RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 SPANXCQ9NY87 97 aa7.14□□□□□ -1.27
MSH5-214ENST00000468602 FAM30AQ9NZY2 134 aa7.14□□□□□ -1.27
MSH5-214ENST00000468602 HIGD1BQ9P298 99 aa7.14□□□□□ -1.27
MSH5-214ENST00000468602 UQCR10Q9UDW1 63 aa7.14□□□□□ -1.27
MSH5-214ENST00000468602 TMEM238C9JI98 176 aa7.13□□□□□ -1.27
MSH5-214ENST00000468602 XGP55808 180 aa7.13□□□□□ -1.27
MSH5-214ENST00000468602 RPL18AQ02543 176 aaKnown RBP7.13□□□□□ -1.27
MSH5-214ENST00000468602 SND1-IT1Q9HBX3 110 aa7.13□□□□□ -1.27
MSH5-214ENST00000468602 TP73-AS1Q9UF72 201 aa7.13□□□□□ -1.27
MSH5-214ENST00000468602 NDUFC2O95298 119 aa7.12□□□□□ -1.27
MSH5-214ENST00000468602 IFITM1P13164 125 aa7.12□□□□□ -1.27
MSH5-214ENST00000468602 PFN2P35080 140 aa7.12□□□□□ -1.27
MSH5-214ENST00000468602 LINC00158P58513 81 aa7.12□□□□□ -1.27
MSH5-214ENST00000468602 ADAMTSL4-AS1Q5T5F5 129 aa7.12□□□□□ -1.27
MSH5-214ENST00000468602 SLC25A34Q6PIV7 304 aa7.12□□□□□ -1.27
MSH5-214ENST00000468602 MIR7-3HGQ8N6C7 128 aa7.12□□□□□ -1.27
MSH5-214ENST00000468602 A0A087WYN8 130 aa7.11□□□□□ -1.27
MSH5-214ENST00000468602 GAGE2BQ13066 116 aa7.11□□□□□ -1.27
MSH5-214ENST00000468602 KRTAP7-1Q8IUC3 87 aa7.11□□□□□ -1.27
MSH5-214ENST00000468602 COPS9Q8WXC6 57 aa7.11□□□□□ -1.27
MSH5-214ENST00000468602 C14orf144Q96I85 54 aa7.11□□□□□ -1.27
MSH5-214ENST00000468602 APOBP04114 4563 aaKnown RBP7.1□□□□□ -1.27
MSH5-214ENST00000468602 CHTF8P0CG12 524 aa7.1□□□□□ -1.27
MSH5-214ENST00000468602 CTAG1AP78358 180 aa7.1□□□□□ -1.27
MSH5-214ENST00000468602 GAGE2EQ4V326 116 aa7.1□□□□□ -1.27
MSH5-214ENST00000468602 SCGB1D4Q6XE38 83 aa7.1□□□□□ -1.27
MSH5-214ENST00000468602 CIRBP-AS1Q8TBR5 109 aa7.1□□□□□ -1.27
MSH5-214ENST00000468602 GAGE2DQ9UEU5 116 aa7.1□□□□□ -1.27
MSH5-214ENST00000468602 IGKV2-24A0A0C4DH68 120 aa7.09□□□□□ -1.27
MSH5-214ENST00000468602 A0A1W2PNN7 141 aa7.09□□□□□ -1.27
MSH5-214ENST00000468602 M0R143 59 aa7.09□□□□□ -1.27
MSH5-214ENST00000468602 VPREB1P12018 145 aa7.09□□□□□ -1.27
MSH5-214ENST00000468602 RPL24P83731 157 aaKnown RBP7.09□□□□□ -1.27
MSH5-214ENST00000468602 SCXQ7RTU7 201 aa7.09□□□□□ -1.27
MSH5-214ENST00000468602 LINC00308Q8TCZ7 52 aa7.09□□□□□ -1.27
MSH5-214ENST00000468602 XAGE1AQ9HD64 81 aa7.09□□□□□ -1.27
MSH5-214ENST00000468602 TRBV10-2A0A0K0K1G8 114 aa7.08□□□□□ -1.28
MSH5-214ENST00000468602 HNRNPA3P51991 378 aaKnown RBP7.08□□□□□ -1.28
MSH5-214ENST00000468602 TAL2Q16559 108 aa7.08□□□□□ -1.28
MSH5-214ENST00000468602 C2orf91Q6ZV80 131 aa7.08□□□□□ -1.28
MSH5-214ENST00000468602 SOSTDC1Q6X4U4 206 aa7.07□□□□□ -1.28
MSH5-214ENST00000468602 SERTAD4-AS1Q5TG53 156 aa7.06□□□□□ -1.28
MSH5-214ENST00000468602 FAM168BA1KXE4 195 aa7.05□□□□□ -1.28
MSH5-214ENST00000468602 EIF4EBP3O60516 100 aaPredicted RBP7.05□□□□□ -1.28
MSH5-214ENST00000468602 DAND5Q8N907 189 aa7.05□□□□□ -1.28
MSH5-214ENST00000468602 Q8NDZ9 215 aa7.05□□□□□ -1.28
MSH5-214ENST00000468602 C22orf24Q9Y442 160 aa7.05□□□□□ -1.28
MSH5-214ENST00000468602 A0A0U1RRA0 63 aa7.04□□□□□ -1.28
MSH5-214ENST00000468602 M0R378 163 aa7.04□□□□□ -1.28
MSH5-214ENST00000468602 M0QXV9 152 aa7.03□□□□□ -1.28
MSH5-214ENST00000468602 MRPL55Q7Z7F7 128 aaKnown RBP7.03□□□□□ -1.28
MSH5-214ENST00000468602 SNHG12Q9BXW3 62 aa7.03□□□□□ -1.28
MSH5-214ENST00000468602 KRTAP4-5Q9BYR2 181 aa7.03□□□□□ -1.28
MSH5-214ENST00000468602 HSPG2P98160 4391 aa7.03□□□□□ -1.28
MSH5-214ENST00000468602 SRSF9Q13242 221 aaKnown RBP eCLIP7.02□□□□□ -1.29
MSH5-214ENST00000468602 MUSTN1Q8IVN3 82 aa7.02□□□□□ -1.29
MSH5-214ENST00000468602 DPH3Q96FX2 82 aa7.02□□□□□ -1.29
MSH5-214ENST00000468602 IGLV1-50A0A075B6I6 118 aa7.01□□□□□ -1.29
MSH5-214ENST00000468602 IGKV2-28A0A075B6P5 120 aa7.01□□□□□ -1.29
MSH5-214ENST00000468602 IGKV2D-28P01615 120 aa7.01□□□□□ -1.29
MSH5-214ENST00000468602 IGLV6-57P01721 117 aa7.01□□□□□ -1.29
MSH5-214ENST00000468602 COL5A1-AS1Q5SY13 56 aa7.01□□□□□ -1.29
MSH5-214ENST00000468602 FAM19A5Q7Z5A7 132 aaPredicted RBP7.01□□□□□ -1.29
MSH5-214ENST00000468602 NKAPP1Q8N9T2 125 aa7.01□□□□□ -1.29
MSH5-214ENST00000468602 C7orf33Q8WU49 177 aa7.01□□□□□ -1.29
MSH5-214ENST00000468602 LINC00167Q96N53 147 aa7.01□□□□□ -1.29
MSH5-214ENST00000468602 HSD52Q0P140 79 aa7□□□□□ -1.29
MSH5-214ENST00000468602 HIST1H4GQ99525 98 aa7□□□□□ -1.29
MSH5-214ENST00000468602 KCNQ1DNQ9H478 68 aa7□□□□□ -1.29
MSH5-214ENST00000468602 CBY1Q9Y3M2 126 aa7□□□□□ -1.29
MSH5-214ENST00000468602 DMBT1Q9UGM3 2413 aaPredicted RBP7□□□□□ -1.29
MSH5-214ENST00000468602 VPS13BQ7Z7G8 4022 aa6.99□□□□□ -1.29
MSH5-214ENST00000468602 SPRR1AP35321 89 aa6.99□□□□□ -1.29
MSH5-214ENST00000468602 KRTAP10-4P60372 401 aaPredicted RBP6.99□□□□□ -1.29
MSH5-214ENST00000468602 PHF5AQ7RTV0 110 aaKnown RBP6.99□□□□□ -1.29
MSH5-214ENST00000468602 Q8N1X5 172 aa6.99□□□□□ -1.29
MSH5-214ENST00000468602 BATFQ16520 125 aa6.98□□□□□ -1.29
MSH5-214ENST00000468602 CEND1Q8N111 149 aa6.98□□□□□ -1.29
MSH5-214ENST00000468602 TMEM126AQ9H061 195 aa6.98□□□□□ -1.29
MSH5-214ENST00000468602 TRAV13-2A0A0B4J235 113 aa6.97□□□□□ -1.29
MSH5-214ENST00000468602 A4D1N5 150 aa6.97□□□□□ -1.29
MSH5-214ENST00000468602 KRTAP11-1Q8IUC1 163 aa6.97□□□□□ -1.29
MSH5-214ENST00000468602 LINC00337Q8N6G1 96 aa6.97□□□□□ -1.29
MSH5-214ENST00000468602 A0A0B4J2C4 111 aa6.96□□□□□ -1.3
MSH5-214ENST00000468602 A0A1B0GWB2 263 aa6.96□□□□□ -1.3
MSH5-214ENST00000468602 KRTAP4-16G5E9R7 235 aaPredicted RBP6.96□□□□□ -1.3
MSH5-214ENST00000468602 H0Y9J4 135 aa6.96□□□□□ -1.3
MSH5-214ENST00000468602 PRYO14603 147 aa6.96□□□□□ -1.3
MSH5-214ENST00000468602 NPC2P61916 151 aa6.96□□□□□ -1.3
MSH5-214ENST00000468602 PRR3P79522 188 aaKnown RBP6.96□□□□□ -1.3
MSH5-214ENST00000468602 LINC00528Q8N1L1 170 aa6.96□□□□□ -1.3
MSH5-214ENST00000468602 TRBV10-3A0A0K0K1G6 114 aa6.95□□□□□ -1.3
MSH5-214ENST00000468602 TMEM238LA0A1B0GVL6 79 aa6.95□□□□□ -1.3
MSH5-214ENST00000468602 A6NJY4 79 aa6.95□□□□□ -1.3
MSH5-214ENST00000468602 HINT1P49773 126 aaPredicted RBP6.95□□□□□ -1.3
MSH5-214ENST00000468602 PSORS1C2Q9UIG4 136 aa6.95□□□□□ -1.3
MSH5-214ENST00000468602 A0A1B0GV90 55 aa6.94□□□□□ -1.3
MSH5-214ENST00000468602 FAM229AH3BQW9 127 aa6.94□□□□□ -1.3
MSH5-214ENST00000468602 CFC1BP0CG36 223 aa6.94□□□□□ -1.3
MSH5-214ENST00000468602 CFC1P0CG37 223 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms