RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ADCYAP1P18509 176 aa10.47□□□□□ -0.73
NCKIPSD-209ENST00000470006 LORP23490 312 aaPredicted RBP10.47□□□□□ -0.73
NCKIPSD-209ENST00000470006 KRTAP10-6P60371 365 aaPredicted RBP10.47□□□□□ -0.73
NCKIPSD-209ENST00000470006 KRTAP19-2Q3LHN2 52 aa10.47□□□□□ -0.73
NCKIPSD-209ENST00000470006 MRPL18Q9H0U6 180 aaKnown RBP10.47□□□□□ -0.73
NCKIPSD-209ENST00000470006 Q8NDZ9 215 aa10.46□□□□□ -0.73
NCKIPSD-209ENST00000470006 SMCR5Q8TEV8 140 aa10.46□□□□□ -0.73
NCKIPSD-209ENST00000470006 ZNF625Q96I27 306 aaPredicted RBP10.46□□□□□ -0.73
NCKIPSD-209ENST00000470006 CST9LQ9H4G1 147 aa10.46□□□□□ -0.73
NCKIPSD-209ENST00000470006 IGLV8-61A0A075B6I0 122 aa10.45□□□□□ -0.74
NCKIPSD-209ENST00000470006 IGLV9-49A0A0B4J1Y8 123 aa10.45□□□□□ -0.74
NCKIPSD-209ENST00000470006 MOBPQ13875 183 aa10.45□□□□□ -0.74
NCKIPSD-209ENST00000470006 COX17Q14061 63 aa10.44□□□□□ -0.74
NCKIPSD-209ENST00000470006 PCOTHQ58A44 107 aa10.44□□□□□ -0.74
NCKIPSD-209ENST00000470006 GAGE2AQ6NT46 116 aa10.43□□□□□ -0.74
NCKIPSD-209ENST00000470006 KRTAP9-7A8MTY7 169 aa10.42□□□□□ -0.74
NCKIPSD-209ENST00000470006 RPS29P62273 56 aaKnown RBP10.42□□□□□ -0.74
NCKIPSD-209ENST00000470006 PMVKQ15126 192 aa10.41□□□□□ -0.74
NCKIPSD-209ENST00000470006 ETDCA0A1B0GVM5 59 aa10.39□□□□□ -0.75
NCKIPSD-209ENST00000470006 SSBP3-AS1Q7Z2R9 100 aa10.39□□□□□ -0.75
NCKIPSD-209ENST00000470006 PRYO14603 147 aa10.38□□□□□ -0.75
NCKIPSD-209ENST00000470006 LINC00483Q53H64 154 aa10.38□□□□□ -0.75
NCKIPSD-209ENST00000470006 IGLV5-39A0A0G2JS06 123 aa10.37□□□□□ -0.75
NCKIPSD-209ENST00000470006 LINC00158P58513 81 aa10.37□□□□□ -0.75
NCKIPSD-209ENST00000470006 KIAA1644Q3SXP7 199 aa10.37□□□□□ -0.75
NCKIPSD-209ENST00000470006 NDUFA6P56556 154 aa10.36□□□□□ -0.75
NCKIPSD-209ENST00000470006 A0A0U1RRA0 63 aa10.35□□□□□ -0.75
NCKIPSD-209ENST00000470006 LINC01549A6NIU2 74 aa10.35□□□□□ -0.75
NCKIPSD-209ENST00000470006 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.34□□□□□ -0.75
NCKIPSD-209ENST00000470006 NCR3O14931 201 aa10.33□□□□□ -0.76
NCKIPSD-209ENST00000470006 MT-ND4LP03901 98 aa10.33□□□□□ -0.76
NCKIPSD-209ENST00000470006 C9orf92A6NGG3 77 aa10.32□□□□□ -0.76
NCKIPSD-209ENST00000470006 IGLC3P0DOY3 106 aa10.32□□□□□ -0.76
NCKIPSD-209ENST00000470006 C9orf153Q5TBE3 101 aa10.32□□□□□ -0.76
NCKIPSD-209ENST00000470006 COX6B2Q6YFQ2 88 aa10.32□□□□□ -0.76
NCKIPSD-209ENST00000470006 ANAPC16Q96DE5 110 aa10.32□□□□□ -0.76
NCKIPSD-209ENST00000470006 ATP6V1G1O75348 118 aa10.31□□□□□ -0.76
NCKIPSD-209ENST00000470006 ZNF22P17026 224 aaPredicted RBP10.31□□□□□ -0.76
NCKIPSD-209ENST00000470006 SFTA2Q6UW10 78 aa10.31□□□□□ -0.76
NCKIPSD-209ENST00000470006 SPRR1AP35321 89 aa10.3□□□□□ -0.76
NCKIPSD-209ENST00000470006 BOD1L2Q8IYS8 172 aa10.3□□□□□ -0.76
NCKIPSD-209ENST00000470006 KCNQ1DNQ9H478 68 aa10.3□□□□□ -0.76
NCKIPSD-209ENST00000470006 hCG_2014768A0A024R1R8 64 aa10.29□□□□□ -0.76
NCKIPSD-209ENST00000470006 S100A12P80511 92 aa10.29□□□□□ -0.76
NCKIPSD-209ENST00000470006 ERC2-IT1O76042 136 aa10.28□□□□□ -0.76
NCKIPSD-209ENST00000470006 SMCO4Q9NRQ5 59 aa10.28□□□□□ -0.76
NCKIPSD-209ENST00000470006 KRTAP4-16G5E9R7 235 aaPredicted RBP10.27□□□□□ -0.77
NCKIPSD-209ENST00000470006 TMEM170BQ5T4T1 132 aa10.26□□□□□ -0.77
NCKIPSD-209ENST00000470006 FA2HQ7L5A8 372 aa10.26□□□□□ -0.77
NCKIPSD-209ENST00000470006 TRBV10-3A0A0K0K1G6 114 aa10.25□□□□□ -0.77
NCKIPSD-209ENST00000470006 B5MCH6 92 aa10.24□□□□□ -0.77
NCKIPSD-209ENST00000470006 TRAV9-1A0A075B6T8 112 aa10.23□□□□□ -0.77
NCKIPSD-209ENST00000470006 LINC01546A6NGU7 62 aa10.23□□□□□ -0.77
NCKIPSD-209ENST00000470006 SMIM13P0DJ93 91 aa10.23□□□□□ -0.77
NCKIPSD-209ENST00000470006 MEIG1Q5JSS6 88 aa10.21□□□□□ -0.77
NCKIPSD-209ENST00000470006 C11orf86A6NJI1 115 aa10.2□□□□□ -0.78
NCKIPSD-209ENST00000470006 HRCT1Q6UXD1 115 aa10.2□□□□□ -0.78
NCKIPSD-209ENST00000470006 LIMD2Q9BT23 127 aa10.2□□□□□ -0.78
NCKIPSD-209ENST00000470006 FLGP20930 4061 aaPredicted RBP10.19□□□□□ -0.78
NCKIPSD-209ENST00000470006 MIR7-3HGQ8N6C7 128 aa10.19□□□□□ -0.78
NCKIPSD-209ENST00000470006 Q9BRP9 147 aa10.19□□□□□ -0.78
NCKIPSD-209ENST00000470006 IGLV6-57P01721 117 aa10.18□□□□□ -0.78
NCKIPSD-209ENST00000470006 BAGE3Q86Y29 109 aa10.17□□□□□ -0.78
NCKIPSD-209ENST00000470006 DDTP30046 118 aa10.15□□□□□ -0.78
NCKIPSD-209ENST00000470006 Q6ZRX8 168 aa10.15□□□□□ -0.78
NCKIPSD-209ENST00000470006 JOSD1Q15040 202 aaPredicted RBP10.12□□□□□ -0.79
NCKIPSD-209ENST00000470006 FABP9Q0Z7S8 132 aa10.11□□□□□ -0.79
NCKIPSD-209ENST00000470006 HBDP02042 147 aa10.1□□□□□ -0.79
NCKIPSD-209ENST00000470006 PMCHL1Q16048 86 aa10.1□□□□□ -0.79
NCKIPSD-209ENST00000470006 ST20-AS1Q8NBB2 130 aa10.1□□□□□ -0.79
NCKIPSD-209ENST00000470006 CHTOPQ9Y3Y2 248 aaKnown RBP10.1□□□□□ -0.79
NCKIPSD-209ENST00000470006 A0A096LNJ9 63 aa10.09□□□□□ -0.79
NCKIPSD-209ENST00000470006 TMEM223A0PJW6 202 aa10.09□□□□□ -0.79
NCKIPSD-209ENST00000470006 LINC00587B1AMM8 73 aa10.09□□□□□ -0.79
NCKIPSD-209ENST00000470006 MAP1LC3CQ9BXW4 147 aa10.09□□□□□ -0.79
NCKIPSD-209ENST00000470006 HERV-K104P63124 156 aa10.08□□□□□ -0.8
NCKIPSD-209ENST00000470006 S100A7L2Q5SY68 101 aa10.08□□□□□ -0.8
NCKIPSD-209ENST00000470006 Q6Q795 121 aa10.08□□□□□ -0.8
NCKIPSD-209ENST00000470006 SSPOA2VEC9 5147 aa10.06□□□□□ -0.8
NCKIPSD-209ENST00000470006 S100PP25815 95 aa10.06□□□□□ -0.8
NCKIPSD-209ENST00000470006 TRBV10-2A0A0K0K1G8 114 aa10.05□□□□□ -0.8
NCKIPSD-209ENST00000470006 LINC00614P0C842 121 aa10.05□□□□□ -0.8
NCKIPSD-209ENST00000470006 RPL37P61927 97 aaKnown RBP10.05□□□□□ -0.8
NCKIPSD-209ENST00000470006 TRAV23DV6A0A075B6W5 121 aa10.03□□□□□ -0.8
NCKIPSD-209ENST00000470006 SLC25A34Q6PIV7 304 aa10.03□□□□□ -0.8
NCKIPSD-209ENST00000470006 MYMXA0A1B0GTQ4 84 aa10.02□□□□□ -0.81
NCKIPSD-209ENST00000470006 COX19Q49B96 90 aa10.02□□□□□ -0.81
NCKIPSD-209ENST00000470006 SPANXB1Q9NS25 103 aaPredicted RBP10.02□□□□□ -0.81
NCKIPSD-209ENST00000470006 H7C2G1 150 aa10.01□□□□□ -0.81
NCKIPSD-209ENST00000470006 MIEN1Q9BRT3 115 aa10.01□□□□□ -0.81
NCKIPSD-209ENST00000470006 SEC11CQ9BY50 192 aa10.01□□□□□ -0.81
NCKIPSD-209ENST00000470006 USH2AO75445 5202 aa10.01□□□□□ -0.81
NCKIPSD-209ENST00000470006 CFC1P0CG37 223 aa10□□□□□ -0.81
NCKIPSD-209ENST00000470006 URB1-AS1Q96HZ7 61 aa10□□□□□ -0.81
NCKIPSD-209ENST00000470006 LAMTOR3Q9UHA4 124 aa10□□□□□ -0.81
NCKIPSD-209ENST00000470006 C5orf52A6NGY3 159 aa9.99□□□□□ -0.81
NCKIPSD-209ENST00000470006 ZNF73O43830 326 aaPredicted RBP9.99□□□□□ -0.81
NCKIPSD-209ENST00000470006 HINT1P49773 126 aaPredicted RBP9.99□□□□□ -0.81
NCKIPSD-209ENST00000470006 C18orf32Q8TCD1 76 aa9.97□□□□□ -0.81
NCKIPSD-209ENST00000470006 LOC107984156A0A0G2JMH3 177 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms