RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 SFTA2Q6UW10 78 aa9.75□□□□□ -0.85
HMGN1-209ENST00000463631 ZNF22P17026 224 aaPredicted RBP9.74□□□□□ -0.85
HMGN1-209ENST00000463631 KRTAP4-1Q9BYQ7 146 aa9.74□□□□□ -0.85
HMGN1-209ENST00000463631 SEC61BP60468 96 aaKnown RBP9.73□□□□□ -0.85
HMGN1-209ENST00000463631 Q8NBF4 154 aa9.73□□□□□ -0.85
HMGN1-209ENST00000463631 A0A1B0GVG6 124 aa9.72□□□□□ -0.85
HMGN1-209ENST00000463631 SPINK1P00995 79 aa9.72□□□□□ -0.85
HMGN1-209ENST00000463631 FA2HQ7L5A8 372 aa9.71□□□□□ -0.86
HMGN1-209ENST00000463631 ZNF625Q96I27 306 aaPredicted RBP9.71□□□□□ -0.86
HMGN1-209ENST00000463631 DAND5Q8N907 189 aa9.7□□□□□ -0.86
HMGN1-209ENST00000463631 SMCO4Q9NRQ5 59 aa9.7□□□□□ -0.86
HMGN1-209ENST00000463631 CRCT1Q9UGL9 99 aa9.7□□□□□ -0.86
HMGN1-209ENST00000463631 A0A096LNJ9 63 aa9.68□□□□□ -0.86
HMGN1-209ENST00000463631 PRYO14603 147 aa9.68□□□□□ -0.86
HMGN1-209ENST00000463631 RPS29P62273 56 aaKnown RBP9.68□□□□□ -0.86
HMGN1-209ENST00000463631 FSIP2Q5CZC0 6907 aa9.67□□□□□ -0.86
HMGN1-209ENST00000463631 SPRR1AP35321 89 aa9.67□□□□□ -0.86
HMGN1-209ENST00000463631 LINC00483Q53H64 154 aa9.67□□□□□ -0.86
HMGN1-209ENST00000463631 FAM19A2Q8N3H0 131 aa9.67□□□□□ -0.86
HMGN1-209ENST00000463631 COX19Q49B96 90 aa9.66□□□□□ -0.86
HMGN1-209ENST00000463631 NDUFA12Q9UI09 145 aa9.66□□□□□ -0.86
HMGN1-209ENST00000463631 C11orf86A6NJI1 115 aa9.65□□□□□ -0.86
HMGN1-209ENST00000463631 KRTAP4-16G5E9R7 235 aaPredicted RBP9.65□□□□□ -0.86
HMGN1-209ENST00000463631 NDUFA6P56556 154 aa9.65□□□□□ -0.86
HMGN1-209ENST00000463631 LINC00158P58513 81 aa9.64□□□□□ -0.87
HMGN1-209ENST00000463631 KCNQ1DNQ9H478 68 aa9.64□□□□□ -0.87
HMGN1-209ENST00000463631 S100PP25815 95 aa9.63□□□□□ -0.87
HMGN1-209ENST00000463631 XP32Q5T750 250 aa9.63□□□□□ -0.87
HMGN1-209ENST00000463631 Q8N377 158 aa9.63□□□□□ -0.87
HMGN1-209ENST00000463631 SMCR5Q8TEV8 140 aa9.63□□□□□ -0.87
HMGN1-209ENST00000463631 TMEM170BQ5T4T1 132 aa9.62□□□□□ -0.87
HMGN1-209ENST00000463631 HBDP02042 147 aa9.61□□□□□ -0.87
HMGN1-209ENST00000463631 LCE2CQ5TA81 110 aa9.61□□□□□ -0.87
HMGN1-209ENST00000463631 ETDCA0A1B0GVM5 59 aa9.6□□□□□ -0.87
HMGN1-209ENST00000463631 FABP9Q0Z7S8 132 aa9.6□□□□□ -0.87
HMGN1-209ENST00000463631 URB1-AS1Q96HZ7 61 aa9.6□□□□□ -0.87
HMGN1-209ENST00000463631 SLC25A20O43772 301 aa9.59□□□□□ -0.87
HMGN1-209ENST00000463631 BAGE3Q86Y29 109 aa9.59□□□□□ -0.87
HMGN1-209ENST00000463631 BOD1L2Q8IYS8 172 aa9.59□□□□□ -0.87
HMGN1-209ENST00000463631 A0A0U1RRA0 63 aa9.58□□□□□ -0.88
HMGN1-209ENST00000463631 MOBPQ13875 183 aa9.58□□□□□ -0.88
HMGN1-209ENST00000463631 SSBP3-AS1Q7Z2R9 100 aa9.58□□□□□ -0.88
HMGN1-209ENST00000463631 TMEM218A2RU14 115 aa9.57□□□□□ -0.88
HMGN1-209ENST00000463631 NCR3O14931 201 aa9.57□□□□□ -0.88
HMGN1-209ENST00000463631 CLLU1Q5K131 121 aa9.57□□□□□ -0.88
HMGN1-209ENST00000463631 GAGE2AQ6NT46 116 aa9.57□□□□□ -0.88
HMGN1-209ENST00000463631 UQCC3Q6UW78 93 aa9.57□□□□□ -0.88
HMGN1-209ENST00000463631 C18orf32Q8TCD1 76 aa9.57□□□□□ -0.88
HMGN1-209ENST00000463631 SEC11CQ9BY50 192 aa9.57□□□□□ -0.88
HMGN1-209ENST00000463631 TRBV10-3A0A0K0K1G6 114 aa9.56□□□□□ -0.88
HMGN1-209ENST00000463631 LINC00614P0C842 121 aa9.56□□□□□ -0.88
HMGN1-209ENST00000463631 SMIM13P0DJ93 91 aa9.56□□□□□ -0.88
HMGN1-209ENST00000463631 IGLV9-49A0A0B4J1Y8 123 aa9.55□□□□□ -0.88
HMGN1-209ENST00000463631 TMEM223A0PJW6 202 aa9.55□□□□□ -0.88
HMGN1-209ENST00000463631 PMCHL1Q16048 86 aa9.55□□□□□ -0.88
HMGN1-209ENST00000463631 KRTAP19-2Q3LHN2 52 aa9.55□□□□□ -0.88
HMGN1-209ENST00000463631 MIR7-3HGQ8N6C7 128 aa9.55□□□□□ -0.88
HMGN1-209ENST00000463631 B5MCH6 92 aa9.54□□□□□ -0.88
HMGN1-209ENST00000463631 ATP6V1G1O75348 118 aa9.54□□□□□ -0.88
HMGN1-209ENST00000463631 CHTOPQ9Y3Y2 248 aaKnown RBP9.54□□□□□ -0.88
HMGN1-209ENST00000463631 ERC2-IT1O76042 136 aa9.53□□□□□ -0.88
HMGN1-209ENST00000463631 S100A12P80511 92 aa9.53□□□□□ -0.88
HMGN1-209ENST00000463631 HERV-K104P63124 156 aa9.52□□□□□ -0.89
HMGN1-209ENST00000463631 MEIG1Q5JSS6 88 aa9.52□□□□□ -0.89
HMGN1-209ENST00000463631 LINC00587B1AMM8 73 aa9.51□□□□□ -0.89
HMGN1-209ENST00000463631 Q6ZRX8 168 aa9.51□□□□□ -0.89
HMGN1-209ENST00000463631 Q9BRP9 147 aa9.51□□□□□ -0.89
HMGN1-209ENST00000463631 TRAV12-1A0A0B4J245 112 aa9.5□□□□□ -0.89
HMGN1-209ENST00000463631 CFC1BP0CG36 223 aa9.5□□□□□ -0.89
HMGN1-209ENST00000463631 MT1HP80294 61 aa9.5□□□□□ -0.89
HMGN1-209ENST00000463631 LOC107984156A0A0G2JMH3 177 aa9.48□□□□□ -0.89
HMGN1-209ENST00000463631 TRBV10-2A0A0K0K1G8 114 aa9.48□□□□□ -0.89
HMGN1-209ENST00000463631 ARL17AQ8IVW1 177 aa9.48□□□□□ -0.89
HMGN1-209ENST00000463631 MAP1LC3CQ9BXW4 147 aa9.48□□□□□ -0.89
HMGN1-209ENST00000463631 RHEBQ15382 184 aa9.47□□□□□ -0.89
HMGN1-209ENST00000463631 TRAPPC1Q9Y5R8 145 aa9.47□□□□□ -0.89
HMGN1-209ENST00000463631 DDTP30046 118 aa9.46□□□□□ -0.9
HMGN1-209ENST00000463631 MYMXA0A1B0GTQ4 84 aa9.44□□□□□ -0.9
HMGN1-209ENST00000463631 C10orf91Q5T1B1 145 aa9.44□□□□□ -0.9
HMGN1-209ENST00000463631 IFI27L1Q96BM0 104 aa9.44□□□□□ -0.9
HMGN1-209ENST00000463631 C9orf153Q5TBE3 101 aa9.43□□□□□ -0.9
HMGN1-209ENST00000463631 RPS10P5Q9NQ39 176 aa9.43□□□□□ -0.9
HMGN1-209ENST00000463631 SPANXB1Q9NS25 103 aaPredicted RBP9.43□□□□□ -0.9
HMGN1-209ENST00000463631 LORP23490 312 aaPredicted RBP9.42□□□□□ -0.9
HMGN1-209ENST00000463631 IGLV6-57P01721 117 aa9.41□□□□□ -0.9
HMGN1-209ENST00000463631 JOSD1Q15040 202 aaPredicted RBP9.41□□□□□ -0.9
HMGN1-209ENST00000463631 PCOTHQ58A44 107 aa9.41□□□□□ -0.9
HMGN1-209ENST00000463631 CHCHD1Q96BP2 118 aaKnown RBP9.41□□□□□ -0.9
HMGN1-209ENST00000463631 IGLV8-61A0A075B6I0 122 aa9.4□□□□□ -0.9
HMGN1-209ENST00000463631 C5orf52A6NGY3 159 aa9.4□□□□□ -0.9
HMGN1-209ENST00000463631 NDUFC2O95298 119 aa9.39□□□□□ -0.91
HMGN1-209ENST00000463631 TSPEAR-AS2P59090 65 aa9.39□□□□□ -0.91
HMGN1-209ENST00000463631 LIMD2Q9BT23 127 aa9.39□□□□□ -0.91
HMGN1-209ENST00000463631 TRAV23DV6A0A075B6W5 121 aa9.37□□□□□ -0.91
HMGN1-209ENST00000463631 KRTAP10-6P60371 365 aaPredicted RBP9.37□□□□□ -0.91
HMGN1-209ENST00000463631 IFITM2Q01629 132 aa9.37□□□□□ -0.91
HMGN1-209ENST00000463631 MIEN1Q9BRT3 115 aa9.37□□□□□ -0.91
HMGN1-209ENST00000463631 S100A7L2Q5SY68 101 aa9.36□□□□□ -0.91
HMGN1-209ENST00000463631 ZNF73O43830 326 aaPredicted RBP9.35□□□□□ -0.91
HMGN1-209ENST00000463631 ST20-AS1Q8NBB2 130 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms