RNA–Protein interactions for RNA: ENST00000472677.1

TRABD-206, Transcript of TraB domain containing, humanhuman

TSL 1 (best)

Gene TRABD, Length 1,661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-206ENST00000472677 SPACA4Q8TDM5 124 aa13.62□□□□□ -0.23
TRABD-206ENST00000472677 HIST1H4GQ99525 98 aa13.62□□□□□ -0.23
TRABD-206ENST00000472677 SPANXB1Q9NS25 103 aaPredicted RBP13.62□□□□□ -0.23
TRABD-206ENST00000472677 COX17Q14061 63 aa13.6□□□□□ -0.23
TRABD-206ENST00000472677 CDK2AP2O75956 126 aa13.59□□□□□ -0.23
TRABD-206ENST00000472677 MIR7-3HGQ8N6C7 128 aa13.59□□□□□ -0.23
TRABD-206ENST00000472677 SPANXDQ9BXN6 97 aa13.59□□□□□ -0.23
TRABD-206ENST00000472677 SPANXCQ9NY87 97 aa13.59□□□□□ -0.23
TRABD-206ENST00000472677 XGP55808 180 aa13.59□□□□□ -0.23
TRABD-206ENST00000472677 SCXQ7RTU7 201 aa13.59□□□□□ -0.23
TRABD-206ENST00000472677 NPC2P61916 151 aa13.58□□□□□ -0.24
TRABD-206ENST00000472677 HSD52Q0P140 79 aa13.58□□□□□ -0.24
TRABD-206ENST00000472677 CIRBP-AS1Q8TBR5 109 aa13.58□□□□□ -0.24
TRABD-206ENST00000472677 XAGE1AQ9HD64 81 aa13.58□□□□□ -0.24
TRABD-206ENST00000472677 A0A087WYN8 130 aa13.57□□□□□ -0.24
TRABD-206ENST00000472677 TAL2Q16559 108 aa13.56□□□□□ -0.24
TRABD-206ENST00000472677 Q6ZVH6 145 aa13.56□□□□□ -0.24
TRABD-206ENST00000472677 C9orf129Q5T035 196 aaKnown RBP13.54□□□□□ -0.24
TRABD-206ENST00000472677 MUSTN1Q8IVN3 82 aa13.54□□□□□ -0.24
TRABD-206ENST00000472677 HINT1P49773 126 aaPredicted RBP13.53□□□□□ -0.24
TRABD-206ENST00000472677 CEND1Q8N111 149 aa13.53□□□□□ -0.24
TRABD-206ENST00000472677 LINC00308Q8TCZ7 52 aa13.53□□□□□ -0.24
TRABD-206ENST00000472677 DNAH8Q96JB1 4490 aa13.53□□□□□ -0.24
TRABD-206ENST00000472677 EIF4EBP3O60516 100 aaPredicted RBP13.52□□□□□ -0.25
TRABD-206ENST00000472677 SND1-IT1Q9HBX3 110 aa13.52□□□□□ -0.25
TRABD-206ENST00000472677 PLAC8Q9NZF1 115 aa13.52□□□□□ -0.25
TRABD-206ENST00000472677 APOBP04114 4563 aaKnown RBP13.51□□□□□ -0.25
TRABD-206ENST00000472677 A0A1W2PNN7 141 aa13.51□□□□□ -0.25
TRABD-206ENST00000472677 FAM168BA1KXE4 195 aa13.51□□□□□ -0.25
TRABD-206ENST00000472677 IFITM1P13164 125 aa13.51□□□□□ -0.25
TRABD-206ENST00000472677 SOSTDC1Q6X4U4 206 aa13.51□□□□□ -0.25
TRABD-206ENST00000472677 BIRC6Q9NR09 4857 aa13.51□□□□□ -0.25
TRABD-206ENST00000472677 FAM19A5Q7Z5A7 132 aaPredicted RBP13.5□□□□□ -0.25
TRABD-206ENST00000472677 M0R143 59 aa13.49□□□□□ -0.25
TRABD-206ENST00000472677 FXYD2P54710 66 aa13.49□□□□□ -0.25
TRABD-206ENST00000472677 BVES-AS1Q5T3Y7 98 aa13.49□□□□□ -0.25
TRABD-206ENST00000472677 COPS9Q8WXC6 57 aa13.49□□□□□ -0.25
TRABD-206ENST00000472677 SMR3BP02814 79 aaPredicted RBP13.48□□□□□ -0.25
TRABD-206ENST00000472677 RPL24P83731 157 aaKnown RBP13.47□□□□□ -0.25
TRABD-206ENST00000472677 BATFQ16520 125 aa13.47□□□□□ -0.25
TRABD-206ENST00000472677 KIAA1109Q2LD37 5005 aa13.46□□□□□ -0.25
TRABD-206ENST00000472677 A4D1N5 150 aa13.45□□□□□ -0.26
TRABD-206ENST00000472677 LOC107984156A0A0G2JMH3 177 aa13.44□□□□□ -0.26
TRABD-206ENST00000472677 SERTAD4-AS1Q5TG53 156 aa13.44□□□□□ -0.26
TRABD-206ENST00000472677 ARL17AQ8IVW1 177 aa13.44□□□□□ -0.26
TRABD-206ENST00000472677 TMEM238LA0A1B0GVL6 79 aa13.44□□□□□ -0.26
TRABD-206ENST00000472677 A6NJY4 79 aa13.44□□□□□ -0.26
TRABD-206ENST00000472677 PPDPFQ9H3Y8 114 aa13.44□□□□□ -0.26
TRABD-206ENST00000472677 KRTAP7-1Q8IUC3 87 aa13.43□□□□□ -0.26
TRABD-206ENST00000472677 SNHG12Q9BXW3 62 aa13.43□□□□□ -0.26
TRABD-206ENST00000472677 EPM2AB3EWF7 344 aa13.42□□□□□ -0.26
TRABD-206ENST00000472677 M0QXV9 152 aa13.42□□□□□ -0.26
TRABD-206ENST00000472677 PLA2G2DQ9UNK4 145 aa13.41□□□□□ -0.26
TRABD-206ENST00000472677 HSPG2P98160 4391 aa13.41□□□□□ -0.26
TRABD-206ENST00000472677 PHF5AQ7RTV0 110 aaKnown RBP13.4□□□□□ -0.26
TRABD-206ENST00000472677 C7orf33Q8WU49 177 aa13.4□□□□□ -0.26
TRABD-206ENST00000472677 NHP2Q9NX24 153 aaKnown RBP13.4□□□□□ -0.26
TRABD-206ENST00000472677 C22orf24Q9Y442 160 aa13.4□□□□□ -0.26
TRABD-206ENST00000472677 LINC00528Q8N1L1 170 aa13.4□□□□□ -0.26
TRABD-206ENST00000472677 NKAPP1Q8N9T2 125 aa13.4□□□□□ -0.26
TRABD-206ENST00000472677 Q8NDZ9 215 aa13.38□□□□□ -0.27
TRABD-206ENST00000472677 RYR1P21817 5038 aa13.38□□□□□ -0.27
TRABD-206ENST00000472677 CFC1BP0CG36 223 aa13.37□□□□□ -0.27
TRABD-206ENST00000472677 CFC1P0CG37 223 aa13.37□□□□□ -0.27
TRABD-206ENST00000472677 A6NDN8 102 aa13.37□□□□□ -0.27
TRABD-206ENST00000472677 VPREB1P12018 145 aa13.37□□□□□ -0.27
TRABD-206ENST00000472677 FAM229AH3BQW9 127 aa13.36□□□□□ -0.27
TRABD-206ENST00000472677 NDUFC2O95298 119 aa13.36□□□□□ -0.27
TRABD-206ENST00000472677 PRR3P79522 188 aaKnown RBP13.36□□□□□ -0.27
TRABD-206ENST00000472677 LBHQ53QV2 105 aaPredicted RBP13.36□□□□□ -0.27
TRABD-206ENST00000472677 MRPL55Q7Z7F7 128 aaKnown RBP13.36□□□□□ -0.27
TRABD-206ENST00000472677 K7ERJ3 54 aa13.35□□□□□ -0.27
TRABD-206ENST00000472677 UBE2BP63146 152 aa13.35□□□□□ -0.27
TRABD-206ENST00000472677 IGLV5-37A0A075B6J1 123 aa13.34□□□□□ -0.27
TRABD-206ENST00000472677 Q8N1X5 172 aa13.34□□□□□ -0.27
TRABD-206ENST00000472677 IGKV2-28A0A075B6P5 120 aa13.34□□□□□ -0.27
TRABD-206ENST00000472677 GAGE10A6NGK3 116 aa13.34□□□□□ -0.27
TRABD-206ENST00000472677 IGKV2D-28P01615 120 aa13.34□□□□□ -0.27
TRABD-206ENST00000472677 RAB37Q96AX2 223 aa13.34□□□□□ -0.27
TRABD-206ENST00000472677 A0A0B4J2C4 111 aa13.33□□□□□ -0.28
TRABD-206ENST00000472677 A0A1B0GWB2 263 aa13.33□□□□□ -0.28
TRABD-206ENST00000472677 NCR3O14931 201 aa13.33□□□□□ -0.28
TRABD-206ENST00000472677 LINC00167Q96N53 147 aa13.31□□□□□ -0.28
TRABD-206ENST00000472677 Q5VSD8 79 aa13.31□□□□□ -0.28
TRABD-206ENST00000472677 RPL37AP8A6NKH3 93 aa13.3□□□□□ -0.28
TRABD-206ENST00000472677 RPL37AP61513 92 aaKnown RBP13.3□□□□□ -0.28
TRABD-206ENST00000472677 LINC00337Q8N6G1 96 aa13.3□□□□□ -0.28
TRABD-206ENST00000472677 KRTAP17-1Q9BYP8 105 aa13.3□□□□□ -0.28
TRABD-206ENST00000472677 PRO1854Q9UHT4 67 aa13.3□□□□□ -0.28
TRABD-206ENST00000472677 TRAV13-2A0A0B4J235 113 aa13.28□□□□□ -0.28
TRABD-206ENST00000472677 M0R378 163 aa13.28□□□□□ -0.28
TRABD-206ENST00000472677 PLA2G1BP04054 148 aaKnown RBP13.28□□□□□ -0.28
TRABD-206ENST00000472677 COL5A1-AS1Q5SY13 56 aa13.28□□□□□ -0.28
TRABD-206ENST00000472677 OR13C6PQ8NH95 151 aa13.28□□□□□ -0.28
TRABD-206ENST00000472677 FAT1Q14517 4588 aa13.28□□□□□ -0.28
TRABD-206ENST00000472677 TRBV10-2A0A0K0K1G8 114 aa13.27□□□□□ -0.29
TRABD-206ENST00000472677 KRTAP11-1Q8IUC1 163 aa13.27□□□□□ -0.29
TRABD-206ENST00000472677 H7C2G1 150 aa13.26□□□□□ -0.29
TRABD-206ENST00000472677 RPL13AP40429 203 aaKnown RBP13.26□□□□□ -0.29
TRABD-206ENST00000472677 PSORS1C2Q9UIG4 136 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms