RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 SPENQ96T58 3664 aaKnown RBP4.78□□□□□ -1.64
BRCA1-210ENST00000471181 ZNF575Q86XF7 245 aa4.78□□□□□ -1.64
BRCA1-210ENST00000471181 LINC01561Q8N1V8 128 aa4.78□□□□□ -1.64
BRCA1-210ENST00000471181 WDFY3Q8IZQ1 3526 aa4.78□□□□□ -1.64
BRCA1-210ENST00000471181 CDC42SE1Q9NRR8 79 aa4.78□□□□□ -1.64
BRCA1-210ENST00000471181 C2orf16Q68DN1 1984 aa4.78□□□□□ -1.64
BRCA1-210ENST00000471181 DSCR10P59022 87 aa4.78□□□□□ -1.65
BRCA1-210ENST00000471181 SONP18583 2426 aaKnown RBP4.77□□□□□ -1.65
BRCA1-210ENST00000471181 AVPP01185 164 aa4.77□□□□□ -1.65
BRCA1-210ENST00000471181 KIF25-AS1Q9Y6Z4 181 aa4.77□□□□□ -1.65
BRCA1-210ENST00000471181 URB1-AS1Q96HZ7 61 aa4.77□□□□□ -1.65
BRCA1-210ENST00000471181 CDIP1Q9H305 208 aa4.77□□□□□ -1.65
BRCA1-210ENST00000471181 PRRC2AP48634 2157 aaKnown RBP4.77□□□□□ -1.65
BRCA1-210ENST00000471181 UNC80Q8N2C7 3258 aa4.77□□□□□ -1.65
BRCA1-210ENST00000471181 ERC2-IT1O76042 136 aa4.77□□□□□ -1.65
BRCA1-210ENST00000471181 CNFNQ9BYD5 112 aa4.77□□□□□ -1.65
BRCA1-210ENST00000471181 IGLV5-37A0A075B6J1 123 aa4.76□□□□□ -1.65
BRCA1-210ENST00000471181 PRO3102Q9H379 93 aa4.76□□□□□ -1.65
BRCA1-210ENST00000471181 NCOA6Q14686 2063 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-210ENST00000471181 K7EQZ3 153 aa4.76□□□□□ -1.65
BRCA1-210ENST00000471181 SPG11Q96JI7 2443 aa4.76□□□□□ -1.65
BRCA1-210ENST00000471181 ELOF1P60002 83 aaKnown RBP4.76□□□□□ -1.65
BRCA1-210ENST00000471181 OTOGLQ3ZCN5 2332 aa4.75□□□□□ -1.65
BRCA1-210ENST00000471181 MRPL34Q9BQ48 92 aaKnown RBP4.75□□□□□ -1.65
BRCA1-210ENST00000471181 LINC00483Q53H64 154 aa4.74□□□□□ -1.65
BRCA1-210ENST00000471181 CYP4F30PQ9H0H9 118 aa4.74□□□□□ -1.65
BRCA1-210ENST00000471181 LINC00315P59091 139 aa4.74□□□□□ -1.65
BRCA1-210ENST00000471181 HIVEP2P31629 2446 aa4.74□□□□□ -1.65
BRCA1-210ENST00000471181 Q6ZRX8 168 aa4.74□□□□□ -1.65
BRCA1-210ENST00000471181 OBSCN-AS1Q96MR7 158 aa4.74□□□□□ -1.65
BRCA1-210ENST00000471181 MYO15AQ9UKN7 3530 aa4.74□□□□□ -1.65
BRCA1-210ENST00000471181 IGLV5-48A0A075B6I7 105 aa4.74□□□□□ -1.65
BRCA1-210ENST00000471181 KRTAP10-9P60411 292 aa4.74□□□□□ -1.65
BRCA1-210ENST00000471181 C16orf95Q9H693 158 aa4.74□□□□□ -1.65
BRCA1-210ENST00000471181 PTPN13Q12923 2485 aa4.73□□□□□ -1.65
BRCA1-210ENST00000471181 BCE1O60756 84 aa4.73□□□□□ -1.65
BRCA1-210ENST00000471181 FAM218AQ96MZ4 157 aa4.73□□□□□ -1.65
BRCA1-210ENST00000471181 MYO18BQ8IUG5 2567 aa4.73□□□□□ -1.65
BRCA1-210ENST00000471181 A8MWP4 228 aa4.73□□□□□ -1.65
BRCA1-210ENST00000471181 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
BRCA1-210ENST00000471181 TRBV7-4A0A0J9YYF1 115 aa4.73□□□□□ -1.65
BRCA1-210ENST00000471181 RBM12B-AS1Q9P1G2 102 aa4.73□□□□□ -1.65
BRCA1-210ENST00000471181 RPS28P62857 69 aaKnown RBP4.72□□□□□ -1.65
BRCA1-210ENST00000471181 LCA10Q71F78 164 aa4.72□□□□□ -1.65
BRCA1-210ENST00000471181 DSCAMO60469 2012 aa4.72□□□□□ -1.65
BRCA1-210ENST00000471181 RANBP2P49792 3224 aaKnown RBP4.72□□□□□ -1.65
BRCA1-210ENST00000471181 MED13LQ71F56 2210 aa4.72□□□□□ -1.65
BRCA1-210ENST00000471181 LINC00310P59036 64 aa4.72□□□□□ -1.65
BRCA1-210ENST00000471181 NUP210LQ5VU65 1888 aa4.72□□□□□ -1.65
BRCA1-210ENST00000471181 WIPF1O43516 503 aa4.71□□□□□ -1.65
BRCA1-210ENST00000471181 CD164Q04900 197 aa4.71□□□□□ -1.66
BRCA1-210ENST00000471181 LOC110117498A0A087WWA1 95 aa4.71□□□□□ -1.66
BRCA1-210ENST00000471181 IGLV5-45A0A087WSX0 123 aa4.7□□□□□ -1.66
BRCA1-210ENST00000471181 CRIP3Q6Q6R5 217 aa4.7□□□□□ -1.66
BRCA1-210ENST00000471181 IGLV5-39A0A0G2JS06 123 aa4.7□□□□□ -1.66
BRCA1-210ENST00000471181 A0A1B0GW54 56 aa4.7□□□□□ -1.66
BRCA1-210ENST00000471181 C5orf42Q9H799 3197 aa4.7□□□□□ -1.66
BRCA1-210ENST00000471181 BSNQ9UPA5 3926 aa4.7□□□□□ -1.66
BRCA1-210ENST00000471181 COL27A1Q8IZC6 1860 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-210ENST00000471181 KIAA1549Q9HCM3 1950 aa4.7□□□□□ -1.66
BRCA1-210ENST00000471181 NBDYA0A0U1RRE5 68 aa4.69□□□□□ -1.66
BRCA1-210ENST00000471181 LINC00304Q8N9R0 145 aa4.69□□□□□ -1.66
BRCA1-210ENST00000471181 MED12LQ86YW9 2145 aa4.69□□□□□ -1.66
BRCA1-210ENST00000471181 ADAMTS9Q9P2N4 1935 aa4.69□□□□□ -1.66
BRCA1-210ENST00000471181 FAM168BA1KXE4 195 aa4.69□□□□□ -1.66
BRCA1-210ENST00000471181 CSPG4Q6UVK1 2322 aa4.69□□□□□ -1.66
BRCA1-210ENST00000471181 CDSNQ15517 529 aa4.68□□□□□ -1.66
BRCA1-210ENST00000471181 C8orf17Q9NRJ1 99 aa4.68□□□□□ -1.66
BRCA1-210ENST00000471181 TANC2Q9HCD6 1990 aa4.68□□□□□ -1.66
BRCA1-210ENST00000471181 A0A096LNJ9 63 aa4.68□□□□□ -1.66
BRCA1-210ENST00000471181 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
BRCA1-210ENST00000471181 PLA2G2DQ9UNK4 145 aa4.68□□□□□ -1.66
BRCA1-210ENST00000471181 DNAH14Q0VDD8 3507 aa4.68□□□□□ -1.66
BRCA1-210ENST00000471181 Q8N1X5 172 aa4.67□□□□□ -1.66
BRCA1-210ENST00000471181 COL6A3P12111 3177 aa4.67□□□□□ -1.66
BRCA1-210ENST00000471181 PLXNB3Q9ULL4 1909 aa4.67□□□□□ -1.66
BRCA1-210ENST00000471181 CCDC168Q8NDH2 2452 aa4.67□□□□□ -1.66
BRCA1-210ENST00000471181 MUC4Q99102 2169 aa4.66□□□□□ -1.66
BRCA1-210ENST00000471181 DOPEY1Q5JWR5 2465 aa4.66□□□□□ -1.66
BRCA1-210ENST00000471181 NCOR2Q9Y618 2525 aa4.66□□□□□ -1.66
BRCA1-210ENST00000471181 IGHV3OR16-9A0A0B4J2B5 98 aa4.66□□□□□ -1.66
BRCA1-210ENST00000471181 SMCPP49901 116 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-210ENST00000471181 LRP4O75096 1905 aa4.65□□□□□ -1.66
BRCA1-210ENST00000471181 M0R2T5 61 aa4.65□□□□□ -1.67
BRCA1-210ENST00000471181 HCFC1P51610 2035 aa4.65□□□□□ -1.67
BRCA1-210ENST00000471181 CHD8Q9HCK8 2581 aa4.65□□□□□ -1.67
BRCA1-210ENST00000471181 FAM104AQ969W3 186 aa4.64□□□□□ -1.67
BRCA1-210ENST00000471181 SMR3BP02814 79 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-210ENST00000471181 LINC00336Q6ZUF6 198 aa4.64□□□□□ -1.67
BRCA1-210ENST00000471181 LINC00588Q9Y4M8 146 aa4.64□□□□□ -1.67
BRCA1-210ENST00000471181 EXPH5Q8NEV8 1989 aa4.64□□□□□ -1.67
BRCA1-210ENST00000471181 A0A0A0MQY5 61 aa4.64□□□□□ -1.67
BRCA1-210ENST00000471181 TLX1NBP0CAT3 122 aa4.64□□□□□ -1.67
BRCA1-210ENST00000471181 Q1T7F1 81 aa4.64□□□□□ -1.67
BRCA1-210ENST00000471181 ARHGAP32A7KAX9 2087 aa4.63□□□□□ -1.67
BRCA1-210ENST00000471181 A0A1B0GVX0 72 aa4.63□□□□□ -1.67
BRCA1-210ENST00000471181 ZFHX4Q86UP3 3567 aa4.63□□□□□ -1.67
BRCA1-210ENST00000471181 SORL1Q92673 2214 aa4.63□□□□□ -1.67
BRCA1-210ENST00000471181 TECTAO75443 2155 aa4.63□□□□□ -1.67
BRCA1-210ENST00000471181 VCANP13611 3396 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 188.1 ms