RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 TMEM238C9JI98 176 aa8.21□□□□□ -1.1
ATG4B-214ENST00000465399 HBDP02042 147 aa8.21□□□□□ -1.1
ATG4B-214ENST00000465399 IGLC3P0DOY3 106 aa8.21□□□□□ -1.1
ATG4B-214ENST00000465399 VPREB1P12018 145 aa8.21□□□□□ -1.1
ATG4B-214ENST00000465399 NDUFA6P56556 154 aa8.21□□□□□ -1.1
ATG4B-214ENST00000465399 COX17Q14061 63 aa8.21□□□□□ -1.1
ATG4B-214ENST00000465399 SND1-IT1Q9HBX3 110 aa8.21□□□□□ -1.1
ATG4B-214ENST00000465399 ERG28Q9UKR5 140 aa8.21□□□□□ -1.1
ATG4B-214ENST00000465399 MUC17Q685J3 4493 aa8.21□□□□□ -1.1
ATG4B-214ENST00000465399 IGLV5-39A0A0G2JS06 123 aa8.2□□□□□ -1.1
ATG4B-214ENST00000465399 TRGC2P03986 189 aa8.19□□□□□ -1.1
ATG4B-214ENST00000465399 M0R378 163 aa8.18□□□□□ -1.1
ATG4B-214ENST00000465399 ZNF22P17026 224 aaPredicted RBP8.18□□□□□ -1.1
ATG4B-214ENST00000465399 PLEKHB2Q96CS7 222 aa8.18□□□□□ -1.1
ATG4B-214ENST00000465399 COLCA2A8K830 154 aa8.17□□□□□ -1.1
ATG4B-214ENST00000465399 SFTA2Q6UW10 78 aa8.17□□□□□ -1.1
ATG4B-214ENST00000465399 BAGE3Q86Y29 109 aa8.17□□□□□ -1.1
ATG4B-214ENST00000465399 HIGD2AQ9BW72 106 aa8.17□□□□□ -1.1
ATG4B-214ENST00000465399 C11orf86A6NJI1 115 aa8.16□□□□□ -1.1
ATG4B-214ENST00000465399 SPAG11AQ6PDA7 123 aa8.16□□□□□ -1.1
ATG4B-214ENST00000465399 FAM19A2Q8N3H0 131 aa8.16□□□□□ -1.1
ATG4B-214ENST00000465399 C3orf22Q8N5N4 141 aa8.16□□□□□ -1.1
ATG4B-214ENST00000465399 CHCHD1Q96BP2 118 aaKnown RBP8.16□□□□□ -1.1
ATG4B-214ENST00000465399 ZNF625Q96I27 306 aaPredicted RBP8.16□□□□□ -1.1
ATG4B-214ENST00000465399 PPDPFQ9H3Y8 114 aa8.16□□□□□ -1.1
ATG4B-214ENST00000465399 LINC00310P59036 64 aa8.15□□□□□ -1.1
ATG4B-214ENST00000465399 Q8NDZ9 215 aa8.14□□□□□ -1.11
ATG4B-214ENST00000465399 C4orf48Q5BLP8 95 aa8.13□□□□□ -1.11
ATG4B-214ENST00000465399 TMEM170BQ5T4T1 132 aa8.13□□□□□ -1.11
ATG4B-214ENST00000465399 CHTOPQ9Y3Y2 248 aaKnown RBP8.13□□□□□ -1.11
ATG4B-214ENST00000465399 ZNF706Q9Y5V0 76 aaPredicted RBP8.13□□□□□ -1.11
ATG4B-214ENST00000465399 FP248Q71RG6 208 aaPredicted RBP8.12□□□□□ -1.11
ATG4B-214ENST00000465399 IFI27L1Q96BM0 104 aa8.12□□□□□ -1.11
ATG4B-214ENST00000465399 SPRR4Q96PI1 79 aa8.12□□□□□ -1.11
ATG4B-214ENST00000465399 SERF1AO75920 110 aa8.11□□□□□ -1.11
ATG4B-214ENST00000465399 LINC00158P58513 81 aa8.11□□□□□ -1.11
ATG4B-214ENST00000465399 HSBP1O75506 76 aa8.1□□□□□ -1.11
ATG4B-214ENST00000465399 TRAV12-1A0A0B4J245 112 aa8.09□□□□□ -1.11
ATG4B-214ENST00000465399 LINC00337Q8N6G1 96 aa8.09□□□□□ -1.11
ATG4B-214ENST00000465399 A0A0U1RRA0 63 aa8.08□□□□□ -1.12
ATG4B-214ENST00000465399 KRTAP9-6A0A140TA67 174 aa8.08□□□□□ -1.12
ATG4B-214ENST00000465399 TMEM223A0PJW6 202 aa8.08□□□□□ -1.12
ATG4B-214ENST00000465399 PRYO14603 147 aa8.08□□□□□ -1.12
ATG4B-214ENST00000465399 ATP6V1G1O75348 118 aa8.07□□□□□ -1.12
ATG4B-214ENST00000465399 Q8NBF4 154 aa8.07□□□□□ -1.12
ATG4B-214ENST00000465399 H0Y8G0 127 aa8.06□□□□□ -1.12
ATG4B-214ENST00000465399 DAND5Q8N907 189 aa8.06□□□□□ -1.12
ATG4B-214ENST00000465399 FABP4P15090 132 aa8.05□□□□□ -1.12
ATG4B-214ENST00000465399 KRTAP13-3Q3SY46 172 aa8.05□□□□□ -1.12
ATG4B-214ENST00000465399 BOD1L2Q8IYS8 172 aa8.05□□□□□ -1.12
ATG4B-214ENST00000465399 ETDCA0A1B0GVM5 59 aa8.04□□□□□ -1.12
ATG4B-214ENST00000465399 NCR3O14931 201 aa8.04□□□□□ -1.12
ATG4B-214ENST00000465399 LEPROTL1O95214 131 aa8.04□□□□□ -1.12
ATG4B-214ENST00000465399 SPINK1P00995 79 aa8.04□□□□□ -1.12
ATG4B-214ENST00000465399 MEIG1Q5JSS6 88 aa8.04□□□□□ -1.12
ATG4B-214ENST00000465399 SMIM13P0DJ93 91 aa8.03□□□□□ -1.12
ATG4B-214ENST00000465399 SPRR1AP35321 89 aa8.03□□□□□ -1.12
ATG4B-214ENST00000465399 ASB16-AS1Q495Z4 193 aa8.03□□□□□ -1.12
ATG4B-214ENST00000465399 SMCR5Q8TEV8 140 aa8.03□□□□□ -1.12
ATG4B-214ENST00000465399 PMCHL2Q9BQD1 86 aa8.03□□□□□ -1.12
ATG4B-214ENST00000465399 S100A12P80511 92 aa8.02□□□□□ -1.13
ATG4B-214ENST00000465399 KCNQ1DNQ9H478 68 aa8.02□□□□□ -1.13
ATG4B-214ENST00000465399 NDUFA12Q9UI09 145 aa8.02□□□□□ -1.13
ATG4B-214ENST00000465399 HIST1H2BKO60814 126 aa8.01□□□□□ -1.13
ATG4B-214ENST00000465399 HIST1H2BJP06899 126 aa8.01□□□□□ -1.13
ATG4B-214ENST00000465399 HIST1H2BOP23527 126 aa8.01□□□□□ -1.13
ATG4B-214ENST00000465399 HIST1H2BBP33778 126 aa8.01□□□□□ -1.13
ATG4B-214ENST00000465399 HIST1H2BDP58876 126 aa8.01□□□□□ -1.13
ATG4B-214ENST00000465399 HIST1H2BCP62807 126 aa8.01□□□□□ -1.13
ATG4B-214ENST00000465399 HERV-K104P63124 156 aa8.01□□□□□ -1.13
ATG4B-214ENST00000465399 HIST2H2BEQ16778 126 aa8.01□□□□□ -1.13
ATG4B-214ENST00000465399 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.01□□□□□ -1.13
ATG4B-214ENST00000465399 MIR7-3HGQ8N6C7 128 aa8.01□□□□□ -1.13
ATG4B-214ENST00000465399 HIST1H2BHQ93079 126 aa8.01□□□□□ -1.13
ATG4B-214ENST00000465399 HIST1H2BNQ99877 126 aa8.01□□□□□ -1.13
ATG4B-214ENST00000465399 HIST1H2BMQ99879 126 aa8.01□□□□□ -1.13
ATG4B-214ENST00000465399 LINC00587B1AMM8 73 aa8□□□□□ -1.13
ATG4B-214ENST00000465399 KRTAP4-16G5E9R7 235 aaPredicted RBP8□□□□□ -1.13
ATG4B-214ENST00000465399 LINC01547P58512 204 aaPredicted RBP8□□□□□ -1.13
ATG4B-214ENST00000465399 TSPEAR-AS2P59090 65 aa8□□□□□ -1.13
ATG4B-214ENST00000465399 LINC00483Q53H64 154 aa8□□□□□ -1.13
ATG4B-214ENST00000465399 HSPB8Q9UJY1 196 aa8□□□□□ -1.13
ATG4B-214ENST00000465399 TRBV10-3A0A0K0K1G6 114 aa7.99□□□□□ -1.13
ATG4B-214ENST00000465399 SEC61BP60468 96 aaKnown RBP7.99□□□□□ -1.13
ATG4B-214ENST00000465399 GAGE2AQ6NT46 116 aa7.99□□□□□ -1.13
ATG4B-214ENST00000465399 MAP1LC3CQ9BXW4 147 aa7.99□□□□□ -1.13
ATG4B-214ENST00000465399 MOBPQ13875 183 aa7.98□□□□□ -1.13
ATG4B-214ENST00000465399 IGLV9-49A0A0B4J1Y8 123 aa7.97□□□□□ -1.13
ATG4B-214ENST00000465399 RPS29P62273 56 aaKnown RBP7.97□□□□□ -1.13
ATG4B-214ENST00000465399 MYMXA0A1B0GTQ4 84 aa7.96□□□□□ -1.14
ATG4B-214ENST00000465399 B5MCH6 92 aa7.96□□□□□ -1.14
ATG4B-214ENST00000465399 DPM2O94777 84 aa7.96□□□□□ -1.14
ATG4B-214ENST00000465399 LEPROTO15243 131 aa7.95□□□□□ -1.14
ATG4B-214ENST00000465399 IGKCP01834 107 aa7.95□□□□□ -1.14
ATG4B-214ENST00000465399 SSBP3-AS1Q7Z2R9 100 aa7.95□□□□□ -1.14
ATG4B-214ENST00000465399 Q8N377 158 aa7.95□□□□□ -1.14
ATG4B-214ENST00000465399 SLC25A20O43772 301 aa7.94□□□□□ -1.14
ATG4B-214ENST00000465399 PLNP26678 52 aa7.94□□□□□ -1.14
ATG4B-214ENST00000465399 DDTP30046 118 aa7.94□□□□□ -1.14
ATG4B-214ENST00000465399 TRBV10-2A0A0K0K1G8 114 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms