RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CHTOPQ9Y3Y2 248 aaKnown RBP5.34□□□□□ -1.55
USF1-204ENST00000472217 TRAV12-1A0A0B4J245 112 aa5.33□□□□□ -1.56
USF1-204ENST00000472217 TMEM238LA0A1B0GVL6 79 aa5.33□□□□□ -1.56
USF1-204ENST00000472217 UBE2AP49459 152 aa5.33□□□□□ -1.56
USF1-204ENST00000472217 SFTA2Q6UW10 78 aa5.33□□□□□ -1.56
USF1-204ENST00000472217 CBLN2Q8IUK8 224 aa5.33□□□□□ -1.56
USF1-204ENST00000472217 TMEM223A0PJW6 202 aa5.32□□□□□ -1.56
USF1-204ENST00000472217 TMEM238C9JI98 176 aa5.32□□□□□ -1.56
USF1-204ENST00000472217 CRYGAP11844 174 aa5.32□□□□□ -1.56
USF1-204ENST00000472217 PRLHP81277 87 aa5.32□□□□□ -1.56
USF1-204ENST00000472217 RPL24P83731 157 aaKnown RBP5.32□□□□□ -1.56
USF1-204ENST00000472217 IFI27L1Q96BM0 104 aa5.32□□□□□ -1.56
USF1-204ENST00000472217 TMEM126AQ9H061 195 aa5.32□□□□□ -1.56
USF1-204ENST00000472217 ANAPC11Q9NYG5 84 aa5.32□□□□□ -1.56
USF1-204ENST00000472217 PRR4Q16378 134 aa5.31□□□□□ -1.56
USF1-204ENST00000472217 KRTAP13-2Q52LG2 175 aa5.31□□□□□ -1.56
USF1-204ENST00000472217 FAM19A2Q8N3H0 131 aa5.31□□□□□ -1.56
USF1-204ENST00000472217 TYMSOSQ8TAI1 123 aa5.31□□□□□ -1.56
USF1-204ENST00000472217 A0A0U1RRA0 63 aa5.3□□□□□ -1.56
USF1-204ENST00000472217 M0R378 163 aa5.3□□□□□ -1.56
USF1-204ENST00000472217 HSBP1O75506 76 aa5.3□□□□□ -1.56
USF1-204ENST00000472217 TSPAN13O95857 204 aa5.3□□□□□ -1.56
USF1-204ENST00000472217 LINC00158P58513 81 aa5.3□□□□□ -1.56
USF1-204ENST00000472217 FAM19A1Q7Z5A9 133 aa5.3□□□□□ -1.56
USF1-204ENST00000472217 H0Y8G0 127 aa5.28□□□□□ -1.56
USF1-204ENST00000472217 TRGC2P03986 189 aa5.28□□□□□ -1.56
USF1-204ENST00000472217 SMIM13P0DJ93 91 aa5.28□□□□□ -1.56
USF1-204ENST00000472217 LINC00310P59036 64 aa5.28□□□□□ -1.56
USF1-204ENST00000472217 FAM229BQ4G0N7 80 aa5.28□□□□□ -1.56
USF1-204ENST00000472217 SERF1AO75920 110 aa5.27□□□□□ -1.57
USF1-204ENST00000472217 MEIG1Q5JSS6 88 aa5.27□□□□□ -1.57
USF1-204ENST00000472217 NDUFA12Q9UI09 145 aa5.27□□□□□ -1.57
USF1-204ENST00000472217 LPAP08519 4548 aa5.27□□□□□ -1.57
USF1-204ENST00000472217 IGKV2D-26A0A0A0MRZ7 120 aa5.26□□□□□ -1.57
USF1-204ENST00000472217 ATP6V1G1O75348 118 aa5.26□□□□□ -1.57
USF1-204ENST00000472217 LEPROTL1O95214 131 aa5.26□□□□□ -1.57
USF1-204ENST00000472217 HERV-K104P63124 156 aa5.26□□□□□ -1.57
USF1-204ENST00000472217 BOD1L2Q8IYS8 172 aa5.26□□□□□ -1.57
USF1-204ENST00000472217 MIR7-3HGQ8N6C7 128 aa5.26□□□□□ -1.57
USF1-204ENST00000472217 PLEKHB2Q96CS7 222 aa5.26□□□□□ -1.57
USF1-204ENST00000472217 HIGD2AQ9BW72 106 aa5.26□□□□□ -1.57
USF1-204ENST00000472217 NCR3O14931 201 aa5.25□□□□□ -1.57
USF1-204ENST00000472217 TSPEAR-AS2P59090 65 aa5.25□□□□□ -1.57
USF1-204ENST00000472217 LINC00304Q8N9R0 145 aa5.25□□□□□ -1.57
USF1-204ENST00000472217 MYMXA0A1B0GTQ4 84 aa5.24□□□□□ -1.57
USF1-204ENST00000472217 PRYO14603 147 aa5.24□□□□□ -1.57
USF1-204ENST00000472217 SLC7A5P1Q8MH63 180 aa5.24□□□□□ -1.57
USF1-204ENST00000472217 C3orf22Q8N5N4 141 aa5.24□□□□□ -1.57
USF1-204ENST00000472217 RETNLBQ9BQ08 111 aa5.24□□□□□ -1.57
USF1-204ENST00000472217 COLCA2A8K830 154 aa5.23□□□□□ -1.57
USF1-204ENST00000472217 LINC00587B1AMM8 73 aa5.23□□□□□ -1.57
USF1-204ENST00000472217 LEPROTO15243 131 aa5.23□□□□□ -1.57
USF1-204ENST00000472217 FABP4P15090 132 aa5.23□□□□□ -1.57
USF1-204ENST00000472217 PLNP26678 52 aa5.23□□□□□ -1.57
USF1-204ENST00000472217 DAND5Q8N907 189 aa5.23□□□□□ -1.57
USF1-204ENST00000472217 SPRR4Q96PI1 79 aa5.23□□□□□ -1.57
USF1-204ENST00000472217 PMCHL2Q9BQD1 86 aa5.23□□□□□ -1.57
USF1-204ENST00000472217 MAP1LC3CQ9BXW4 147 aa5.23□□□□□ -1.57
USF1-204ENST00000472217 TRBV10-3A0A0K0K1G6 114 aa5.22□□□□□ -1.57
USF1-204ENST00000472217 KRTAP4-16G5E9R7 235 aaPredicted RBP5.22□□□□□ -1.57
USF1-204ENST00000472217 J3QQQ9 107 aa5.22□□□□□ -1.57
USF1-204ENST00000472217 DPM2O94777 84 aa5.22□□□□□ -1.57
USF1-204ENST00000472217 SPRR1AP35321 89 aa5.22□□□□□ -1.57
USF1-204ENST00000472217 LINC00337Q8N6G1 96 aa5.22□□□□□ -1.57
USF1-204ENST00000472217 KCNQ1DNQ9H478 68 aa5.22□□□□□ -1.57
USF1-204ENST00000472217 HSPB8Q9UJY1 196 aa5.22□□□□□ -1.57
USF1-204ENST00000472217 LOC107984156A0A0G2JMH3 177 aa5.21□□□□□ -1.58
USF1-204ENST00000472217 IGKCP01834 107 aa5.21□□□□□ -1.58
USF1-204ENST00000472217 ARL17AQ8IVW1 177 aa5.21□□□□□ -1.58
USF1-204ENST00000472217 ZNF706Q9Y5V0 76 aaPredicted RBP5.21□□□□□ -1.58
USF1-204ENST00000472217 ETDCA0A1B0GVM5 59 aa5.2□□□□□ -1.58
USF1-204ENST00000472217 HERVK_113P61574 105 aa5.2□□□□□ -1.58
USF1-204ENST00000472217 LGALS3P17931 250 aaKnown RBP5.19□□□□□ -1.58
USF1-204ENST00000472217 DDTP30046 118 aa5.19□□□□□ -1.58
USF1-204ENST00000472217 NMUP48645 174 aa5.19□□□□□ -1.58
USF1-204ENST00000472217 CTAG1AP78358 180 aa5.19□□□□□ -1.58
USF1-204ENST00000472217 SMCR5Q8TEV8 140 aa5.19□□□□□ -1.58
USF1-204ENST00000472217 TRBV10-2A0A0K0K1G8 114 aa5.18□□□□□ -1.58
USF1-204ENST00000472217 B5MCH6 92 aa5.18□□□□□ -1.58
USF1-204ENST00000472217 S100A12P80511 92 aa5.18□□□□□ -1.58
USF1-204ENST00000472217 MIEN1Q9BRT3 115 aa5.18□□□□□ -1.58
USF1-204ENST00000472217 PPDPFQ9H3Y8 114 aa5.18□□□□□ -1.58
USF1-204ENST00000472217 SPANXB1Q9NS25 103 aaPredicted RBP5.18□□□□□ -1.58
USF1-204ENST00000472217 TPRXLQ17RH7 258 aa5.17□□□□□ -1.58
USF1-204ENST00000472217 SPAG11AQ6PDA7 123 aa5.17□□□□□ -1.58
USF1-204ENST00000472217 IGLV7-46A0A075B6I9 117 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 A0A0J9YXY3 114 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 E9PLD3 99 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 HIST1H2BKO60814 126 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 ERC2-IT1O76042 136 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 NDUFC2O95298 119 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 HIST1H2BJP06899 126 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 HIST1H2BOP23527 126 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 HIST1H2BBP33778 126 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 HIST1H2BDP58876 126 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 NPC2P61916 151 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 HIST1H2BCP62807 126 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 HIST2H2BEQ16778 126 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 LINC00483Q53H64 154 aa5.16□□□□□ -1.58
USF1-204ENST00000472217 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms