RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 IGHV3-30-3P0DP02 117 aa5.58□□□□□ -1.52
BRCA1-208ENST00000468300 FXYD2P54710 66 aa5.58□□□□□ -1.52
BRCA1-208ENST00000468300 LINC00588Q9Y4M8 146 aa5.58□□□□□ -1.52
BRCA1-208ENST00000468300 LEPROTO15243 131 aa5.57□□□□□ -1.52
BRCA1-208ENST00000468300 LGALS3P17931 250 aaKnown RBP5.57□□□□□ -1.52
BRCA1-208ENST00000468300 CLPSL2Q6UWE3 100 aa5.57□□□□□ -1.52
BRCA1-208ENST00000468300 IGHV1-58A0A0C4DH39 117 aa5.57□□□□□ -1.52
BRCA1-208ENST00000468300 NDUFC2-KCTD14E9PQ53 114 aa5.57□□□□□ -1.52
BRCA1-208ENST00000468300 KTN1-AS1Q86SY8 53 aa5.57□□□□□ -1.52
BRCA1-208ENST00000468300 C6orf223Q8N319 242 aa5.57□□□□□ -1.52
BRCA1-208ENST00000468300 MYMXA0A1B0GTQ4 84 aa5.57□□□□□ -1.52
BRCA1-208ENST00000468300 DNAH10Q8IVF4 4471 aa5.57□□□□□ -1.52
BRCA1-208ENST00000468300 VPS13DQ5THJ4 4388 aa5.57□□□□□ -1.52
BRCA1-208ENST00000468300 KRTAP26-1Q6PEX3 210 aa5.56□□□□□ -1.52
BRCA1-208ENST00000468300 SFTA2Q6UW10 78 aa5.56□□□□□ -1.52
BRCA1-208ENST00000468300 FP248Q71RG6 208 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-208ENST00000468300 APLNQ9ULZ1 77 aa5.56□□□□□ -1.52
BRCA1-208ENST00000468300 IGKV3OR2-268A0A0C4DH90 116 aa5.56□□□□□ -1.52
BRCA1-208ENST00000468300 LOC107984156A0A0G2JMH3 177 aa5.56□□□□□ -1.52
BRCA1-208ENST00000468300 ANGP03950 147 aaKnown RBP5.56□□□□□ -1.52
BRCA1-208ENST00000468300 REG3AQ06141 175 aa5.56□□□□□ -1.52
BRCA1-208ENST00000468300 ARL17AQ8IVW1 177 aa5.56□□□□□ -1.52
BRCA1-208ENST00000468300 SCGB1D4Q6XE38 83 aa5.56□□□□□ -1.52
BRCA1-208ENST00000468300 A0A087WZ39 114 aa5.55□□□□□ -1.52
BRCA1-208ENST00000468300 TRBV7-7A0A0K0K1E9 115 aa5.55□□□□□ -1.52
BRCA1-208ENST00000468300 TMEM256-PLSCR3K7ERE1 68 aa5.55□□□□□ -1.52
BRCA1-208ENST00000468300 IGHV3-30P01768 117 aa5.55□□□□□ -1.52
BRCA1-208ENST00000468300 IGHV3-33P01772 117 aa5.55□□□□□ -1.52
BRCA1-208ENST00000468300 IGHV3-30-5P0DP03 117 aa5.55□□□□□ -1.52
BRCA1-208ENST00000468300 TENM2Q9NT68 2774 aa5.55□□□□□ -1.52
BRCA1-208ENST00000468300 ATOX1O00244 68 aa5.54□□□□□ -1.52
BRCA1-208ENST00000468300 DNAH10OSP0CZ25 163 aa5.54□□□□□ -1.52
BRCA1-208ENST00000468300 CXCL5P42830 114 aa5.54□□□□□ -1.52
BRCA1-208ENST00000468300 LINC01556Q5JQF7 62 aa5.54□□□□□ -1.52
BRCA1-208ENST00000468300 LITAFQ99732 161 aa5.54□□□□□ -1.52
BRCA1-208ENST00000468300 KLK12Q9UKR0 248 aa5.54□□□□□ -1.52
BRCA1-208ENST00000468300 KMT2AQ03164 3969 aa5.54□□□□□ -1.52
BRCA1-208ENST00000468300 ZNF815PA8K554 130 aa5.54□□□□□ -1.52
BRCA1-208ENST00000468300 UPK3BQ9BT76 320 aa5.54□□□□□ -1.52
BRCA1-208ENST00000468300 IMUPQ9GZP8 106 aa5.54□□□□□ -1.52
BRCA1-208ENST00000468300 ZNF73O43830 326 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-208ENST00000468300 NDUFS5O43920 106 aa5.54□□□□□ -1.52
BRCA1-208ENST00000468300 XCL1P47992 114 aa5.54□□□□□ -1.52
BRCA1-208ENST00000468300 MPLKIPQ8TAP9 179 aa5.54□□□□□ -1.52
BRCA1-208ENST00000468300 COPS9Q8WXC6 57 aa5.54□□□□□ -1.52
BRCA1-208ENST00000468300 CHCHD10Q8WYQ3 142 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-208ENST00000468300 IGLV10-54A0A075B6I4 117 aa5.53□□□□□ -1.52
BRCA1-208ENST00000468300 ZNF625Q96I27 306 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-208ENST00000468300 C5orf38Q86SI9 138 aa5.53□□□□□ -1.52
BRCA1-208ENST00000468300 LINC00474Q9P2X8 69 aa5.53□□□□□ -1.52
BRCA1-208ENST00000468300 A8MUN3 132 aa5.52□□□□□ -1.53
BRCA1-208ENST00000468300 M0R378 163 aa5.52□□□□□ -1.53
BRCA1-208ENST00000468300 TRBV7-6A0A0J9YX20 115 aa5.52□□□□□ -1.53
BRCA1-208ENST00000468300 A0A0J9YXY3 114 aa5.52□□□□□ -1.53
BRCA1-208ENST00000468300 KIAA0087Q14695 138 aa5.52□□□□□ -1.53
BRCA1-208ENST00000468300 NDUFA1O15239 70 aa5.51□□□□□ -1.53
BRCA1-208ENST00000468300 ADAMTSL4-AS1Q5T5F5 129 aa5.51□□□□□ -1.53
BRCA1-208ENST00000468300 PLA2G2DQ9UNK4 145 aa5.51□□□□□ -1.53
BRCA1-208ENST00000468300 KRTAP1-5Q9BYS1 174 aa5.51□□□□□ -1.53
BRCA1-208ENST00000468300 NDUFA12Q9UI09 145 aa5.51□□□□□ -1.53
BRCA1-208ENST00000468300 TGP01266 2768 aa5.5□□□□□ -1.53
BRCA1-208ENST00000468300 NTN5Q8WTR8 489 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-208ENST00000468300 EIF4EBP3O60516 100 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-208ENST00000468300 COX7B2Q8TF08 81 aa5.5□□□□□ -1.53
BRCA1-208ENST00000468300 UBE2WQ96B02 151 aa5.5□□□□□ -1.53
BRCA1-208ENST00000468300 ZNF706Q9Y5V0 76 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-208ENST00000468300 LST1O00453 97 aa5.49□□□□□ -1.53
BRCA1-208ENST00000468300 CCL18P55774 89 aa5.49□□□□□ -1.53
BRCA1-208ENST00000468300 DNAH2Q9P225 4427 aa5.49□□□□□ -1.53
BRCA1-208ENST00000468300 NUPR2A6NF83 97 aa5.49□□□□□ -1.53
BRCA1-208ENST00000468300 IBA57-AS1B1ANH7 110 aa5.49□□□□□ -1.53
BRCA1-208ENST00000468300 MIAQ16674 131 aa5.49□□□□□ -1.53
BRCA1-208ENST00000468300 SERP2Q8N6R1 65 aa5.49□□□□□ -1.53
BRCA1-208ENST00000468300 DNAH6Q9C0G6 4158 aa5.48□□□□□ -1.53
BRCA1-208ENST00000468300 COX7A2LO14548 114 aa5.48□□□□□ -1.53
BRCA1-208ENST00000468300 SLC25A20O43772 301 aa5.48□□□□□ -1.53
BRCA1-208ENST00000468300 Q8IZM0 81 aa5.48□□□□□ -1.53
BRCA1-208ENST00000468300 CASC10Q5T4H9 136 aa5.47□□□□□ -1.53
BRCA1-208ENST00000468300 EPM2AB3EWF7 344 aa5.47□□□□□ -1.53
BRCA1-208ENST00000468300 C2orf82Q6UX34 121 aa5.47□□□□□ -1.53
BRCA1-208ENST00000468300 C15orf56Q8N910 161 aa5.47□□□□□ -1.53
BRCA1-208ENST00000468300 HYDINQ4G0P3 5121 aa5.47□□□□□ -1.53
BRCA1-208ENST00000468300 FRAS1Q86XX4 4008 aa5.46□□□□□ -1.53
BRCA1-208ENST00000468300 CRPP02741 224 aa5.46□□□□□ -1.54
BRCA1-208ENST00000468300 HIST1H4GQ99525 98 aa5.46□□□□□ -1.54
BRCA1-208ENST00000468300 SOSTDC1Q6X4U4 206 aa5.46□□□□□ -1.54
BRCA1-208ENST00000468300 DAND5Q8N907 189 aa5.46□□□□□ -1.54
BRCA1-208ENST00000468300 MP68P56378 58 aa5.45□□□□□ -1.54
BRCA1-208ENST00000468300 C10orf25Q5T742 122 aa5.45□□□□□ -1.54
BRCA1-208ENST00000468300 TOMM7Q9P0U1 55 aa5.45□□□□□ -1.54
BRCA1-208ENST00000468300 MUSTN1Q8IVN3 82 aa5.45□□□□□ -1.54
BRCA1-208ENST00000468300 ALMS1Q8TCU4 4167 aa5.45□□□□□ -1.54
BRCA1-208ENST00000468300 TEX49A0A1B0GTD5 131 aa5.44□□□□□ -1.54
BRCA1-208ENST00000468300 TNP2Q05952 138 aa5.44□□□□□ -1.54
BRCA1-208ENST00000468300 LCA10Q71F78 164 aa5.44□□□□□ -1.54
BRCA1-208ENST00000468300 Q9HAA7 133 aa5.44□□□□□ -1.54
BRCA1-208ENST00000468300 LINC00313P59037 77 aa5.43□□□□□ -1.54
BRCA1-208ENST00000468300 CCKP06307 115 aa5.43□□□□□ -1.54
BRCA1-208ENST00000468300 FUSP35637 526 aaKnown RBP eCLIP5.43□□□□□ -1.54
BRCA1-208ENST00000468300 C6orf99Q4VX62 202 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 299.3 ms