RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 COX6CP09669 75 aa11.57□□□□□ -0.56
HSPG2-208ENST00000471322 C10orf25Q5T742 122 aa11.57□□□□□ -0.56
HSPG2-208ENST00000471322 C15orf56Q8N910 161 aa11.57□□□□□ -0.56
HSPG2-208ENST00000471322 LINC00526Q96FQ7 95 aa11.56□□□□□ -0.56
HSPG2-208ENST00000471322 CAMK2N2Q96S95 79 aa11.56□□□□□ -0.56
HSPG2-208ENST00000471322 DNAH17Q9UFH2 4485 aa11.56□□□□□ -0.56
HSPG2-208ENST00000471322 HIGD2BQ4VC39 106 aa11.55□□□□□ -0.56
HSPG2-208ENST00000471322 NDUFC2O95298 119 aa11.54□□□□□ -0.56
HSPG2-208ENST00000471322 C9orf116Q5BN46 136 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-208ENST00000471322 H3BMG7 143 aa11.53□□□□□ -0.56
HSPG2-208ENST00000471322 RTL8CO15255 209 aa11.53□□□□□ -0.56
HSPG2-208ENST00000471322 C6orf48Q9UBA6 75 aa11.53□□□□□ -0.56
HSPG2-208ENST00000471322 HECTD4Q9Y4D8 3996 aa11.53□□□□□ -0.56
HSPG2-208ENST00000471322 F8W1H4 67 aa11.53□□□□□ -0.56
HSPG2-208ENST00000471322 TRIAP1O43715 76 aa11.53□□□□□ -0.56
HSPG2-208ENST00000471322 IGKV2-28A0A075B6P5 120 aa11.52□□□□□ -0.57
HSPG2-208ENST00000471322 IGKV2D-28P01615 120 aa11.52□□□□□ -0.57
HSPG2-208ENST00000471322 C1orf134Q5TEV5 83 aa11.52□□□□□ -0.57
HSPG2-208ENST00000471322 TCL1BO95988 128 aa11.51□□□□□ -0.57
HSPG2-208ENST00000471322 PKHD1P08F94 4074 aa11.51□□□□□ -0.57
HSPG2-208ENST00000471322 ATXN8Q156A1 80 aa11.49□□□□□ -0.57
HSPG2-208ENST00000471322 TTC32Q5I0X7 151 aa11.49□□□□□ -0.57
HSPG2-208ENST00000471322 LINC00337Q8N6G1 96 aa11.49□□□□□ -0.57
HSPG2-208ENST00000471322 SYCNQ0VAF6 134 aa11.49□□□□□ -0.57
HSPG2-208ENST00000471322 Q6ZRU5 148 aa11.49□□□□□ -0.57
HSPG2-208ENST00000471322 PKD1P98161 4303 aa11.48□□□□□ -0.57
HSPG2-208ENST00000471322 USP17L23D6RBM5 183 aa11.47□□□□□ -0.57
HSPG2-208ENST00000471322 RPL28P46779 137 aaKnown RBP11.47□□□□□ -0.57
HSPG2-208ENST00000471322 RNF151Q2KHN1 245 aa11.47□□□□□ -0.57
HSPG2-208ENST00000471322 NDUFC2-KCTD14E9PQ53 114 aa11.46□□□□□ -0.58
HSPG2-208ENST00000471322 OR13C6PQ8NH95 151 aa11.46□□□□□ -0.58
HSPG2-208ENST00000471322 DNAH11Q96DT5 4516 aa11.44□□□□□ -0.58
HSPG2-208ENST00000471322 TMEM126AQ9H061 195 aa11.44□□□□□ -0.58
HSPG2-208ENST00000471322 PRO0461Q9UI25 63 aa11.44□□□□□ -0.58
HSPG2-208ENST00000471322 BIRC6Q9NR09 4857 aa11.43□□□□□ -0.58
HSPG2-208ENST00000471322 TNP2Q05952 138 aa11.43□□□□□ -0.58
HSPG2-208ENST00000471322 LINC00336Q6ZUF6 198 aa11.43□□□□□ -0.58
HSPG2-208ENST00000471322 CARD19Q96LW7 228 aa11.43□□□□□ -0.58
HSPG2-208ENST00000471322 TRBV10-2A0A0K0K1G8 114 aa11.42□□□□□ -0.58
HSPG2-208ENST00000471322 LST1O00453 97 aa11.42□□□□□ -0.58
HSPG2-208ENST00000471322 SMIM11BQ8TCY0 68 aa11.42□□□□□ -0.58
HSPG2-208ENST00000471322 PSCAO43653 123 aa11.41□□□□□ -0.58
HSPG2-208ENST00000471322 WFDC2Q14508 124 aa11.41□□□□□ -0.58
HSPG2-208ENST00000471322 H0YGX0 51 aa11.4□□□□□ -0.58
HSPG2-208ENST00000471322 TLX1NBP0CAT3 122 aa11.4□□□□□ -0.58
HSPG2-208ENST00000471322 PRR3P79522 188 aaKnown RBP11.4□□□□□ -0.58
HSPG2-208ENST00000471322 LINC01620Q4KN68 170 aa11.4□□□□□ -0.58
HSPG2-208ENST00000471322 CLEC2BQ92478 149 aa11.39□□□□□ -0.59
HSPG2-208ENST00000471322 XAGE1AQ9HD64 81 aa11.39□□□□□ -0.59
HSPG2-208ENST00000471322 C9JAW5 83 aa11.38□□□□□ -0.59
HSPG2-208ENST00000471322 M0QXV9 152 aa11.38□□□□□ -0.59
HSPG2-208ENST00000471322 C14orf177Q52M58 125 aa11.38□□□□□ -0.59
HSPG2-208ENST00000471322 S100A7L2Q5SY68 101 aa11.38□□□□□ -0.59
HSPG2-208ENST00000471322 Q6ZRN7 208 aaPredicted RBP11.38□□□□□ -0.59
HSPG2-208ENST00000471322 NCR3O14931 201 aa11.37□□□□□ -0.59
HSPG2-208ENST00000471322 SLC25A20O43772 301 aa11.37□□□□□ -0.59
HSPG2-208ENST00000471322 A0A1B0GVY2 172 aa11.36□□□□□ -0.59
HSPG2-208ENST00000471322 TRACP01848 142 aa11.36□□□□□ -0.59
HSPG2-208ENST00000471322 SLPIP03973 132 aa11.36□□□□□ -0.59
HSPG2-208ENST00000471322 Q6ZRP5 223 aa11.36□□□□□ -0.59
HSPG2-208ENST00000471322 MTURNQ8N3F0 131 aa11.36□□□□□ -0.59
HSPG2-208ENST00000471322 Q8NDZ9 215 aa11.36□□□□□ -0.59
HSPG2-208ENST00000471322 SMCPP49901 116 aaPredicted RBP11.35□□□□□ -0.59
HSPG2-208ENST00000471322 GAGE2EQ4V326 116 aa11.35□□□□□ -0.59
HSPG2-208ENST00000471322 OCIAD2Q56VL3 154 aa11.35□□□□□ -0.59
HSPG2-208ENST00000471322 LINC01600Q96MT4 127 aa11.35□□□□□ -0.59
HSPG2-208ENST00000471322 GAGE2DQ9UEU5 116 aa11.35□□□□□ -0.59
HSPG2-208ENST00000471322 LECT2O14960 151 aa11.35□□□□□ -0.59
HSPG2-208ENST00000471322 IGLV6-57P01721 117 aa11.34□□□□□ -0.59
HSPG2-208ENST00000471322 RPL18AQ02543 176 aaKnown RBP11.34□□□□□ -0.59
HSPG2-208ENST00000471322 CBY1Q9Y3M2 126 aa11.34□□□□□ -0.59
HSPG2-208ENST00000471322 K7ERU9 68 aa11.33□□□□□ -0.6
HSPG2-208ENST00000471322 VPREB1P12018 145 aa11.33□□□□□ -0.6
HSPG2-208ENST00000471322 ETDBQ3ZM63 59 aa11.33□□□□□ -0.6
HSPG2-208ENST00000471322 ANKRD29Q8N6D5 301 aa11.33□□□□□ -0.6
HSPG2-208ENST00000471322 DYNC1H1Q14204 4646 aaKnown RBP11.32□□□□□ -0.6
HSPG2-208ENST00000471322 H3BT86 120 aa11.32□□□□□ -0.6
HSPG2-208ENST00000471322 M0R378 163 aa11.32□□□□□ -0.6
HSPG2-208ENST00000471322 CNBPP62633 177 aaKnown RBP11.32□□□□□ -0.6
HSPG2-208ENST00000471322 LOC107984640A0A0U1RRK4 108 aa11.31□□□□□ -0.6
HSPG2-208ENST00000471322 FUSP35637 526 aaKnown RBP eCLIP11.31□□□□□ -0.6
HSPG2-208ENST00000471322 DNAH5Q8TE73 4624 aa11.31□□□□□ -0.6
HSPG2-208ENST00000471322 PLA2G2DQ9UNK4 145 aa11.31□□□□□ -0.6
HSPG2-208ENST00000471322 TEN1Q86WV5 123 aa11.3□□□□□ -0.6
HSPG2-208ENST00000471322 C9orf129Q5T035 196 aaKnown RBP11.29□□□□□ -0.6
HSPG2-208ENST00000471322 A0A1B0GX51 115 aa11.28□□□□□ -0.6
HSPG2-208ENST00000471322 J3QR89 54 aa11.28□□□□□ -0.6
HSPG2-208ENST00000471322 SNCGO76070 127 aa11.28□□□□□ -0.6
HSPG2-208ENST00000471322 FAM218AQ96MZ4 157 aa11.28□□□□□ -0.6
HSPG2-208ENST00000471322 DNAL4O96015 105 aa11.27□□□□□ -0.6
HSPG2-208ENST00000471322 KRTAP10-2P60368 255 aa11.27□□□□□ -0.6
HSPG2-208ENST00000471322 LRP1BQ9NZR2 4599 aa11.27□□□□□ -0.6
HSPG2-208ENST00000471322 KIAA1109Q2LD37 5005 aa11.27□□□□□ -0.61
HSPG2-208ENST00000471322 TRBV10-3A0A0K0K1G6 114 aa11.27□□□□□ -0.61
HSPG2-208ENST00000471322 C6orf99Q4VX62 202 aa11.27□□□□□ -0.61
HSPG2-208ENST00000471322 NKAPP1Q8N9T2 125 aa11.27□□□□□ -0.61
HSPG2-208ENST00000471322 PKIGQ9Y2B9 76 aa11.27□□□□□ -0.61
HSPG2-208ENST00000471322 A0A087WTM6 91 aa11.26□□□□□ -0.61
HSPG2-208ENST00000471322 TRAV23DV6A0A075B6W5 121 aa11.25□□□□□ -0.61
HSPG2-208ENST00000471322 LRCOL1A6NCL2 159 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms