RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 C6orf223Q8N319 242 aa14.57□□□□□ -0.08
PDLIM2-216ENST00000464275 C22orf24Q9Y442 160 aa14.57□□□□□ -0.08
PDLIM2-216ENST00000464275 DNAH10OSP0CZ25 163 aa14.56□□□□□ -0.08
PDLIM2-216ENST00000464275 SDIM1Q6ZPB5 146 aa14.56□□□□□ -0.08
PDLIM2-216ENST00000464275 LINC00643Q86TS7 51 aa14.56□□□□□ -0.08
PDLIM2-216ENST00000464275 NDUFC2O95298 119 aa14.56□□□□□ -0.08
PDLIM2-216ENST00000464275 UNQ6190/PRO20217Q6UXQ8 127 aa14.56□□□□□ -0.08
PDLIM2-216ENST00000464275 MUC7Q8TAX7 377 aa14.56□□□□□ -0.08
PDLIM2-216ENST00000464275 A0A1B0GX51 115 aa14.55□□□□□ -0.08
PDLIM2-216ENST00000464275 C9orf116Q5BN46 136 aaPredicted RBP14.54□□□□□ -0.08
PDLIM2-216ENST00000464275 C10orf25Q5T742 122 aa14.54□□□□□ -0.08
PDLIM2-216ENST00000464275 C1orf43Q9BWL3 253 aa14.54□□□□□ -0.08
PDLIM2-216ENST00000464275 NHLRC4P0CG21 123 aaPredicted RBP14.53□□□□□ -0.08
PDLIM2-216ENST00000464275 LINC00526Q96FQ7 95 aa14.53□□□□□ -0.08
PDLIM2-216ENST00000464275 LINC00588Q9Y4M8 146 aa14.53□□□□□ -0.08
PDLIM2-216ENST00000464275 GVQW2A0A096LPI5 108 aaPredicted RBP14.53□□□□□ -0.08
PDLIM2-216ENST00000464275 A0A087WYN8 130 aa14.52□□□□□ -0.09
PDLIM2-216ENST00000464275 OR13C6PQ8NH95 151 aa14.52□□□□□ -0.09
PDLIM2-216ENST00000464275 Q9HAA7 133 aa14.52□□□□□ -0.09
PDLIM2-216ENST00000464275 MGAM2Q2M2H8 2515 aa14.5□□□□□ -0.09
PDLIM2-216ENST00000464275 OBSCN-AS1Q96MR7 158 aa14.5□□□□□ -0.09
PDLIM2-216ENST00000464275 B9D2Q9BPU9 175 aa14.5□□□□□ -0.09
PDLIM2-216ENST00000464275 ZNF561-AS1K7EIQ3 104 aa14.49□□□□□ -0.09
PDLIM2-216ENST00000464275 IGKV2D-24A0A075B6R9 120 aa14.48□□□□□ -0.09
PDLIM2-216ENST00000464275 LECT2O14960 151 aa14.47□□□□□ -0.09
PDLIM2-216ENST00000464275 C15orf56Q8N910 161 aa14.47□□□□□ -0.09
PDLIM2-216ENST00000464275 TMEM126AQ9H061 195 aa14.47□□□□□ -0.09
PDLIM2-216ENST00000464275 C6orf48Q9UBA6 75 aa14.47□□□□□ -0.09
PDLIM2-216ENST00000464275 HIGD2BQ4VC39 106 aa14.46□□□□□ -0.09
PDLIM2-216ENST00000464275 LINC00167Q96N53 147 aa14.46□□□□□ -0.09
PDLIM2-216ENST00000464275 C2orf48Q96LS8 159 aa14.45□□□□□ -0.1
PDLIM2-216ENST00000464275 CAMK2N2Q96S95 79 aa14.45□□□□□ -0.1
PDLIM2-216ENST00000464275 UPK3BQ9BT76 320 aa14.45□□□□□ -0.1
PDLIM2-216ENST00000464275 ORMDL1Q9P0S3 153 aa14.45□□□□□ -0.1
PDLIM2-216ENST00000464275 GAGE2AQ6NT46 116 aa14.43□□□□□ -0.1
PDLIM2-216ENST00000464275 SMCR5Q8TEV8 140 aa14.43□□□□□ -0.1
PDLIM2-216ENST00000464275 F8WDY8 70 aa14.43□□□□□ -0.1
PDLIM2-216ENST00000464275 PRR3P79522 188 aaKnown RBP14.4□□□□□ -0.1
PDLIM2-216ENST00000464275 DNAH9Q9NYC9 4486 aa14.4□□□□□ -0.1
PDLIM2-216ENST00000464275 Q6ZRU5 148 aa14.38□□□□□ -0.11
PDLIM2-216ENST00000464275 RMI2Q96E14 147 aa14.38□□□□□ -0.11
PDLIM2-216ENST00000464275 JMJD7-PLA2G4BH0Y9G9 81 aa14.38□□□□□ -0.11
PDLIM2-216ENST00000464275 Q8NDZ9 215 aa14.38□□□□□ -0.11
PDLIM2-216ENST00000464275 Q8N814 137 aa14.36□□□□□ -0.11
PDLIM2-216ENST00000464275 TMEM256-PLSCR3K7ERE1 68 aa14.36□□□□□ -0.11
PDLIM2-216ENST00000464275 NCR3O14931 201 aa14.36□□□□□ -0.11
PDLIM2-216ENST00000464275 C14orf132Q9NPU4 83 aa14.36□□□□□ -0.11
PDLIM2-216ENST00000464275 FAM236AA0A1B0GUQ0 79 aa14.34□□□□□ -0.11
PDLIM2-216ENST00000464275 FAM236BA0A1B0GV22 79 aa14.34□□□□□ -0.11
PDLIM2-216ENST00000464275 B5MCH6 92 aa14.33□□□□□ -0.12
PDLIM2-216ENST00000464275 CCDC179H3BU77 68 aa14.33□□□□□ -0.12
PDLIM2-216ENST00000464275 SYCNQ0VAF6 134 aa14.33□□□□□ -0.12
PDLIM2-216ENST00000464275 S100A7L2Q5SY68 101 aa14.33□□□□□ -0.12
PDLIM2-216ENST00000464275 APLNQ9ULZ1 77 aa14.33□□□□□ -0.12
PDLIM2-216ENST00000464275 DNHD1Q96M86 4753 aa14.31□□□□□ -0.12
PDLIM2-216ENST00000464275 NDUFC2-KCTD14E9PQ53 114 aa14.31□□□□□ -0.12
PDLIM2-216ENST00000464275 Q6JHZ5 121 aa14.31□□□□□ -0.12
PDLIM2-216ENST00000464275 XAGE1AQ9HD64 81 aa14.31□□□□□ -0.12
PDLIM2-216ENST00000464275 C9orf129Q5T035 196 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-216ENST00000464275 H3BQ85 93 aa14.29□□□□□ -0.12
PDLIM2-216ENST00000464275 SLPIP03973 132 aa14.29□□□□□ -0.12
PDLIM2-216ENST00000464275 CCKP06307 115 aa14.29□□□□□ -0.12
PDLIM2-216ENST00000464275 RPL18AQ02543 176 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-216ENST00000464275 COL7A1Q02388 2944 aa14.28□□□□□ -0.12
PDLIM2-216ENST00000464275 USP17L23D6RBM5 183 aa14.27□□□□□ -0.12
PDLIM2-216ENST00000464275 C6orf99Q4VX62 202 aa14.27□□□□□ -0.12
PDLIM2-216ENST00000464275 IGLV6-57P01721 117 aa14.27□□□□□ -0.13
PDLIM2-216ENST00000464275 UBE2DNLQ8IWF7 75 aa14.27□□□□□ -0.13
PDLIM2-216ENST00000464275 LINC00575Q6W349 94 aa14.26□□□□□ -0.13
PDLIM2-216ENST00000464275 CASC10Q5T4H9 136 aa14.25□□□□□ -0.13
PDLIM2-216ENST00000464275 LINC00846Q9NV44 126 aa14.25□□□□□ -0.13
PDLIM2-216ENST00000464275 HIST1H4AP62805 103 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-216ENST00000464275 VPREB1P12018 145 aa14.23□□□□□ -0.13
PDLIM2-216ENST00000464275 NUPR2A6NF83 97 aa14.23□□□□□ -0.13
PDLIM2-216ENST00000464275 Q6ZRP5 223 aa14.23□□□□□ -0.13
PDLIM2-216ENST00000464275 DNAH1Q9P2D7 4330 aa14.23□□□□□ -0.13
PDLIM2-216ENST00000464275 ATP5EP2Q5VTU8 51 aa14.22□□□□□ -0.13
PDLIM2-216ENST00000464275 DYNC2H1Q8NCM8 4307 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-216ENST00000464275 ATOX1O00244 68 aa14.22□□□□□ -0.13
PDLIM2-216ENST00000464275 TLX1NBP0CAT3 122 aa14.22□□□□□ -0.13
PDLIM2-216ENST00000464275 STAB2Q8WWQ8 2551 aa14.21□□□□□ -0.13
PDLIM2-216ENST00000464275 hADV29S1A0JD25 119 aa14.2□□□□□ -0.14
PDLIM2-216ENST00000464275 UQCRQO14949 82 aa14.2□□□□□ -0.14
PDLIM2-216ENST00000464275 SS18L2Q9UHA2 77 aa14.2□□□□□ -0.14
PDLIM2-216ENST00000464275 TRBV10-3A0A0K0K1G6 114 aa14.2□□□□□ -0.14
PDLIM2-216ENST00000464275 M0R378 163 aa14.19□□□□□ -0.14
PDLIM2-216ENST00000464275 GHRHP01286 108 aa14.18□□□□□ -0.14
PDLIM2-216ENST00000464275 C3orf22Q8N5N4 141 aa14.18□□□□□ -0.14
PDLIM2-216ENST00000464275 KRTAP1-5Q9BYS1 174 aa14.18□□□□□ -0.14
PDLIM2-216ENST00000464275 TRAV23DV6A0A075B6W5 121 aa14.17□□□□□ -0.14
PDLIM2-216ENST00000464275 TRBV7-6A0A0J9YX20 115 aa14.16□□□□□ -0.14
PDLIM2-216ENST00000464275 KRTAP21-3Q3LHN1 58 aa14.15□□□□□ -0.14
PDLIM2-216ENST00000464275 LOC110117498A0A087WWA1 95 aa14.14□□□□□ -0.15
PDLIM2-216ENST00000464275 PDE6GP18545 87 aa14.14□□□□□ -0.15
PDLIM2-216ENST00000464275 DIRC1Q969H9 104 aa14.14□□□□□ -0.15
PDLIM2-216ENST00000464275 COX7CP15954 63 aa14.13□□□□□ -0.15
PDLIM2-216ENST00000464275 RBM3P98179 157 aaKnown RBP14.13□□□□□ -0.15
PDLIM2-216ENST00000464275 PLA2G2DQ9UNK4 145 aa14.12□□□□□ -0.15
PDLIM2-216ENST00000464275 IGKV3D-7A0A0C4DH55 119 aa14.11□□□□□ -0.15
PDLIM2-216ENST00000464275 UBL5Q9BZL1 73 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms