RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 IFI27L1Q96BM0 104 aa6.8□□□□□ -1.32
COL4A6-205ENST00000468338 HMCN2Q8NDA2 5059 aa6.8□□□□□ -1.32
COL4A6-205ENST00000468338 HSBP1O75506 76 aa6.79□□□□□ -1.32
COL4A6-205ENST00000468338 KRTAP10-8P60410 259 aa6.79□□□□□ -1.32
COL4A6-205ENST00000468338 REG3GQ6UW15 175 aa6.79□□□□□ -1.32
COL4A6-205ENST00000468338 TP73-AS1Q9UF72 201 aa6.79□□□□□ -1.32
COL4A6-205ENST00000468338 CHTOPQ9Y3Y2 248 aaKnown RBP6.79□□□□□ -1.32
COL4A6-205ENST00000468338 C22orf24Q9Y442 160 aa6.79□□□□□ -1.32
COL4A6-205ENST00000468338 FAM19A2Q8N3H0 131 aa6.78□□□□□ -1.32
COL4A6-205ENST00000468338 TMEM170BQ5T4T1 132 aa6.77□□□□□ -1.33
COL4A6-205ENST00000468338 PRR26Q8N8Z3 221 aa6.77□□□□□ -1.33
COL4A6-205ENST00000468338 ZNF625Q96I27 306 aaPredicted RBP6.77□□□□□ -1.33
COL4A6-205ENST00000468338 IGLV5-37A0A075B6J1 123 aa6.76□□□□□ -1.33
COL4A6-205ENST00000468338 TMEM223A0PJW6 202 aa6.76□□□□□ -1.33
COL4A6-205ENST00000468338 NUPR1O60356 82 aa6.76□□□□□ -1.33
COL4A6-205ENST00000468338 SERF1AO75920 110 aa6.76□□□□□ -1.33
COL4A6-205ENST00000468338 UBE2BP63146 152 aa6.76□□□□□ -1.33
COL4A6-205ENST00000468338 COX17Q14061 63 aa6.76□□□□□ -1.33
COL4A6-205ENST00000468338 LBHQ53QV2 105 aaPredicted RBP6.76□□□□□ -1.33
COL4A6-205ENST00000468338 SFTA2Q6UW10 78 aa6.76□□□□□ -1.33
COL4A6-205ENST00000468338 MRPL55Q7Z7F7 128 aaKnown RBP6.75□□□□□ -1.33
COL4A6-205ENST00000468338 DIRC1Q969H9 104 aa6.75□□□□□ -1.33
COL4A6-205ENST00000468338 KRTAP4-12Q9BQ66 201 aa6.75□□□□□ -1.33
COL4A6-205ENST00000468338 ERG28Q9UKR5 140 aa6.75□□□□□ -1.33
COL4A6-205ENST00000468338 H0Y9J4 135 aa6.74□□□□□ -1.33
COL4A6-205ENST00000468338 LEPROTL1O95214 131 aa6.74□□□□□ -1.33
COL4A6-205ENST00000468338 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
COL4A6-205ENST00000468338 PFN2P35080 140 aa6.73□□□□□ -1.33
COL4A6-205ENST00000468338 LINC00167Q96N53 147 aa6.73□□□□□ -1.33
COL4A6-205ENST00000468338 SND1-IT1Q9HBX3 110 aa6.73□□□□□ -1.33
COL4A6-205ENST00000468338 ZNF861PO60384 105 aa6.72□□□□□ -1.33
COL4A6-205ENST00000468338 KRTAP1-4P0C5Y4 121 aa6.72□□□□□ -1.33
COL4A6-205ENST00000468338 KRTAP9-6A0A140TA67 174 aa6.71□□□□□ -1.34
COL4A6-205ENST00000468338 KRTAP9-7A8MTY7 169 aa6.71□□□□□ -1.34
COL4A6-205ENST00000468338 SCO1O75880 301 aa6.71□□□□□ -1.34
COL4A6-205ENST00000468338 KRTAP4-8Q9BYQ9 185 aa6.71□□□□□ -1.34
COL4A6-205ENST00000468338 HSPB8Q9UJY1 196 aa6.71□□□□□ -1.34
COL4A6-205ENST00000468338 BCE1O60756 84 aa6.7□□□□□ -1.34
COL4A6-205ENST00000468338 HIST1H2BKO60814 126 aa6.7□□□□□ -1.34
COL4A6-205ENST00000468338 HIST1H2BJP06899 126 aa6.7□□□□□ -1.34
COL4A6-205ENST00000468338 HIST1H2BOP23527 126 aa6.7□□□□□ -1.34
COL4A6-205ENST00000468338 HIST1H2BBP33778 126 aa6.7□□□□□ -1.34
COL4A6-205ENST00000468338 HIST1H2BDP58876 126 aa6.7□□□□□ -1.34
COL4A6-205ENST00000468338 HIST1H2BCP62807 126 aa6.7□□□□□ -1.34
COL4A6-205ENST00000468338 HIST2H2BEQ16778 126 aa6.7□□□□□ -1.34
COL4A6-205ENST00000468338 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.7□□□□□ -1.34
COL4A6-205ENST00000468338 HIST1H2BHQ93079 126 aa6.7□□□□□ -1.34
COL4A6-205ENST00000468338 HIST1H2BNQ99877 126 aa6.7□□□□□ -1.34
COL4A6-205ENST00000468338 HIST1H2BMQ99879 126 aa6.7□□□□□ -1.34
COL4A6-205ENST00000468338 RPL37AP8A6NKH3 93 aa6.69□□□□□ -1.34
COL4A6-205ENST00000468338 Q8NDZ9 215 aa6.69□□□□□ -1.34
COL4A6-205ENST00000468338 FABP4P15090 132 aa6.68□□□□□ -1.34
COL4A6-205ENST00000468338 PLNP26678 52 aa6.68□□□□□ -1.34
COL4A6-205ENST00000468338 RPL24P83731 157 aaKnown RBP6.68□□□□□ -1.34
COL4A6-205ENST00000468338 KRTAP13-1Q8IUC0 172 aa6.68□□□□□ -1.34
COL4A6-205ENST00000468338 NKAPP1Q8N9T2 125 aa6.68□□□□□ -1.34
COL4A6-205ENST00000468338 IGLV1-50A0A075B6I6 118 aa6.67□□□□□ -1.34
COL4A6-205ENST00000468338 H0Y8G0 127 aa6.67□□□□□ -1.34
COL4A6-205ENST00000468338 HERV-K104P63124 156 aa6.67□□□□□ -1.34
COL4A6-205ENST00000468338 NDUFA12Q9UI09 145 aa6.67□□□□□ -1.34
COL4A6-205ENST00000468338 LEPROTO15243 131 aa6.66□□□□□ -1.34
COL4A6-205ENST00000468338 DPM2O94777 84 aa6.66□□□□□ -1.34
COL4A6-205ENST00000468338 RPL28P46779 137 aaKnown RBP6.66□□□□□ -1.34
COL4A6-205ENST00000468338 LINC00158P58513 81 aa6.66□□□□□ -1.34
COL4A6-205ENST00000468338 TSPEAR-AS2P59090 65 aa6.66□□□□□ -1.34
COL4A6-205ENST00000468338 COA6Q5JTJ3 125 aaKnown RBP6.66□□□□□ -1.34
COL4A6-205ENST00000468338 MYMXA0A1B0GTQ4 84 aa6.65□□□□□ -1.34
COL4A6-205ENST00000468338 LINC00587B1AMM8 73 aa6.65□□□□□ -1.34
COL4A6-205ENST00000468338 IGKCP01834 107 aa6.65□□□□□ -1.34
COL4A6-205ENST00000468338 SMIM13P0DJ93 91 aa6.65□□□□□ -1.34
COL4A6-205ENST00000468338 PLEKHB2Q96CS7 222 aa6.65□□□□□ -1.34
COL4A6-205ENST00000468338 MAP1LC3CQ9BXW4 147 aa6.65□□□□□ -1.34
COL4A6-205ENST00000468338 IGKV2-28A0A075B6P5 120 aa6.64□□□□□ -1.35
COL4A6-205ENST00000468338 LOC107984156A0A0G2JMH3 177 aa6.64□□□□□ -1.35
COL4A6-205ENST00000468338 A0A0U1RRA0 63 aa6.64□□□□□ -1.35
COL4A6-205ENST00000468338 J3QQQ9 107 aa6.64□□□□□ -1.35
COL4A6-205ENST00000468338 IGKV2D-28P01615 120 aa6.64□□□□□ -1.35
COL4A6-205ENST00000468338 LCE4AQ5TA78 99 aa6.64□□□□□ -1.35
COL4A6-205ENST00000468338 ARL17AQ8IVW1 177 aa6.64□□□□□ -1.35
COL4A6-205ENST00000468338 PMCHL2Q9BQD1 86 aa6.64□□□□□ -1.35
COL4A6-205ENST00000468338 SYS1-DBNDD2H3BUS1 97 aa6.63□□□□□ -1.35
COL4A6-205ENST00000468338 M0R378 163 aa6.63□□□□□ -1.35
COL4A6-205ENST00000468338 MEIG1Q5JSS6 88 aa6.63□□□□□ -1.35
COL4A6-205ENST00000468338 MIR7-3HGQ8N6C7 128 aa6.63□□□□□ -1.35
COL4A6-205ENST00000468338 TMEM126AQ9H061 195 aa6.63□□□□□ -1.35
COL4A6-205ENST00000468338 RPL13AP40429 203 aaKnown RBP6.62□□□□□ -1.35
COL4A6-205ENST00000468338 NMUP48645 174 aa6.62□□□□□ -1.35
COL4A6-205ENST00000468338 HERVK_113P61574 105 aa6.62□□□□□ -1.35
COL4A6-205ENST00000468338 UBR4Q5T4S7 5183 aa6.61□□□□□ -1.35
COL4A6-205ENST00000468338 LRP2P98164 4655 aa6.61□□□□□ -1.35
COL4A6-205ENST00000468338 IGKV2D-26A0A0A0MRZ7 120 aa6.61□□□□□ -1.35
COL4A6-205ENST00000468338 TMEM238C9JI98 176 aa6.61□□□□□ -1.35
COL4A6-205ENST00000468338 E9PLD3 99 aa6.61□□□□□ -1.35
COL4A6-205ENST00000468338 LINC01545Q5VT33 79 aa6.61□□□□□ -1.35
COL4A6-205ENST00000468338 BOD1L2Q8IYS8 172 aa6.61□□□□□ -1.35
COL4A6-205ENST00000468338 ATP6V1G1O75348 118 aa6.6□□□□□ -1.35
COL4A6-205ENST00000468338 UBE2AP49459 152 aa6.6□□□□□ -1.35
COL4A6-205ENST00000468338 A0A087X002 238 aa6.59□□□□□ -1.35
COL4A6-205ENST00000468338 SPRR1AP35321 89 aa6.59□□□□□ -1.35
COL4A6-205ENST00000468338 PRLHP81277 87 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms