RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	KRTAP10-8	P60410	259 aa		8.96	□□□□□ -0.98
SSR4-208	ENST00000471880	IGLV5-37	A0A075B6J1	123 aa		8.95	□□□□□ -0.98
SSR4-208	ENST00000471880	SMIM13	P0DJ93	91 aa		8.95	□□□□□ -0.98
SSR4-208	ENST00000471880	PLN	P26678	52 aa		8.95	□□□□□ -0.98
SSR4-208	ENST00000471880	HERVK_113	P61574	105 aa		8.95	□□□□□ -0.98
SSR4-208	ENST00000471880	MAP1LC3C	Q9BXW4	147 aa		8.95	□□□□□ -0.98
SSR4-208	ENST00000471880	DPM2	O94777	84 aa		8.94	□□□□□ -0.98
SSR4-208	ENST00000471880	NDUFA12	Q9UI09	145 aa		8.94	□□□□□ -0.98
SSR4-208	ENST00000471880	MYMX	A0A1B0GTQ4	84 aa		8.93	□□□□□ -0.98
SSR4-208	ENST00000471880	IGKC	P01834	107 aa		8.93	□□□□□ -0.98
SSR4-208	ENST00000471880	VPREB1	P12018	145 aa		8.93	□□□□□ -0.98
SSR4-208	ENST00000471880	HIST1H2BK	O60814	126 aa		8.92	□□□□□ -0.98
SSR4-208	ENST00000471880	HIST1H2BJ	P06899	126 aa		8.92	□□□□□ -0.98
SSR4-208	ENST00000471880	HIST1H2BO	P23527	126 aa		8.92	□□□□□ -0.98
SSR4-208	ENST00000471880	HIST1H2BB	P33778	126 aa		8.92	□□□□□ -0.98
SSR4-208	ENST00000471880	HIST1H2BD	P58876	126 aa		8.92	□□□□□ -0.98
SSR4-208	ENST00000471880	HIST1H2BC	P62807	126 aa		8.92	□□□□□ -0.98
SSR4-208	ENST00000471880	HERV-K104	P63124	156 aa		8.92	□□□□□ -0.98
SSR4-208	ENST00000471880	HIST2H2BE	Q16778	126 aa		8.92	□□□□□ -0.98
SSR4-208	ENST00000471880	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	8.92	□□□□□ -0.98
SSR4-208	ENST00000471880	HIST1H2BH	Q93079	126 aa		8.92	□□□□□ -0.98
SSR4-208	ENST00000471880	HIST1H2BN	Q99877	126 aa		8.92	□□□□□ -0.98
SSR4-208	ENST00000471880	HIST1H2BM	Q99879	126 aa		8.92	□□□□□ -0.98
SSR4-208	ENST00000471880	LEPROT	O15243	131 aa		8.91	□□□□□ -0.98
SSR4-208	ENST00000471880	FAM19A1	Q7Z5A9	133 aa		8.91	□□□□□ -0.98
SSR4-208	ENST00000471880	MIR7-3HG	Q8N6C7	128 aa		8.91	□□□□□ -0.98
SSR4-208	ENST00000471880	PLEKHB2	Q96CS7	222 aa		8.91	□□□□□ -0.98
SSR4-208	ENST00000471880	LINC00587	B1AMM8	73 aa		8.9	□□□□□ -0.98
SSR4-208	ENST00000471880	TMEM238	C9JI98	176 aa		8.9	□□□□□ -0.98
SSR4-208	ENST00000471880	LGALS3	P17931	250 aa	Known RBP	8.9	□□□□□ -0.98
SSR4-208	ENST00000471880	TSPEAR-AS2	P59090	65 aa		8.9	□□□□□ -0.98
SSR4-208	ENST00000471880	BOD1L2	Q8IYS8	172 aa		8.9	□□□□□ -0.98
SSR4-208	ENST00000471880		Q8NDZ9	215 aa		8.9	□□□□□ -0.98
SSR4-208	ENST00000471880	IGLV1-50	A0A075B6I6	118 aa		8.89	□□□□□ -0.99
SSR4-208	ENST00000471880		J3QQQ9	107 aa		8.89	□□□□□ -0.99
SSR4-208	ENST00000471880	NCR3	O14931	201 aa		8.89	□□□□□ -0.99
SSR4-208	ENST00000471880	PRLH	P81277	87 aa		8.89	□□□□□ -0.99
SSR4-208	ENST00000471880	KRTAP1-4	P0C5Y4	121 aa		8.88	□□□□□ -0.99
SSR4-208	ENST00000471880	TMEM126A	Q9H061	195 aa		8.88	□□□□□ -0.99
SSR4-208	ENST00000471880	RPL13A	P40429	203 aa	Known RBP	8.87	□□□□□ -0.99
SSR4-208	ENST00000471880	DAND5	Q8N907	189 aa		8.87	□□□□□ -0.99
SSR4-208	ENST00000471880	UBR4	Q5T4S7	5183 aa		8.86	□□□□□ -0.99
SSR4-208	ENST00000471880		M0R378	163 aa		8.86	□□□□□ -0.99
SSR4-208	ENST00000471880	MIEN1	Q9BRT3	115 aa		8.86	□□□□□ -0.99
SSR4-208	ENST00000471880	LRP2	P98164	4655 aa		8.86	□□□□□ -0.99
SSR4-208	ENST00000471880	SYS1-DBNDD2	H3BUS1	97 aa		8.85	□□□□□ -0.99
SSR4-208	ENST00000471880	NMU	P48645	174 aa		8.84	□□□□□ -0.99
SSR4-208	ENST00000471880	ANAPC11	Q9NYG5	84 aa		8.84	□□□□□ -0.99
SSR4-208	ENST00000471880	NPC2	P61916	151 aa		8.83	□□□□□ -1
SSR4-208	ENST00000471880	HIGD2A	Q9BW72	106 aa		8.83	□□□□□ -1
SSR4-208	ENST00000471880	CRYGA	P11844	174 aa		8.82	□□□□□ -1
SSR4-208	ENST00000471880	KRTDAP	P60985	99 aa		8.82	□□□□□ -1
SSR4-208	ENST00000471880	S100A12	P80511	92 aa		8.82	□□□□□ -1
SSR4-208	ENST00000471880	KRTAP13-1	Q8IUC0	172 aa		8.81	□□□□□ -1
SSR4-208	ENST00000471880	TYMSOS	Q8TAI1	123 aa		8.81	□□□□□ -1
SSR4-208	ENST00000471880		A0A087X002	238 aa		8.8	□□□□□ -1
SSR4-208	ENST00000471880		E9PLD3	99 aa		8.8	□□□□□ -1
SSR4-208	ENST00000471880	PET117	Q6UWS5	81 aa		8.8	□□□□□ -1
SSR4-208	ENST00000471880	ETDC	A0A1B0GVM5	59 aa		8.79	□□□□□ -1
SSR4-208	ENST00000471880	PRY	O14603	147 aa		8.79	□□□□□ -1
SSR4-208	ENST00000471880	TSPAN13	O95857	204 aa		8.79	□□□□□ -1
SSR4-208	ENST00000471880	C3orf79	P0CE67	100 aa		8.79	□□□□□ -1
SSR4-208	ENST00000471880	IGKV2D-26	A0A0A0MRZ7	120 aa		8.78	□□□□□ -1
SSR4-208	ENST00000471880	TRBV10-3	A0A0K0K1G6	114 aa		8.78	□□□□□ -1
SSR4-208	ENST00000471880	LINC01545	Q5VT33	79 aa		8.78	□□□□□ -1
SSR4-208	ENST00000471880		A0A0J9YXY3	114 aa		8.77	□□□□□ -1.01
SSR4-208	ENST00000471880	C20orf202	A1L168	122 aa		8.77	□□□□□ -1.01
SSR4-208	ENST00000471880	S100A7L2	Q5SY68	101 aa		8.77	□□□□□ -1.01
SSR4-208	ENST00000471880	DDT	P30046	118 aa		8.76	□□□□□ -1.01
SSR4-208	ENST00000471880	ZNF815P	A8K554	130 aa		8.75	□□□□□ -1.01
SSR4-208	ENST00000471880	PRR4	Q16378	134 aa		8.75	□□□□□ -1.01
SSR4-208	ENST00000471880	SPANXB1	Q9NS25	103 aa	Predicted RBP	8.75	□□□□□ -1.01
SSR4-208	ENST00000471880	COA6	Q5JTJ3	125 aa	Known RBP	8.74	□□□□□ -1.01
SSR4-208	ENST00000471880	ADAMTSL4-AS1	Q5T5F5	129 aa		8.74	□□□□□ -1.01
SSR4-208	ENST00000471880	S100A1	P23297	94 aa		8.73	□□□□□ -1.01
SSR4-208	ENST00000471880	FAM229B	Q4G0N7	80 aa		8.73	□□□□□ -1.01
SSR4-208	ENST00000471880	ATOH7	Q8N100	152 aa		8.73	□□□□□ -1.01
SSR4-208	ENST00000471880	TTTY13	Q9BZ97	58 aa		8.73	□□□□□ -1.01
SSR4-208	ENST00000471880	KCNQ1DN	Q9H478	68 aa		8.73	□□□□□ -1.01
SSR4-208	ENST00000471880	TRBV10-2	A0A0K0K1G8	114 aa		8.72	□□□□□ -1.01
SSR4-208	ENST00000471880	KRTAP13-2	Q52LG2	175 aa		8.72	□□□□□ -1.01
SSR4-208	ENST00000471880	LINC00337	Q8N6G1	96 aa		8.72	□□□□□ -1.01
SSR4-208	ENST00000471880	ZNF706	Q9Y5V0	76 aa	Predicted RBP	8.72	□□□□□ -1.01
SSR4-208	ENST00000471880	LOC107984156	A0A0G2JMH3	177 aa		8.71	□□□□□ -1.02
SSR4-208	ENST00000471880	SOSTDC1	Q6X4U4	206 aa		8.71	□□□□□ -1.02
SSR4-208	ENST00000471880	ARL17A	Q8IVW1	177 aa		8.71	□□□□□ -1.02
SSR4-208	ENST00000471880	OR13C6P	Q8NH95	151 aa		8.71	□□□□□ -1.02
SSR4-208	ENST00000471880	SMCR5	Q8TEV8	140 aa		8.71	□□□□□ -1.02
SSR4-208	ENST00000471880	PPDPF	Q9H3Y8	114 aa		8.71	□□□□□ -1.02
SSR4-208	ENST00000471880	NDUFC2	O95298	119 aa		8.7	□□□□□ -1.02
SSR4-208	ENST00000471880	S100A2	P29034	98 aa		8.7	□□□□□ -1.02
SSR4-208	ENST00000471880	SCGB1D4	Q6XE38	83 aa		8.7	□□□□□ -1.02
SSR4-208	ENST00000471880	LPA	P08519	4548 aa		8.69	□□□□□ -1.02
SSR4-208	ENST00000471880	EIF4EBP3	O60516	100 aa	Predicted RBP	8.69	□□□□□ -1.02
SSR4-208	ENST00000471880	SPRR1A	P35321	89 aa		8.69	□□□□□ -1.02
SSR4-208	ENST00000471880	C3orf22	Q8N5N4	141 aa		8.69	□□□□□ -1.02
SSR4-208	ENST00000471880	LINC00304	Q8N9R0	145 aa		8.69	□□□□□ -1.02
SSR4-208	ENST00000471880	SPRR4	Q96PI1	79 aa		8.69	□□□□□ -1.02
SSR4-208	ENST00000471880	TRAV23DV6	A0A075B6W5	121 aa		8.68	□□□□□ -1.02
SSR4-208	ENST00000471880	S100A6	P06703	90 aa		8.68	□□□□□ -1.02

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