RNA–Protein interactions for RNA: ENST00000464787.1

UBP1-206, Transcript of upstream binding protein 1, humanhuman

TSL 3

Gene UBP1, Length 536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-206ENST00000464787 C2orf88Q9BSF0 95 aa3.3□□□□□ -1.88
UBP1-206ENST00000464787 C6orf48Q9UBA6 75 aa3.3□□□□□ -1.88
UBP1-206ENST00000464787 CDKN2A-AS1Q9UH64 79 aa3.3□□□□□ -1.88
UBP1-206ENST00000464787 LOC107984640A0A0U1RRK4 108 aa3.29□□□□□ -1.88
UBP1-206ENST00000464787 FAM168BA1KXE4 195 aa3.29□□□□□ -1.88
UBP1-206ENST00000464787 LINC00614P0C842 121 aa3.29□□□□□ -1.88
UBP1-206ENST00000464787 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
UBP1-206ENST00000464787 RPL18AQ02543 176 aaKnown RBP3.29□□□□□ -1.88
UBP1-206ENST00000464787 LCE1AQ5T7P2 110 aa3.29□□□□□ -1.88
UBP1-206ENST00000464787 FA2HQ7L5A8 372 aa3.29□□□□□ -1.88
UBP1-206ENST00000464787 KRTAP7-1Q8IUC3 87 aa3.29□□□□□ -1.88
UBP1-206ENST00000464787 CST9LQ9H4G1 147 aa3.29□□□□□ -1.88
UBP1-206ENST00000464787 MRPL35Q9NZE8 188 aaKnown RBP3.29□□□□□ -1.88
UBP1-206ENST00000464787 CHTOPQ9Y3Y2 248 aaKnown RBP3.29□□□□□ -1.88
UBP1-206ENST00000464787 TINCRA0A1B0GVN0 87 aa3.28□□□□□ -1.88
UBP1-206ENST00000464787 NDUFA1O15239 70 aa3.28□□□□□ -1.88
UBP1-206ENST00000464787 G0S2P27469 103 aa3.28□□□□□ -1.88
UBP1-206ENST00000464787 HERVK_113P63121 156 aa3.28□□□□□ -1.88
UBP1-206ENST00000464787 PDZD11Q5EBL8 140 aa3.28□□□□□ -1.88
UBP1-206ENST00000464787 Q8N377 158 aa3.28□□□□□ -1.88
UBP1-206ENST00000464787 SMCO4Q9NRQ5 59 aa3.28□□□□□ -1.88
UBP1-206ENST00000464787 TOMM7Q9P0U1 55 aa3.28□□□□□ -1.88
UBP1-206ENST00000464787 LINC00474Q9P2X8 69 aa3.28□□□□□ -1.88
UBP1-206ENST00000464787 HMCN2Q8NDA2 5059 aa3.28□□□□□ -1.88
UBP1-206ENST00000464787 HBDP02042 147 aa3.27□□□□□ -1.89
UBP1-206ENST00000464787 TRGC2P03986 189 aa3.27□□□□□ -1.89
UBP1-206ENST00000464787 SPINK8P0C7L1 97 aa3.27□□□□□ -1.89
UBP1-206ENST00000464787 TLX1NBP0CAT3 122 aa3.27□□□□□ -1.89
UBP1-206ENST00000464787 PRR3P79522 188 aaKnown RBP3.27□□□□□ -1.89
UBP1-206ENST00000464787 PMVKQ15126 192 aa3.27□□□□□ -1.89
UBP1-206ENST00000464787 C9orf129Q5T035 196 aaKnown RBP3.27□□□□□ -1.89
UBP1-206ENST00000464787 PHF5AQ7RTV0 110 aaKnown RBP3.27□□□□□ -1.89
UBP1-206ENST00000464787 KRTAP11-1Q8IUC1 163 aa3.27□□□□□ -1.89
UBP1-206ENST00000464787 Q8IZM0 81 aa3.27□□□□□ -1.89
UBP1-206ENST00000464787 LINC00469Q8N7U9 141 aa3.27□□□□□ -1.89
UBP1-206ENST00000464787 C7orf33Q8WU49 177 aa3.27□□□□□ -1.89
UBP1-206ENST00000464787 TRBV30A0A0K0K1B3 111 aa3.26□□□□□ -1.89
UBP1-206ENST00000464787 COLCA2A8K830 154 aa3.26□□□□□ -1.89
UBP1-206ENST00000464787 NDUFC2-KCTD14E9PQ53 114 aa3.26□□□□□ -1.89
UBP1-206ENST00000464787 SCO1O75880 301 aa3.26□□□□□ -1.89
UBP1-206ENST00000464787 IGLC3P0DOY3 106 aa3.26□□□□□ -1.89
UBP1-206ENST00000464787 NDUFA6P56556 154 aa3.26□□□□□ -1.89
UBP1-206ENST00000464787 SEC11AP67812 179 aa3.26□□□□□ -1.89
UBP1-206ENST00000464787 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
UBP1-206ENST00000464787 FAM19A2Q8N3H0 131 aa3.26□□□□□ -1.89
UBP1-206ENST00000464787 HIST1H4GQ99525 98 aa3.26□□□□□ -1.89
UBP1-206ENST00000464787 PKIGQ9Y2B9 76 aa3.26□□□□□ -1.89
UBP1-206ENST00000464787 LINC01549A6NIU2 74 aa3.25□□□□□ -1.89
UBP1-206ENST00000464787 C11orf86A6NJI1 115 aa3.25□□□□□ -1.89
UBP1-206ENST00000464787 NUPR1O60356 82 aa3.25□□□□□ -1.89
UBP1-206ENST00000464787 MT1HL1P0DM35 61 aa3.25□□□□□ -1.89
UBP1-206ENST00000464787 ZNF22P17026 224 aaPredicted RBP3.25□□□□□ -1.89
UBP1-206ENST00000464787 RAB5BP61020 215 aa3.25□□□□□ -1.89
UBP1-206ENST00000464787 CKS1BP61024 79 aa3.25□□□□□ -1.89
UBP1-206ENST00000464787 FAM19A5Q7Z5A7 132 aaPredicted RBP3.25□□□□□ -1.89
UBP1-206ENST00000464787 BAGE3Q86Y29 109 aa3.25□□□□□ -1.89
UBP1-206ENST00000464787 COX7B2Q8TF08 81 aa3.25□□□□□ -1.89
UBP1-206ENST00000464787 PACRGQ96M98 296 aaPredicted RBP3.25□□□□□ -1.89
UBP1-206ENST00000464787 XAGE1AQ9HD64 81 aa3.25□□□□□ -1.89
UBP1-206ENST00000464787 PSORS1C2Q9UIG4 136 aa3.25□□□□□ -1.89
UBP1-206ENST00000464787 F8VRH5 84 aa3.24□□□□□ -1.89
UBP1-206ENST00000464787 SERF1AO75920 110 aa3.24□□□□□ -1.89
UBP1-206ENST00000464787 OXTP01178 125 aa3.24□□□□□ -1.89
UBP1-206ENST00000464787 CHCHD1Q96BP2 118 aaKnown RBP3.24□□□□□ -1.89
UBP1-206ENST00000464787 H3BRM9 83 aa3.23□□□□□ -1.89
UBP1-206ENST00000464787 M0QXV9 152 aa3.23□□□□□ -1.89
UBP1-206ENST00000464787 CXCL6P80162 114 aa3.23□□□□□ -1.89
UBP1-206ENST00000464787 IFI27L1Q96BM0 104 aa3.23□□□□□ -1.89
UBP1-206ENST00000464787 UBR4Q5T4S7 5183 aa3.22□□□□□ -1.89
UBP1-206ENST00000464787 IGLV8-61A0A075B6I0 122 aa3.22□□□□□ -1.89
UBP1-206ENST00000464787 TRAV12-1A0A0B4J245 112 aa3.22□□□□□ -1.89
UBP1-206ENST00000464787 HSBP1O75506 76 aa3.22□□□□□ -1.89
UBP1-206ENST00000464787 CXCL5P42830 114 aa3.22□□□□□ -1.89
UBP1-206ENST00000464787 C1orf137Q5JT78 98 aa3.22□□□□□ -1.89
UBP1-206ENST00000464787 TMEM170BQ5T4T1 132 aa3.22□□□□□ -1.89
UBP1-206ENST00000464787 ZNF625Q96I27 306 aaPredicted RBP3.22□□□□□ -1.89
UBP1-206ENST00000464787 C22orf24Q9Y442 160 aa3.22□□□□□ -1.89
UBP1-206ENST00000464787 LRP2P98164 4655 aa3.22□□□□□ -1.89
UBP1-206ENST00000464787 TMEM223A0PJW6 202 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 HIST1H2BKO60814 126 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 LEPROTL1O95214 131 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 IGLV7-43P04211 117 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 HIST1H2BJP06899 126 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 HIST1H2BOP23527 126 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 HIST1H2BBP33778 126 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 PFN2P35080 140 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 HIST1H2BDP58876 126 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 HIST1H2BCP62807 126 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 PRR4Q16378 134 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 HIST2H2BEQ16778 126 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.21□□□□□ -1.9
UBP1-206ENST00000464787 SPINK6Q6UWN8 80 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 Q8NDZ9 215 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 HIST1H2BHQ93079 126 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 LINC01600Q96MT4 127 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 HIST1H2BNQ99877 126 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 HIST1H2BMQ99879 126 aa3.21□□□□□ -1.9
UBP1-206ENST00000464787 FABP4P15090 132 aa3.2□□□□□ -1.9
UBP1-206ENST00000464787 UBE2BP63146 152 aa3.2□□□□□ -1.9
UBP1-206ENST00000464787 PMCHL2Q9BQD1 86 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms