RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 CEND1Q8N111 149 aa12.46□□□□□ -0.41
CHMP2B-204ENST00000472024 DYNC1H1Q14204 4646 aaKnown RBP12.45□□□□□ -0.42
CHMP2B-204ENST00000472024 MUSTN1Q8IVN3 82 aa12.45□□□□□ -0.42
CHMP2B-204ENST00000472024 PLA2G2DQ9UNK4 145 aa12.44□□□□□ -0.42
CHMP2B-204ENST00000472024 RPL18AQ02543 176 aaKnown RBP12.43□□□□□ -0.42
CHMP2B-204ENST00000472024 C9orf129Q5T035 196 aaKnown RBP12.43□□□□□ -0.42
CHMP2B-204ENST00000472024 A0A096LNI7 61 aa12.42□□□□□ -0.42
CHMP2B-204ENST00000472024 NDUFC2O95298 119 aa12.42□□□□□ -0.42
CHMP2B-204ENST00000472024 M0R143 59 aa12.41□□□□□ -0.42
CHMP2B-204ENST00000472024 RPL24P83731 157 aaKnown RBP12.41□□□□□ -0.42
CHMP2B-204ENST00000472024 GAGE2EQ4V326 116 aa12.41□□□□□ -0.42
CHMP2B-204ENST00000472024 BVES-AS1Q5T3Y7 98 aa12.41□□□□□ -0.42
CHMP2B-204ENST00000472024 LRP1BQ9NZR2 4599 aa12.41□□□□□ -0.42
CHMP2B-204ENST00000472024 LINC00474Q9P2X8 69 aa12.41□□□□□ -0.42
CHMP2B-204ENST00000472024 GAGE2DQ9UEU5 116 aa12.41□□□□□ -0.42
CHMP2B-204ENST00000472024 FXYD2P54710 66 aa12.4□□□□□ -0.42
CHMP2B-204ENST00000472024 XAGE1AQ9HD64 81 aa12.4□□□□□ -0.42
CHMP2B-204ENST00000472024 PKHD1P08F94 4074 aa12.39□□□□□ -0.43
CHMP2B-204ENST00000472024 EPM2AB3EWF7 344 aa12.39□□□□□ -0.43
CHMP2B-204ENST00000472024 GAGE2BQ13066 116 aa12.39□□□□□ -0.43
CHMP2B-204ENST00000472024 IGLV5-37A0A075B6J1 123 aa12.38□□□□□ -0.43
CHMP2B-204ENST00000472024 A4D1N5 150 aa12.38□□□□□ -0.43
CHMP2B-204ENST00000472024 NPC2P61916 151 aa12.38□□□□□ -0.43
CHMP2B-204ENST00000472024 LINC01620Q4KN68 170 aa12.38□□□□□ -0.43
CHMP2B-204ENST00000472024 Q8NDZ9 215 aa12.38□□□□□ -0.43
CHMP2B-204ENST00000472024 TMEM238LA0A1B0GVL6 79 aa12.37□□□□□ -0.43
CHMP2B-204ENST00000472024 A0A1B0GWB2 263 aa12.37□□□□□ -0.43
CHMP2B-204ENST00000472024 A6NJY4 79 aa12.37□□□□□ -0.43
CHMP2B-204ENST00000472024 PCP4L1A6NKN8 68 aa12.37□□□□□ -0.43
CHMP2B-204ENST00000472024 VPREB1P12018 145 aa12.37□□□□□ -0.43
CHMP2B-204ENST00000472024 FUSP35637 526 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHMP2B-204ENST00000472024 SPACA4Q8TDM5 124 aa12.37□□□□□ -0.43
CHMP2B-204ENST00000472024 TRBV10-2A0A0K0K1G8 114 aa12.35□□□□□ -0.43
CHMP2B-204ENST00000472024 HINT1P49773 126 aaPredicted RBP12.35□□□□□ -0.43
CHMP2B-204ENST00000472024 Q6ZSA8 131 aa12.35□□□□□ -0.43
CHMP2B-204ENST00000472024 IGKV2-28A0A075B6P5 120 aa12.34□□□□□ -0.43
CHMP2B-204ENST00000472024 IGKV2D-28P01615 120 aa12.34□□□□□ -0.43
CHMP2B-204ENST00000472024 KRTAP7-1Q8IUC3 87 aa12.34□□□□□ -0.43
CHMP2B-204ENST00000472024 A0A0B4J2C4 111 aa12.33□□□□□ -0.44
CHMP2B-204ENST00000472024 PANO1I0J062 215 aa12.33□□□□□ -0.44
CHMP2B-204ENST00000472024 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.33□□□□□ -0.44
CHMP2B-204ENST00000472024 IGKV2-24A0A0C4DH68 120 aa12.32□□□□□ -0.44
CHMP2B-204ENST00000472024 CHTF8P0CG12 524 aa12.32□□□□□ -0.44
CHMP2B-204ENST00000472024 CFC1BP0CG36 223 aa12.32□□□□□ -0.44
CHMP2B-204ENST00000472024 CFC1P0CG37 223 aa12.32□□□□□ -0.44
CHMP2B-204ENST00000472024 SERTAD4-AS1Q5TG53 156 aa12.32□□□□□ -0.44
CHMP2B-204ENST00000472024 KRTAP10-1P60331 282 aa12.31□□□□□ -0.44
CHMP2B-204ENST00000472024 SNHG12Q9BXW3 62 aa12.31□□□□□ -0.44
CHMP2B-204ENST00000472024 A0A1W2PNN7 141 aa12.3□□□□□ -0.44
CHMP2B-204ENST00000472024 FAM168BA1KXE4 195 aa12.29□□□□□ -0.44
CHMP2B-204ENST00000472024 A6NDN8 102 aa12.28□□□□□ -0.44
CHMP2B-204ENST00000472024 LINC00337Q8N6G1 96 aa12.28□□□□□ -0.44
CHMP2B-204ENST00000472024 PLAC8Q9NZF1 115 aa12.28□□□□□ -0.44
CHMP2B-204ENST00000472024 TRAV13-2A0A0B4J235 113 aa12.27□□□□□ -0.45
CHMP2B-204ENST00000472024 M0R378 163 aa12.27□□□□□ -0.45
CHMP2B-204ENST00000472024 NHP2Q9NX24 153 aaKnown RBP12.27□□□□□ -0.45
CHMP2B-204ENST00000472024 PRR3P79522 188 aaKnown RBP12.26□□□□□ -0.45
CHMP2B-204ENST00000472024 C22orf24Q9Y442 160 aa12.26□□□□□ -0.45
CHMP2B-204ENST00000472024 APOBP04114 4563 aaKnown RBP12.25□□□□□ -0.45
CHMP2B-204ENST00000472024 IGLV6-57P01721 117 aa12.25□□□□□ -0.45
CHMP2B-204ENST00000472024 A0A087WYN8 130 aa12.24□□□□□ -0.45
CHMP2B-204ENST00000472024 FAM19A5Q7Z5A7 132 aaPredicted RBP12.24□□□□□ -0.45
CHMP2B-204ENST00000472024 NKAPP1Q8N9T2 125 aa12.24□□□□□ -0.45
CHMP2B-204ENST00000472024 FAM30AQ9NZY2 134 aa12.24□□□□□ -0.45
CHMP2B-204ENST00000472024 PRO1854Q9UHT4 67 aa12.24□□□□□ -0.45
CHMP2B-204ENST00000472024 NCR3O14931 201 aa12.23□□□□□ -0.45
CHMP2B-204ENST00000472024 MRPL55Q7Z7F7 128 aaKnown RBP12.23□□□□□ -0.45
CHMP2B-204ENST00000472024 C7orf33Q8WU49 177 aa12.23□□□□□ -0.45
CHMP2B-204ENST00000472024 RAB37Q96AX2 223 aa12.23□□□□□ -0.45
CHMP2B-204ENST00000472024 TMEM126AQ9H061 195 aa12.23□□□□□ -0.45
CHMP2B-204ENST00000472024 K7ERJ3 54 aa12.22□□□□□ -0.45
CHMP2B-204ENST00000472024 M0QXV9 152 aa12.22□□□□□ -0.45
CHMP2B-204ENST00000472024 BATFQ16520 125 aa12.21□□□□□ -0.45
CHMP2B-204ENST00000472024 LBHQ53QV2 105 aaPredicted RBP12.21□□□□□ -0.45
CHMP2B-204ENST00000472024 TRBV10-3A0A0K0K1G6 114 aa12.19□□□□□ -0.46
CHMP2B-204ENST00000472024 LINC00167Q96N53 147 aa12.19□□□□□ -0.46
CHMP2B-204ENST00000472024 IGLV1-50A0A075B6I6 118 aa12.18□□□□□ -0.46
CHMP2B-204ENST00000472024 RPL13AP40429 203 aaKnown RBP12.18□□□□□ -0.46
CHMP2B-204ENST00000472024 COL5A1-AS1Q5SY13 56 aa12.18□□□□□ -0.46
CHMP2B-204ENST00000472024 CBY1Q9Y3M2 126 aa12.18□□□□□ -0.46
CHMP2B-204ENST00000472024 S100A7L2Q5SY68 101 aa12.17□□□□□ -0.46
CHMP2B-204ENST00000472024 CIRBP-AS1Q8TBR5 109 aa12.17□□□□□ -0.46
CHMP2B-204ENST00000472024 KCNQ1DNQ9H478 68 aa12.17□□□□□ -0.46
CHMP2B-204ENST00000472024 SCXQ7RTU7 201 aa12.16□□□□□ -0.46
CHMP2B-204ENST00000472024 DPH3Q96FX2 82 aa12.16□□□□□ -0.46
CHMP2B-204ENST00000472024 TAX1BP3O14907 124 aa12.15□□□□□ -0.46
CHMP2B-204ENST00000472024 RPL28P46779 137 aaKnown RBP12.15□□□□□ -0.46
CHMP2B-204ENST00000472024 PHF5AQ7RTV0 110 aaKnown RBP12.15□□□□□ -0.46
CHMP2B-204ENST00000472024 OR13C6PQ8NH95 151 aa12.15□□□□□ -0.46
CHMP2B-204ENST00000472024 TSPAN13O95857 204 aa12.14□□□□□ -0.47
CHMP2B-204ENST00000472024 GAGE10A6NGK3 116 aa12.13□□□□□ -0.47
CHMP2B-204ENST00000472024 PRYO14603 147 aa12.13□□□□□ -0.47
CHMP2B-204ENST00000472024 SPRR1AP35321 89 aa12.13□□□□□ -0.47
CHMP2B-204ENST00000472024 SMIM11BQ8TCY0 68 aa12.13□□□□□ -0.47
CHMP2B-204ENST00000472024 TRAV23DV6A0A075B6W5 121 aa12.12□□□□□ -0.47
CHMP2B-204ENST00000472024 LCE2DQ5TA82 110 aaPredicted RBP12.12□□□□□ -0.47
CHMP2B-204ENST00000472024 TRBV7-6A0A0J9YX20 115 aa12.09□□□□□ -0.47
CHMP2B-204ENST00000472024 C9orf118A6NHY6 69 aa12.09□□□□□ -0.47
CHMP2B-204ENST00000472024 RPL37AP8A6NKH3 93 aa12.09□□□□□ -0.47
CHMP2B-204ENST00000472024 KRTAP4-16G5E9R7 235 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms