RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	C22orf24	Q9Y442	160 aa		6.55	□□□□□ -1.36
PTPN7-204	ENST00000462815	IGLV5-45	A0A087WSX0	123 aa		6.54	□□□□□ -1.36
PTPN7-204	ENST00000462815	C11orf86	A6NJI1	115 aa		6.54	□□□□□ -1.36
PTPN7-204	ENST00000462815	LINC00469	Q8N7U9	141 aa		6.54	□□□□□ -1.36
PTPN7-204	ENST00000462815	SEC11A	P67812	179 aa		6.53	□□□□□ -1.36
PTPN7-204	ENST00000462815	JOSD1	Q15040	202 aa	Predicted RBP	6.53	□□□□□ -1.36
PTPN7-204	ENST00000462815	DPM2	O94777	84 aa		6.52	□□□□□ -1.37
PTPN7-204	ENST00000462815	ZNF22	P17026	224 aa	Predicted RBP	6.52	□□□□□ -1.37
PTPN7-204	ENST00000462815	HERVK_113	P63121	156 aa		6.52	□□□□□ -1.37
PTPN7-204	ENST00000462815	KRTAP13-2	Q52LG2	175 aa		6.52	□□□□□ -1.37
PTPN7-204	ENST00000462815	KRTAP13-1	Q8IUC0	172 aa		6.52	□□□□□ -1.37
PTPN7-204	ENST00000462815		Q8IZM0	81 aa		6.52	□□□□□ -1.37
PTPN7-204	ENST00000462815	XAGE1A	Q9HD64	81 aa		6.52	□□□□□ -1.37
PTPN7-204	ENST00000462815	TP73-AS1	Q9UF72	201 aa		6.52	□□□□□ -1.37
PTPN7-204	ENST00000462815	CDKN2A-AS1	Q9UH64	79 aa		6.52	□□□□□ -1.37
PTPN7-204	ENST00000462815	BCE1	O60756	84 aa		6.51	□□□□□ -1.37
PTPN7-204	ENST00000462815	IGKC	P01834	107 aa		6.51	□□□□□ -1.37
PTPN7-204	ENST00000462815	PYY3	Q5JQD4	70 aa		6.51	□□□□□ -1.37
PTPN7-204	ENST00000462815	GEMIN7	Q9H840	131 aa	Known RBP	6.51	□□□□□ -1.37
PTPN7-204	ENST00000462815	SCGB1D1	O95968	90 aa		6.5	□□□□□ -1.37
PTPN7-204	ENST00000462815	PLN	P26678	52 aa		6.5	□□□□□ -1.37
PTPN7-204	ENST00000462815	MRPL55	Q7Z7F7	128 aa	Known RBP	6.5	□□□□□ -1.37
PTPN7-204	ENST00000462815	TMEM223	A0PJW6	202 aa		6.49	□□□□□ -1.37
PTPN7-204	ENST00000462815	C20orf202	A1L168	122 aa		6.49	□□□□□ -1.37
PTPN7-204	ENST00000462815	AKR1D1	P51857	326 aa		6.49	□□□□□ -1.37
PTPN7-204	ENST00000462815	LBH	Q53QV2	105 aa	Predicted RBP	6.49	□□□□□ -1.37
PTPN7-204	ENST00000462815	ATOH7	Q8N100	152 aa		6.49	□□□□□ -1.37
PTPN7-204	ENST00000462815	ANAPC11	Q9NYG5	84 aa		6.49	□□□□□ -1.37
PTPN7-204	ENST00000462815	CRYGA	P11844	174 aa		6.48	□□□□□ -1.37
PTPN7-204	ENST00000462815	RPL28	P46779	137 aa	Known RBP	6.48	□□□□□ -1.37
PTPN7-204	ENST00000462815	TMEM170B	Q5T4T1	132 aa		6.48	□□□□□ -1.37
PTPN7-204	ENST00000462815	TYMSOS	Q8TAI1	123 aa		6.48	□□□□□ -1.37
PTPN7-204	ENST00000462815	LINC00167	Q96N53	147 aa		6.48	□□□□□ -1.37
PTPN7-204	ENST00000462815	TOMM7	Q9P0U1	55 aa		6.48	□□□□□ -1.37
PTPN7-204	ENST00000462815	IGLV5-39	A0A0G2JS06	123 aa		6.47	□□□□□ -1.37
PTPN7-204	ENST00000462815	SMIM1	B2RUZ4	78 aa		6.47	□□□□□ -1.37
PTPN7-204	ENST00000462815		H3BRM9	83 aa		6.47	□□□□□ -1.37
PTPN7-204	ENST00000462815	PRSS2	P07478	247 aa		6.47	□□□□□ -1.37
PTPN7-204	ENST00000462815	SPINK8	P0C7L1	97 aa		6.47	□□□□□ -1.37
PTPN7-204	ENST00000462815	CKS1B	P61024	79 aa		6.47	□□□□□ -1.37
PTPN7-204	ENST00000462815	C6orf226	Q5I0X4	101 aa		6.47	□□□□□ -1.37
PTPN7-204	ENST00000462815	RETNLB	Q9BQ08	111 aa		6.47	□□□□□ -1.37
PTPN7-204	ENST00000462815	IGLV5-37	A0A075B6J1	123 aa		6.46	□□□□□ -1.38
PTPN7-204	ENST00000462815	TPRXL	Q17RH7	258 aa		6.46	□□□□□ -1.38
PTPN7-204	ENST00000462815	ANKRD39	Q53RE8	183 aa		6.46	□□□□□ -1.38
PTPN7-204	ENST00000462815	RPL37AP8	A6NKH3	93 aa		6.45	□□□□□ -1.38
PTPN7-204	ENST00000462815	IGKV2D-26	A0A0A0MRZ7	120 aa		6.44	□□□□□ -1.38
PTPN7-204	ENST00000462815		E9PLD3	99 aa		6.44	□□□□□ -1.38
PTPN7-204	ENST00000462815	LEPROT	O15243	131 aa		6.44	□□□□□ -1.38
PTPN7-204	ENST00000462815	FAM229B	Q4G0N7	80 aa		6.44	□□□□□ -1.38
PTPN7-204	ENST00000462815	CXCL5	P42830	114 aa		6.43	□□□□□ -1.38
PTPN7-204	ENST00000462815	TSPEAR-AS2	P59090	65 aa		6.43	□□□□□ -1.38
PTPN7-204	ENST00000462815	COX7B2	Q8TF08	81 aa		6.43	□□□□□ -1.38
PTPN7-204	ENST00000462815	GAGE10	A6NGK3	116 aa		6.42	□□□□□ -1.38
PTPN7-204	ENST00000462815	SMIM6	P0DI80	62 aa		6.42	□□□□□ -1.38
PTPN7-204	ENST00000462815	HERVK_113	P61574	105 aa		6.42	□□□□□ -1.38
PTPN7-204	ENST00000462815	LINC00304	Q8N9R0	145 aa		6.42	□□□□□ -1.38
PTPN7-204	ENST00000462815	PLEKHB2	Q96CS7	222 aa		6.42	□□□□□ -1.38
PTPN7-204	ENST00000462815	CDIP1	Q9H305	208 aa		6.42	□□□□□ -1.38
PTPN7-204	ENST00000462815		J3QQQ9	107 aa		6.41	□□□□□ -1.38
PTPN7-204	ENST00000462815	HSBP1L1	C9JCN9	74 aa		6.4	□□□□□ -1.38
PTPN7-204	ENST00000462815	CTAG1A	P78358	180 aa		6.4	□□□□□ -1.38
PTPN7-204	ENST00000462815	SPATA45	Q537H7	98 aa		6.4	□□□□□ -1.38
PTPN7-204	ENST00000462815	ZNF625	Q96I27	306 aa	Predicted RBP	6.4	□□□□□ -1.38
PTPN7-204	ENST00000462815	VAMP8	Q9BV40	100 aa		6.4	□□□□□ -1.38
PTPN7-204	ENST00000462815	TTTY13	Q9BZ97	58 aa		6.4	□□□□□ -1.38
PTPN7-204	ENST00000462815	PAM16	Q9Y3D7	125 aa		6.4	□□□□□ -1.38
PTPN7-204	ENST00000462815	PCP2	Q8IVA1	136 aa		6.39	□□□□□ -1.39
PTPN7-204	ENST00000462815	LINC00518	Q8N0U6	118 aa		6.39	□□□□□ -1.39
PTPN7-204	ENST00000462815		Q8NDZ9	215 aa		6.39	□□□□□ -1.39
PTPN7-204	ENST00000462815	IGLV7-46	A0A075B6I9	117 aa		6.38	□□□□□ -1.39
PTPN7-204	ENST00000462815	IGKV2-28	A0A075B6P5	120 aa		6.38	□□□□□ -1.39
PTPN7-204	ENST00000462815	IGKV2D-28	P01615	120 aa		6.38	□□□□□ -1.39
PTPN7-204	ENST00000462815	VPREB1	P12018	145 aa		6.38	□□□□□ -1.39
PTPN7-204	ENST00000462815	LGALS3	P17931	250 aa	Known RBP	6.38	□□□□□ -1.39
PTPN7-204	ENST00000462815	NMU	P48645	174 aa		6.38	□□□□□ -1.39
PTPN7-204	ENST00000462815	UBE2A	P49459	152 aa		6.38	□□□□□ -1.39
PTPN7-204	ENST00000462815	NDUFA12	Q9UI09	145 aa		6.38	□□□□□ -1.39
PTPN7-204	ENST00000462815	COX8A	P10176	69 aa		6.37	□□□□□ -1.39
PTPN7-204	ENST00000462815	PRLH	P81277	87 aa		6.37	□□□□□ -1.39
PTPN7-204	ENST00000462815	BOD1L2	Q8IYS8	172 aa		6.37	□□□□□ -1.39
PTPN7-204	ENST00000462815	C3orf22	Q8N5N4	141 aa		6.37	□□□□□ -1.39
PTPN7-204	ENST00000462815	C12orf57	Q99622	126 aa		6.37	□□□□□ -1.39
PTPN7-204	ENST00000462815	TMEM126A	Q9H061	195 aa		6.37	□□□□□ -1.39
PTPN7-204	ENST00000462815	FSIP2	Q5CZC0	6907 aa		6.36	□□□□□ -1.39
PTPN7-204	ENST00000462815	MYMX	A0A1B0GTQ4	84 aa		6.36	□□□□□ -1.39
PTPN7-204	ENST00000462815	TMEM238	C9JI98	176 aa		6.36	□□□□□ -1.39
PTPN7-204	ENST00000462815		M0R378	163 aa		6.36	□□□□□ -1.39
PTPN7-204	ENST00000462815	DLEU1	O43261	78 aa		6.36	□□□□□ -1.39
PTPN7-204	ENST00000462815	S100A12	P80511	92 aa		6.36	□□□□□ -1.39
PTPN7-204	ENST00000462815	NKAPP1	Q8N9T2	125 aa		6.36	□□□□□ -1.39
PTPN7-204	ENST00000462815	C14orf144	Q96I85	54 aa		6.36	□□□□□ -1.39
PTPN7-204	ENST00000462815		A0A0J9YXY3	114 aa		6.35	□□□□□ -1.39
PTPN7-204	ENST00000462815	ZNF815P	A8K554	130 aa		6.35	□□□□□ -1.39
PTPN7-204	ENST00000462815	SFTA2	Q6UW10	78 aa		6.35	□□□□□ -1.39
PTPN7-204	ENST00000462815	KRTAP4-1	Q9BYQ7	146 aa		6.35	□□□□□ -1.39
PTPN7-204	ENST00000462815	PPDPF	Q9H3Y8	114 aa		6.35	□□□□□ -1.39
PTPN7-204	ENST00000462815	HERV-K104	P63124	156 aa		6.34	□□□□□ -1.39
PTPN7-204	ENST00000462815	KRTAP13-3	Q3SY46	172 aa		6.33	□□□□□ -1.4
PTPN7-204	ENST00000462815	FAM19A1	Q7Z5A9	133 aa		6.33	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms