RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 C2orf91Q6ZV80 131 aa18.31■□□□□ 0.52
SOD1-203ENST00000470944 LINC00474Q9P2X8 69 aa18.31■□□□□ 0.52
SOD1-203ENST00000470944 TMEM238C9JI98 176 aa18.3■□□□□ 0.52
SOD1-203ENST00000470944 HAMPP81172 84 aa18.3■□□□□ 0.52
SOD1-203ENST00000470944 DPH3Q96FX2 82 aa18.3■□□□□ 0.52
SOD1-203ENST00000470944 APOBP04114 4563 aaKnown RBP18.29■□□□□ 0.52
SOD1-203ENST00000470944 A0A1W2PNN7 141 aa18.29■□□□□ 0.52
SOD1-203ENST00000470944 SOSTDC1Q6X4U4 206 aa18.29■□□□□ 0.52
SOD1-203ENST00000470944 KRTAP7-1Q8IUC3 87 aa18.28■□□□□ 0.52
SOD1-203ENST00000470944 Q8NDZ9 215 aa18.28■□□□□ 0.52
SOD1-203ENST00000470944 SPANXDQ9BXN6 97 aa18.27■□□□□ 0.52
SOD1-203ENST00000470944 SPANXCQ9NY87 97 aa18.27■□□□□ 0.52
SOD1-203ENST00000470944 A0A087WYN8 130 aa18.26■□□□□ 0.51
SOD1-203ENST00000470944 SERTAD4-AS1Q5TG53 156 aa18.26■□□□□ 0.51
SOD1-203ENST00000470944 UQCR10Q9UDW1 63 aa18.26■□□□□ 0.51
SOD1-203ENST00000470944 LINC00308Q8TCZ7 52 aa18.25■□□□□ 0.51
SOD1-203ENST00000470944 SPANXB1Q9NS25 103 aaPredicted RBP18.24■□□□□ 0.51
SOD1-203ENST00000470944 SCXQ7RTU7 201 aa18.23■□□□□ 0.51
SOD1-203ENST00000470944 FAM19A5Q7Z5A7 132 aaPredicted RBP18.23■□□□□ 0.51
SOD1-203ENST00000470944 CIRBP-AS1Q8TBR5 109 aa18.23■□□□□ 0.51
SOD1-203ENST00000470944 HIGD1BQ9P298 99 aa18.23■□□□□ 0.51
SOD1-203ENST00000470944 LOC107984156A0A0G2JMH3 177 aa18.21■□□□□ 0.51
SOD1-203ENST00000470944 SRSF9Q13242 221 aaKnown RBP eCLIP18.21■□□□□ 0.51
SOD1-203ENST00000470944 ARL17AQ8IVW1 177 aa18.21■□□□□ 0.51
SOD1-203ENST00000470944 MIEN1Q9BRT3 115 aa18.21■□□□□ 0.51
SOD1-203ENST00000470944 XGP55808 180 aa18.2■□□□□ 0.5
SOD1-203ENST00000470944 PLAC8Q9NZF1 115 aa18.2■□□□□ 0.5
SOD1-203ENST00000470944 Q6ZVH6 145 aa18.19■□□□□ 0.5
SOD1-203ENST00000470944 MUSTN1Q8IVN3 82 aa18.19■□□□□ 0.5
SOD1-203ENST00000470944 PLA2G2DQ9UNK4 145 aa18.18■□□□□ 0.5
SOD1-203ENST00000470944 VPREB1P12018 145 aa18.18■□□□□ 0.5
SOD1-203ENST00000470944 PRR3P79522 188 aaKnown RBP18.18■□□□□ 0.5
SOD1-203ENST00000470944 EPM2AB3EWF7 344 aa18.17■□□□□ 0.5
SOD1-203ENST00000470944 HIST1H4GQ99525 98 aa18.17■□□□□ 0.5
SOD1-203ENST00000470944 IFITM1P13164 125 aa18.15■□□□□ 0.5
SOD1-203ENST00000470944 LBHQ53QV2 105 aaPredicted RBP18.14■□□□□ 0.49
SOD1-203ENST00000470944 C22orf24Q9Y442 160 aa18.14■□□□□ 0.49
SOD1-203ENST00000470944 M0QXV9 152 aa18.12■□□□□ 0.49
SOD1-203ENST00000470944 HNRNPA3P51991 378 aaKnown RBP18.12■□□□□ 0.49
SOD1-203ENST00000470944 RPL24P83731 157 aaKnown RBP18.12■□□□□ 0.49
SOD1-203ENST00000470944 PHF5AQ7RTV0 110 aaKnown RBP18.12■□□□□ 0.49
SOD1-203ENST00000470944 IGLV5-37A0A075B6J1 123 aa18.11■□□□□ 0.49
SOD1-203ENST00000470944 NCR3O14931 201 aa18.09■□□□□ 0.49
SOD1-203ENST00000470944 KIAA1109Q2LD37 5005 aa18.09■□□□□ 0.49
SOD1-203ENST00000470944 NKAPP1Q8N9T2 125 aa18.09■□□□□ 0.49
SOD1-203ENST00000470944 NDUFC2O95298 119 aa18.08■□□□□ 0.48
SOD1-203ENST00000470944 COPS9Q8WXC6 57 aa18.08■□□□□ 0.48
SOD1-203ENST00000470944 PPDPFQ9H3Y8 114 aa18.08■□□□□ 0.48
SOD1-203ENST00000470944 GAGE10A6NGK3 116 aa18.06■□□□□ 0.48
SOD1-203ENST00000470944 CDK2AP2O75956 126 aa18.06■□□□□ 0.48
SOD1-203ENST00000470944 MRPL55Q7Z7F7 128 aaKnown RBP18.06■□□□□ 0.48
SOD1-203ENST00000470944 BIRC6Q9NR09 4857 aa18.06■□□□□ 0.48
SOD1-203ENST00000470944 C7orf33Q8WU49 177 aa18.06■□□□□ 0.48
SOD1-203ENST00000470944 RYR1P21817 5038 aa18.05■□□□□ 0.48
SOD1-203ENST00000470944 HSPG2P98160 4391 aa18.05■□□□□ 0.48
SOD1-203ENST00000470944 IGKV2-28A0A075B6P5 120 aa18.05■□□□□ 0.48
SOD1-203ENST00000470944 IGKV2D-28P01615 120 aa18.05■□□□□ 0.48
SOD1-203ENST00000470944 TAL2Q16559 108 aa18.05■□□□□ 0.48
SOD1-203ENST00000470944 A4D1N5 150 aa18.04■□□□□ 0.48
SOD1-203ENST00000470944 HSD52Q0P140 79 aa18.03■□□□□ 0.48
SOD1-203ENST00000470944 CEND1Q8N111 149 aa18.03■□□□□ 0.48
SOD1-203ENST00000470944 LINC00167Q96N53 147 aa18.03■□□□□ 0.48
SOD1-203ENST00000470944 KRTAP11-1Q8IUC1 163 aa18.03■□□□□ 0.48
SOD1-203ENST00000470944 M0R143 59 aa18.02■□□□□ 0.48
SOD1-203ENST00000470944 M0R378 163 aa18.01■□□□□ 0.47
SOD1-203ENST00000470944 RPL37AP8A6NKH3 93 aa18.01■□□□□ 0.47
SOD1-203ENST00000470944 SMR3BP02814 79 aaPredicted RBP18.01■□□□□ 0.47
SOD1-203ENST00000470944 SNHG12Q9BXW3 62 aa18■□□□□ 0.47
SOD1-203ENST00000470944 FXYD2P54710 66 aa17.99■□□□□ 0.47
SOD1-203ENST00000470944 FAT1Q14517 4588 aa17.98■□□□□ 0.47
SOD1-203ENST00000470944 TRBV10-2A0A0K0K1G8 114 aa17.98■□□□□ 0.47
SOD1-203ENST00000470944 LINC00337Q8N6G1 96 aa17.98■□□□□ 0.47
SOD1-203ENST00000470944 UBE2BP63146 152 aa17.95■□□□□ 0.46
SOD1-203ENST00000470944 TRBV10-3A0A0K0K1G6 114 aa17.95■□□□□ 0.46
SOD1-203ENST00000470944 IGLV1-50A0A075B6I6 118 aa17.93■□□□□ 0.46
SOD1-203ENST00000470944 IGLV6-57P01721 117 aa17.91■□□□□ 0.46
SOD1-203ENST00000470944 S100A7L2Q5SY68 101 aa17.91■□□□□ 0.46
SOD1-203ENST00000470944 OR13C6PQ8NH95 151 aa17.91■□□□□ 0.46
SOD1-203ENST00000470944 CFC1BP0CG36 223 aa17.9■□□□□ 0.46
SOD1-203ENST00000470944 CFC1P0CG37 223 aa17.9■□□□□ 0.46
SOD1-203ENST00000470944 LINC00528Q8N1L1 170 aa17.89■□□□□ 0.46
SOD1-203ENST00000470944 HINT1P49773 126 aaPredicted RBP17.89■□□□□ 0.45
SOD1-203ENST00000470944 BVES-AS1Q5T3Y7 98 aa17.89■□□□□ 0.45
SOD1-203ENST00000470944 KRTAP17-1Q9BYP8 105 aa17.89■□□□□ 0.45
SOD1-203ENST00000470944 A6NDN8 102 aa17.88■□□□□ 0.45
SOD1-203ENST00000470944 PSORS1C2Q9UIG4 136 aa17.87■□□□□ 0.45
SOD1-203ENST00000470944 VPS13BQ7Z7G8 4022 aa17.86■□□□□ 0.45
SOD1-203ENST00000470944 TMEM238LA0A1B0GVL6 79 aa17.86■□□□□ 0.45
SOD1-203ENST00000470944 A6NJY4 79 aa17.86■□□□□ 0.45
SOD1-203ENST00000470944 TMEM126AQ9H061 195 aa17.85■□□□□ 0.45
SOD1-203ENST00000470944 TRAV13-2A0A0B4J235 113 aa17.84■□□□□ 0.45
SOD1-203ENST00000470944 NHP2Q9NX24 153 aaKnown RBP17.84■□□□□ 0.45
SOD1-203ENST00000470944 KCNQ1DNQ9H478 68 aa17.83■□□□□ 0.44
SOD1-203ENST00000470944 A0A1B0GV90 55 aa17.82■□□□□ 0.44
SOD1-203ENST00000470944 A0A0B4J2C4 111 aa17.81■□□□□ 0.44
SOD1-203ENST00000470944 K7ERJ3 54 aa17.81■□□□□ 0.44
SOD1-203ENST00000470944 RAB37Q96AX2 223 aa17.81■□□□□ 0.44
SOD1-203ENST00000470944 TRAV23DV6A0A075B6W5 121 aa17.79■□□□□ 0.44
SOD1-203ENST00000470944 RPL13AP40429 203 aaKnown RBP17.79■□□□□ 0.44
SOD1-203ENST00000470944 REG3GQ6UW15 175 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms