 PRR34Q9NV39 138 aa3.99□□□□□ -1.77
ATPAF1-204ENST00000474020 VPS13CQ709C8 3753 aa3.98□□□□□ -1.77
ATPAF1-204ENST00000474020 CUBNO60494 3623 aa3.98□□□□□ -1.77
ATPAF1-204ENST00000474020 DEFB131BA0A096LNP1 70 aa3.98□□□□□ -1.77
ATPAF1-204ENST00000474020 GVQW2A0A096LPI5 108 aaPredicted RBP3.98□□□□□ -1.77
ATPAF1-204ENST00000474020 JMJD7-PLA2G4BH0Y9G9 81 aa3.98□□□□□ -1.77
ATPAF1-204ENST00000474020 LECT2O14960 151 aa3.98□□□□□ -1.77
ATPAF1-204ENST00000474020 KIAA0087Q14695 138 aa3.98□□□□□ -1.77
ATPAF1-204ENST00000474020 GAGE2AQ6NT46 116 aa3.98□□□□□ -1.77
ATPAF1-204ENST00000474020 C11orf45Q8TAV5 145 aa3.98□□□□□ -1.77
ATPAF1-204ENST00000474020 RMI2Q96E14 147 aa3.98□□□□□ -1.77
ATPAF1-204ENST00000474020 Q9HAA7 133 aa3.98□□□□□ -1.77
ATPAF1-204ENST00000474020 ZNF469Q96JG9 3925 aaPredicted RBP3.98□□□□□ -1.77
ATPAF1-204ENST00000474020 NBEAL2Q6ZNJ1 2754 aa3.97□□□□□ -1.77
ATPAF1-204ENST00000474020 A0A0J9YWU9 116 aa3.97□□□□□ -1.77
ATPAF1-204ENST00000474020 TMEM256-PLSCR3K7ERE1 68 aa3.97□□□□□ -1.77
ATPAF1-204ENST00000474020 NCR3O14931 201 aa3.97□□□□□ -1.77
ATPAF1-204ENST00000474020 KRTAP24-1Q3LI83 254 aa3.97□□□□□ -1.77
ATPAF1-204ENST00000474020 LINC00643Q86TS7 51 aa3.97□□□□□ -1.77
ATPAF1-204ENST00000474020 CAMK2N2Q96S95 79 aa3.97□□□□□ -1.77
ATPAF1-204ENST00000474020 IMUPQ9GZP8 106 aa3.97□□□□□ -1.77
ATPAF1-204ENST00000474020 A0A087WYN8 130 aa3.96□□□□□ -1.78
ATPAF1-204ENST00000474020 TRAV10A0A0B4J240 114 aa3.96□□□□□ -1.78
ATPAF1-204ENST00000474020 Q6ZTC4 211 aa3.96□□□□□ -1.78
ATPAF1-204ENST00000474020 C2orf48Q96LS8 159 aa3.96□□□□□ -1.78
ATPAF1-204ENST00000474020 FAM218AQ96MZ4 157 aa3.96□□□□□ -1.78
ATPAF1-204ENST00000474020 RETNQ9HD89 108 aa3.96□□□□□ -1.78
ATPAF1-204ENST00000474020 MEGF8Q7Z7M0 2845 aa3.95□□□□□ -1.78
ATPAF1-204ENST00000474020 LINC01556Q5JQF7 62 aa3.95□□□□□ -1.78
ATPAF1-204ENST00000474020 ENHOQ6UWT2 76 aa3.95□□□□□ -1.78
ATPAF1-204ENST00000474020 UNQ6190/PRO20217Q6UXQ8 127 aa3.95□□□□□ -1.78
ATPAF1-204ENST00000474020 DIRC1Q969H9 104 aa3.95□□□□□ -1.78
ATPAF1-204ENST00000474020 SVEP1Q4LDE5 3571 aa3.94□□□□□ -1.78
ATPAF1-204ENST00000474020 IGKV2D-24A0A075B6R9 120 aa3.94□□□□□ -1.78
ATPAF1-204ENST00000474020 TRBV7-7A0A0K0K1E9 115 aa3.94□□□□□ -1.78
ATPAF1-204ENST00000474020 hADV29S1A0JD25 119 aa3.94□□□□□ -1.78
ATPAF1-204ENST00000474020 C6orf99Q4VX62 202 aa3.94□□□□□ -1.78
ATPAF1-204ENST00000474020 WFDC10BQ8IUB3 73 aa3.94□□□□□ -1.78
ATPAF1-204ENST00000474020 Q8N814 137 aa3.94□□□□□ -1.78
ATPAF1-204ENST00000474020 TRAV23DV6A0A075B6W5 121 aa3.93□□□□□ -1.78
ATPAF1-204ENST00000474020 TRBV7-6A0A0J9YX20 115 aa3.93□□□□□ -1.78
ATPAF1-204ENST00000474020 PDE6GP18545 87 aa3.93□□□□□ -1.78
ATPAF1-204ENST00000474020 NDUFV3P56181 108 aaKnown RBP3.93□□□□□ -1.78
ATPAF1-204ENST00000474020 RPL18AQ02543 176 aaKnown RBP3.93□□□□□ -1.78
ATPAF1-204ENST00000474020 C9orf116Q5BN46 136 aaPredicted RBP3.93□□□□□ -1.78
ATPAF1-204ENST00000474020 ATP5EP2Q5VTU8 51 aa3.93□□□□□ -1.78
ATPAF1-204ENST00000474020 LINC00167Q96N53 147 aa3.93□□□□□ -1.78
ATPAF1-204ENST00000474020 C14orf132Q9NPU4 83 aa3.93□□□□□ -1.78
ATPAF1-204ENST00000474020 NDUFC2-KCTD14E9PQ53 114 aa3.92□□□□□ -1.78
ATPAF1-204ENST00000474020 M0R378 163 aa3.92□□□□□ -1.78
ATPAF1-204ENST00000474020 IGLV6-57P01721 117 aa3.92□□□□□ -1.78
ATPAF1-204ENST00000474020 COX7BP24311 80 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms