RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 HIST1H2BJP06899 126 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 CRYGAP11844 174 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 VPREB1P12018 145 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 HIST1H2BOP23527 126 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 HIST1H2BBP33778 126 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 UBE2AP49459 152 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 HIST1H2BDP58876 126 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 HIST1H2BCP62807 126 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 HIST2H2BEQ16778 126 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.91□□□□□ -1.14
EFNA1-203ENST00000469878 BAGE3Q86Y29 109 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 FAM19A2Q8N3H0 131 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 HIST1H2BHQ93079 126 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 HIST1H2BNQ99877 126 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 HIST1H2BMQ99879 126 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 SND1-IT1Q9HBX3 110 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 ERG28Q9UKR5 140 aa7.91□□□□□ -1.14
EFNA1-203ENST00000469878 SERF1AO75920 110 aa7.9□□□□□ -1.14
EFNA1-203ENST00000469878 HBDP02042 147 aa7.9□□□□□ -1.14
EFNA1-203ENST00000469878 CHCHD1Q96BP2 118 aaKnown RBP7.9□□□□□ -1.14
EFNA1-203ENST00000469878 RETNLBQ9BQ08 111 aa7.89□□□□□ -1.15
EFNA1-203ENST00000469878 TMEM126AQ9H061 195 aa7.88□□□□□ -1.15
EFNA1-203ENST00000469878 TMEM170BQ5T4T1 132 aa7.87□□□□□ -1.15
EFNA1-203ENST00000469878 FAM19A1Q7Z5A9 133 aa7.87□□□□□ -1.15
EFNA1-203ENST00000469878 M0R378 163 aa7.86□□□□□ -1.15
EFNA1-203ENST00000469878 HSBP1O75506 76 aa7.86□□□□□ -1.15
EFNA1-203ENST00000469878 A0A0U1RRA0 63 aa7.85□□□□□ -1.15
EFNA1-203ENST00000469878 COX17Q14061 63 aa7.84□□□□□ -1.15
EFNA1-203ENST00000469878 FAM229BQ4G0N7 80 aa7.84□□□□□ -1.15
EFNA1-203ENST00000469878 CHTOPQ9Y3Y2 248 aaKnown RBP7.84□□□□□ -1.15
EFNA1-203ENST00000469878 C3orf22Q8N5N4 141 aa7.83□□□□□ -1.16
EFNA1-203ENST00000469878 LINC00304Q8N9R0 145 aa7.83□□□□□ -1.16
EFNA1-203ENST00000469878 IFI27L1Q96BM0 104 aa7.83□□□□□ -1.16
EFNA1-203ENST00000469878 TMEM223A0PJW6 202 aa7.82□□□□□ -1.16
EFNA1-203ENST00000469878 RPL24P83731 157 aaKnown RBP7.82□□□□□ -1.16
EFNA1-203ENST00000469878 COA6Q5JTJ3 125 aaKnown RBP7.82□□□□□ -1.16
EFNA1-203ENST00000469878 LEPROTL1O95214 131 aa7.81□□□□□ -1.16
EFNA1-203ENST00000469878 FABP4P15090 132 aa7.81□□□□□ -1.16
EFNA1-203ENST00000469878 LINC00158P58513 81 aa7.81□□□□□ -1.16
EFNA1-203ENST00000469878 PLEKHB2Q96CS7 222 aa7.81□□□□□ -1.16
EFNA1-203ENST00000469878 IGKV2D-26A0A0A0MRZ7 120 aa7.8□□□□□ -1.16
EFNA1-203ENST00000469878 HIGD2AQ9BW72 106 aa7.8□□□□□ -1.16
EFNA1-203ENST00000469878 SMIM13P0DJ93 91 aa7.79□□□□□ -1.16
EFNA1-203ENST00000469878 TRAV12-1A0A0B4J245 112 aa7.78□□□□□ -1.16
EFNA1-203ENST00000469878 MUC17Q685J3 4493 aa7.78□□□□□ -1.16
EFNA1-203ENST00000469878 NCR3O14931 201 aa7.77□□□□□ -1.17
EFNA1-203ENST00000469878 SFTA2Q6UW10 78 aa7.77□□□□□ -1.17
EFNA1-203ENST00000469878 H0Y8G0 127 aa7.76□□□□□ -1.17
EFNA1-203ENST00000469878 MIR7-3HGQ8N6C7 128 aa7.76□□□□□ -1.17
EFNA1-203ENST00000469878 SPRR4Q96PI1 79 aa7.76□□□□□ -1.17
EFNA1-203ENST00000469878 TSPEAR-AS2P59090 65 aa7.75□□□□□ -1.17
EFNA1-203ENST00000469878 MEIG1Q5JSS6 88 aa7.75□□□□□ -1.17
EFNA1-203ENST00000469878 BOD1L2Q8IYS8 172 aa7.75□□□□□ -1.17
EFNA1-203ENST00000469878 PMCHL2Q9BQD1 86 aa7.75□□□□□ -1.17
EFNA1-203ENST00000469878 HSPB8Q9UJY1 196 aa7.75□□□□□ -1.17
EFNA1-203ENST00000469878 IGLV7-46A0A075B6I9 117 aa7.73□□□□□ -1.17
EFNA1-203ENST00000469878 DAND5Q8N907 189 aa7.73□□□□□ -1.17
EFNA1-203ENST00000469878 TRBV10-3A0A0K0K1G6 114 aa7.72□□□□□ -1.17
EFNA1-203ENST00000469878 KRTAP4-16G5E9R7 235 aaPredicted RBP7.72□□□□□ -1.17
EFNA1-203ENST00000469878 SYS1-DBNDD2H3BUS1 97 aa7.72□□□□□ -1.17
EFNA1-203ENST00000469878 PRYO14603 147 aa7.72□□□□□ -1.17
EFNA1-203ENST00000469878 SPRR1AP35321 89 aa7.72□□□□□ -1.17
EFNA1-203ENST00000469878 HIST3H2BBQ8N257 126 aa7.72□□□□□ -1.17
EFNA1-203ENST00000469878 PPDPFQ9H3Y8 114 aa7.72□□□□□ -1.17
EFNA1-203ENST00000469878 NDUFA12Q9UI09 145 aa7.72□□□□□ -1.17
EFNA1-203ENST00000469878 C3orf79P0CE67 100 aa7.71□□□□□ -1.18
EFNA1-203ENST00000469878 TPRXLQ17RH7 258 aa7.71□□□□□ -1.18
EFNA1-203ENST00000469878 MAP1LC3CQ9BXW4 147 aa7.71□□□□□ -1.18
EFNA1-203ENST00000469878 CDIP1Q9H305 208 aa7.71□□□□□ -1.18
EFNA1-203ENST00000469878 SNRPEP62304 92 aaKnown RBP7.7□□□□□ -1.18
EFNA1-203ENST00000469878 SMCR5Q8TEV8 140 aa7.7□□□□□ -1.18
EFNA1-203ENST00000469878 KCNQ1DNQ9H478 68 aa7.7□□□□□ -1.18
EFNA1-203ENST00000469878 HERV-K104P63124 156 aa7.69□□□□□ -1.18
EFNA1-203ENST00000469878 LCE2AQ5TA79 106 aaPredicted RBP7.69□□□□□ -1.18
EFNA1-203ENST00000469878 LINC00337Q8N6G1 96 aa7.69□□□□□ -1.18
EFNA1-203ENST00000469878 Q8NBF4 154 aa7.69□□□□□ -1.18
EFNA1-203ENST00000469878 FAT4Q6V0I7 4981 aa7.68□□□□□ -1.18
EFNA1-203ENST00000469878 C5orf52A6NGY3 159 aa7.68□□□□□ -1.18
EFNA1-203ENST00000469878 LINC01545Q5VT33 79 aa7.68□□□□□ -1.18
EFNA1-203ENST00000469878 HIST1H2BLQ99880 126 aa7.68□□□□□ -1.18
EFNA1-203ENST00000469878 A0A0U1RQV1 116 aa7.67□□□□□ -1.18
EFNA1-203ENST00000469878 MYMXA0A1B0GTQ4 84 aa7.67□□□□□ -1.18
EFNA1-203ENST00000469878 ETDCA0A1B0GVM5 59 aa7.67□□□□□ -1.18
EFNA1-203ENST00000469878 ERC2-IT1O76042 136 aa7.67□□□□□ -1.18
EFNA1-203ENST00000469878 DPM2O94777 84 aa7.67□□□□□ -1.18
EFNA1-203ENST00000469878 IGKCP01834 107 aa7.67□□□□□ -1.18
EFNA1-203ENST00000469878 KRTDAPP60985 99 aa7.67□□□□□ -1.18
EFNA1-203ENST00000469878 PET117Q6UWS5 81 aa7.67□□□□□ -1.18
EFNA1-203ENST00000469878 ZNF706Q9Y5V0 76 aaPredicted RBP7.67□□□□□ -1.18
EFNA1-203ENST00000469878 LEPROTO15243 131 aa7.66□□□□□ -1.18
EFNA1-203ENST00000469878 B5MCH6 92 aa7.65□□□□□ -1.18
EFNA1-203ENST00000469878 S100A6P06703 90 aa7.65□□□□□ -1.18
EFNA1-203ENST00000469878 PLNP26678 52 aa7.65□□□□□ -1.18
EFNA1-203ENST00000469878 GAGE2AQ6NT46 116 aa7.65□□□□□ -1.18
EFNA1-203ENST00000469878 J3QQQ9 107 aa7.64□□□□□ -1.19
EFNA1-203ENST00000469878 EIF4EBP3O60516 100 aaPredicted RBP7.64□□□□□ -1.19
EFNA1-203ENST00000469878 CTAG1AP78358 180 aa7.64□□□□□ -1.19
EFNA1-203ENST00000469878 LINC00483Q53H64 154 aa7.64□□□□□ -1.19
EFNA1-203ENST00000469878 SPAG11AQ6PDA7 123 aa7.64□□□□□ -1.19
EFNA1-203ENST00000469878 Q9BRP9 147 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms