RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 SLC25A20O43772 301 aa2.18□□□□□ -2.06
SSR3-204ENST00000467733 CKS1BP61024 79 aa2.18□□□□□ -2.06
SSR3-204ENST00000467733 CCL20P78556 96 aa2.18□□□□□ -2.06
SSR3-204ENST00000467733 LINC01561Q8N1V8 128 aa2.18□□□□□ -2.06
SSR3-204ENST00000467733 KCNRGQ8N5I3 272 aa2.18□□□□□ -2.06
SSR3-204ENST00000467733 NKAPP1Q8N9T2 125 aa2.18□□□□□ -2.06
SSR3-204ENST00000467733 FAM213BQ8TBF2 198 aa2.18□□□□□ -2.06
SSR3-204ENST00000467733 SFT2D1Q8WV19 159 aa2.18□□□□□ -2.06
SSR3-204ENST00000467733 SPRR4Q96PI1 79 aa2.18□□□□□ -2.06
SSR3-204ENST00000467733 BIN3Q9NQY0 253 aa2.18□□□□□ -2.06
SSR3-204ENST00000467733 TRBV20OR9-2A0A075B6H5 130 aa2.17□□□□□ -2.06
SSR3-204ENST00000467733 IGKV2-28A0A075B6P5 120 aa2.17□□□□□ -2.06
SSR3-204ENST00000467733 F8VRH5 84 aa2.17□□□□□ -2.06
SSR3-204ENST00000467733 IGKV2D-28P01615 120 aa2.17□□□□□ -2.06
SSR3-204ENST00000467733 RPL39P62891 51 aaKnown RBP2.17□□□□□ -2.06
SSR3-204ENST00000467733 FAM19A1Q7Z5A9 133 aa2.17□□□□□ -2.06
SSR3-204ENST00000467733 CBLN2Q8IUK8 224 aa2.17□□□□□ -2.06
SSR3-204ENST00000467733 Q8IZM0 81 aa2.17□□□□□ -2.06
SSR3-204ENST00000467733 MBD3L1Q8WWY6 194 aa2.17□□□□□ -2.06
SSR3-204ENST00000467733 S100ZQ8WXG8 99 aa2.17□□□□□ -2.06
SSR3-204ENST00000467733 TMEM126AQ9H061 195 aa2.17□□□□□ -2.06
SSR3-204ENST00000467733 MANBALQ9NQG1 85 aa2.17□□□□□ -2.06
SSR3-204ENST00000467733 ZNF706Q9Y5V0 76 aaPredicted RBP2.17□□□□□ -2.06
SSR3-204ENST00000467733 NEBP20929 6669 aa2.16□□□□□ -2.06
SSR3-204ENST00000467733 TMEM238C9JI98 176 aa2.16□□□□□ -2.06
SSR3-204ENST00000467733 SMKR1H3BMG3 65 aa2.16□□□□□ -2.06
SSR3-204ENST00000467733 M0R378 163 aa2.16□□□□□ -2.06
SSR3-204ENST00000467733 PPP1R2P9O14990 202 aa2.16□□□□□ -2.06
SSR3-204ENST00000467733 TCAPO15273 167 aa2.16□□□□□ -2.06
SSR3-204ENST00000467733 PPP1R17O96001 155 aa2.16□□□□□ -2.06
SSR3-204ENST00000467733 RAB4AP20338 218 aa2.16□□□□□ -2.06
SSR3-204ENST00000467733 C6orf226Q5I0X4 101 aa2.16□□□□□ -2.06
SSR3-204ENST00000467733 HIGD2AQ9BW72 106 aa2.16□□□□□ -2.06
SSR3-204ENST00000467733 TMEM191AQ9H0A3 160 aa2.16□□□□□ -2.06
SSR3-204ENST00000467733 GEMIN7Q9H840 131 aaKnown RBP2.16□□□□□ -2.06
SSR3-204ENST00000467733 LINC00846Q9NV44 126 aa2.16□□□□□ -2.06
SSR3-204ENST00000467733 TOMM7Q9P0U1 55 aa2.16□□□□□ -2.06
SSR3-204ENST00000467733 GNG13Q9P2W3 67 aa2.16□□□□□ -2.06
SSR3-204ENST00000467733 A0A1B0GUT8 65 aa2.15□□□□□ -2.07
SSR3-204ENST00000467733 UMAD1C9J7I0 102 aa2.15□□□□□ -2.07
SSR3-204ENST00000467733 PDE6DO43924 150 aa2.15□□□□□ -2.07
SSR3-204ENST00000467733 SCO1O75880 301 aa2.15□□□□□ -2.07
SSR3-204ENST00000467733 CXCL5P42830 114 aa2.15□□□□□ -2.07
SSR3-204ENST00000467733 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
SSR3-204ENST00000467733 Q6ZN92 141 aa2.15□□□□□ -2.07
SSR3-204ENST00000467733 AMN1Q8IY45 258 aa2.15□□□□□ -2.07
SSR3-204ENST00000467733 Q8N9L7 120 aa2.15□□□□□ -2.07
SSR3-204ENST00000467733 BORCS7Q96B45 105 aa2.15□□□□□ -2.07
SSR3-204ENST00000467733 BATF3Q9NR55 127 aa2.15□□□□□ -2.07
SSR3-204ENST00000467733 C9orf92A6NGG3 77 aa2.14□□□□□ -2.07
SSR3-204ENST00000467733 A8MWL6 223 aa2.14□□□□□ -2.07
SSR3-204ENST00000467733 K7EN84 100 aa2.14□□□□□ -2.07
SSR3-204ENST00000467733 GIPP09681 153 aaPredicted RBP2.14□□□□□ -2.07
SSR3-204ENST00000467733 IFI27P40305 119 aaPredicted RBP2.14□□□□□ -2.07
SSR3-204ENST00000467733 MOBPQ13875 183 aa2.14□□□□□ -2.07
SSR3-204ENST00000467733 KRTAP19-6Q3LI70 58 aa2.14□□□□□ -2.07
SSR3-204ENST00000467733 LINC00483Q53H64 154 aa2.14□□□□□ -2.07
SSR3-204ENST00000467733 LINC01551Q86U37 167 aa2.14□□□□□ -2.07
SSR3-204ENST00000467733 TMEM141Q96I45 108 aa2.14□□□□□ -2.07
SSR3-204ENST00000467733 C20orf78Q9BR46 151 aa2.14□□□□□ -2.07
SSR3-204ENST00000467733 SMIM2Q9BVW6 85 aa2.14□□□□□ -2.07
SSR3-204ENST00000467733 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
SSR3-204ENST00000467733 MED9Q9NWA0 146 aa2.14□□□□□ -2.07
SSR3-204ENST00000467733 HIGD1CA8MV81 97 aa2.13□□□□□ -2.07
SSR3-204ENST00000467733 GATCO43716 136 aaKnown RBP2.13□□□□□ -2.07
SSR3-204ENST00000467733 MT2AP02795 61 aa2.13□□□□□ -2.07
SSR3-204ENST00000467733 TEX43Q6ZNM6 134 aa2.13□□□□□ -2.07
SSR3-204ENST00000467733 SSBP3-AS1Q7Z2R9 100 aa2.13□□□□□ -2.07
SSR3-204ENST00000467733 C2orf88Q9BSF0 95 aa2.13□□□□□ -2.07
SSR3-204ENST00000467733 TRBV24-1A0A075B6N3 115 aa2.12□□□□□ -2.07
SSR3-204ENST00000467733 CEBPGP53567 150 aa2.12□□□□□ -2.07
SSR3-204ENST00000467733 RPL37P61927 97 aaKnown RBP2.12□□□□□ -2.07
SSR3-204ENST00000467733 MRPL51Q4U2R6 128 aaKnown RBP2.12□□□□□ -2.07
SSR3-204ENST00000467733 LINC00299Q6ZSB3 139 aa2.12□□□□□ -2.07
SSR3-204ENST00000467733 FAM231DQ6ZW35 169 aa2.12□□□□□ -2.07
SSR3-204ENST00000467733 FAM19A3Q7Z5A8 133 aa2.12□□□□□ -2.07
SSR3-204ENST00000467733 EIF5A2Q9GZV4 153 aaKnown RBP2.12□□□□□ -2.07
SSR3-204ENST00000467733 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
SSR3-204ENST00000467733 MUC12Q9UKN1 5478 aa2.11□□□□□ -2.07
SSR3-204ENST00000467733 KANTRA0A1W2PQU2 76 aa2.11□□□□□ -2.07
SSR3-204ENST00000467733 LINC00862A6NCI5 91 aa2.11□□□□□ -2.07
SSR3-204ENST00000467733 IGLV6-57P01721 117 aa2.11□□□□□ -2.07
SSR3-204ENST00000467733 MT1FP04733 61 aa2.11□□□□□ -2.07
SSR3-204ENST00000467733 HERVK_113P63121 156 aa2.11□□□□□ -2.07
SSR3-204ENST00000467733 FAM104BQ5XKR9 115 aa2.11□□□□□ -2.07
SSR3-204ENST00000467733 AKAP14Q86UN6 197 aa2.11□□□□□ -2.07
SSR3-204ENST00000467733 AMELXQ99217 191 aa2.11□□□□□ -2.07
SSR3-204ENST00000467733 LIMD2Q9BT23 127 aa2.11□□□□□ -2.07
SSR3-204ENST00000467733 CDKN2A-AS1Q9UH64 79 aa2.11□□□□□ -2.07
SSR3-204ENST00000467733 TEX46H3BTG2 121 aa2.1□□□□□ -2.07
SSR3-204ENST00000467733 NPYP01303 97 aa2.1□□□□□ -2.07
SSR3-204ENST00000467733 CKS2P33552 79 aa2.1□□□□□ -2.07
SSR3-204ENST00000467733 RAB5BP61020 215 aa2.1□□□□□ -2.07
SSR3-204ENST00000467733 SEC11AP67812 179 aa2.1□□□□□ -2.07
SSR3-204ENST00000467733 ZNF345Q14585 488 aa2.1□□□□□ -2.07
SSR3-204ENST00000467733 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
SSR3-204ENST00000467733 Q6Q795 121 aa2.1□□□□□ -2.07
SSR3-204ENST00000467733 Q8NDZ9 215 aa2.1□□□□□ -2.07
SSR3-204ENST00000467733 COX7B2Q8TF08 81 aa2.1□□□□□ -2.07
SSR3-204ENST00000467733 TIMM17AQ99595 171 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms