RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 Q6ZTC4 211 aa10.78□□□□□ -0.68
SMC4-204ENST00000462787 ZNF575Q86XF7 245 aa10.78□□□□□ -0.68
SMC4-204ENST00000462787 MUC4Q99102 2169 aa10.77□□□□□ -0.68
SMC4-204ENST00000462787 IL17DQ8TAD2 202 aa10.77□□□□□ -0.69
SMC4-204ENST00000462787 MYO18BQ8IUG5 2567 aa10.76□□□□□ -0.69
SMC4-204ENST00000462787 LINC00167Q96N53 147 aa10.75□□□□□ -0.69
SMC4-204ENST00000462787 Q6ZRX8 168 aa10.75□□□□□ -0.69
SMC4-204ENST00000462787 CYP4F30PQ9H0H9 118 aa10.75□□□□□ -0.69
SMC4-204ENST00000462787 OBSCN-AS1Q96MR7 158 aa10.75□□□□□ -0.69
SMC4-204ENST00000462787 PRLHP81277 87 aa10.73□□□□□ -0.69
SMC4-204ENST00000462787 C9orf129Q5T035 196 aaKnown RBP10.73□□□□□ -0.69
SMC4-204ENST00000462787 A8MUN3 132 aa10.72□□□□□ -0.69
SMC4-204ENST00000462787 TRBV7-4A0A0J9YYF1 115 aa10.72□□□□□ -0.69
SMC4-204ENST00000462787 FN1P02751 2386 aaKnown RBP10.71□□□□□ -0.69
SMC4-204ENST00000462787 LINC00476Q8WZB0 136 aa10.71□□□□□ -0.69
SMC4-204ENST00000462787 PIEZO1Q92508 2521 aa10.71□□□□□ -0.69
SMC4-204ENST00000462787 VPREB1P12018 145 aa10.71□□□□□ -0.7
SMC4-204ENST00000462787 LINC01556Q5JQF7 62 aa10.71□□□□□ -0.7
SMC4-204ENST00000462787 USP9XQ93008 2570 aaPredicted RBP10.71□□□□□ -0.7
SMC4-204ENST00000462787 TRAV22A0A0B4J277 110 aa10.7□□□□□ -0.7
SMC4-204ENST00000462787 KRTAP10-9P60411 292 aa10.7□□□□□ -0.7
SMC4-204ENST00000462787 X6R8D5 127 aa10.7□□□□□ -0.7
SMC4-204ENST00000462787 SPAG11AQ6PDA7 123 aa10.7□□□□□ -0.7
SMC4-204ENST00000462787 CD164Q04900 197 aa10.69□□□□□ -0.7
SMC4-204ENST00000462787 ABCA2Q9BZC7 2435 aa10.68□□□□□ -0.7
SMC4-204ENST00000462787 LINC00528Q8N1L1 170 aa10.67□□□□□ -0.7
SMC4-204ENST00000462787 H3BNG1 76 aa10.66□□□□□ -0.7
SMC4-204ENST00000462787 OXLD1Q5BKU9 147 aa10.66□□□□□ -0.7
SMC4-204ENST00000462787 ACYP2P14621 99 aa10.66□□□□□ -0.7
SMC4-204ENST00000462787 A0A1B0GU69 56 aa10.65□□□□□ -0.7
SMC4-204ENST00000462787 K7EQZ3 153 aa10.65□□□□□ -0.7
SMC4-204ENST00000462787 BPTFQ12830 3046 aa10.64□□□□□ -0.71
SMC4-204ENST00000462787 FSHBP01225 129 aa10.64□□□□□ -0.71
SMC4-204ENST00000462787 ST20-AS1Q8NBB2 130 aa10.63□□□□□ -0.71
SMC4-204ENST00000462787 NCOR2Q9Y618 2525 aa10.63□□□□□ -0.71
SMC4-204ENST00000462787 CIRBP-AS1Q8TBR5 109 aa10.61□□□□□ -0.71
SMC4-204ENST00000462787 USP9YO00507 2555 aaPredicted RBP10.61□□□□□ -0.71
SMC4-204ENST00000462787 KCNQ1DNQ9H478 68 aa10.6□□□□□ -0.71
SMC4-204ENST00000462787 COA5Q86WW8 74 aa10.6□□□□□ -0.71
SMC4-204ENST00000462787 ATP11AUNQ6ZP68 121 aa10.6□□□□□ -0.71
SMC4-204ENST00000462787 C8orf87E5RJ46 101 aa10.59□□□□□ -0.71
SMC4-204ENST00000462787 Q6ZRP5 223 aa10.58□□□□□ -0.72
SMC4-204ENST00000462787 A8MWP4 228 aa10.58□□□□□ -0.72
SMC4-204ENST00000462787 SERTAD4-AS1Q5TG53 156 aa10.58□□□□□ -0.72
SMC4-204ENST00000462787 PRR15Q8IV56 129 aa10.58□□□□□ -0.72
SMC4-204ENST00000462787 TLN2Q9Y4G6 2542 aa10.57□□□□□ -0.72
SMC4-204ENST00000462787 LOC101927531A0A1B0GV80 90 aa10.57□□□□□ -0.72
SMC4-204ENST00000462787 Q5XG85 94 aa10.57□□□□□ -0.72
SMC4-204ENST00000462787 RPL37AP61513 92 aaKnown RBP10.57□□□□□ -0.72
SMC4-204ENST00000462787 CSNK1G2-AS1Q8NCQ2 148 aa10.56□□□□□ -0.72
SMC4-204ENST00000462787 KTN1-AS1Q86SY8 53 aa10.56□□□□□ -0.72
SMC4-204ENST00000462787 ABCA12Q86UK0 2595 aa10.56□□□□□ -0.72
SMC4-204ENST00000462787 GOLGB1Q14789 3259 aaKnown RBP10.55□□□□□ -0.72
SMC4-204ENST00000462787 MOBPQ13875 183 aa10.55□□□□□ -0.72
SMC4-204ENST00000462787 RETNLBQ9BQ08 111 aa10.54□□□□□ -0.72
SMC4-204ENST00000462787 SETD2Q9BYW2 2564 aaPredicted RBP10.53□□□□□ -0.72
SMC4-204ENST00000462787 M0R2N4 97 aa10.53□□□□□ -0.72
SMC4-204ENST00000462787 FAM104AQ969W3 186 aa10.53□□□□□ -0.72
SMC4-204ENST00000462787 Q8N377 158 aa10.52□□□□□ -0.72
SMC4-204ENST00000462787 PRR34Q9NV39 138 aa10.52□□□□□ -0.73
SMC4-204ENST00000462787 Q8NAQ8 132 aa10.52□□□□□ -0.73
SMC4-204ENST00000462787 SPINK1P00995 79 aa10.52□□□□□ -0.73
SMC4-204ENST00000462787 PKD1L2Q7Z442 2459 aa10.51□□□□□ -0.73
SMC4-204ENST00000462787 CEP295Q9C0D2 2601 aa10.51□□□□□ -0.73
SMC4-204ENST00000462787 IGLV1-50A0A075B6I6 118 aa10.5□□□□□ -0.73
SMC4-204ENST00000462787 SMR3AQ99954 134 aa10.5□□□□□ -0.73
SMC4-204ENST00000462787 Q1T7F1 81 aa10.5□□□□□ -0.73
SMC4-204ENST00000462787 C7orf65Q6ZTY9 151 aa10.49□□□□□ -0.73
SMC4-204ENST00000462787 DNAH12Q6ZR08 3092 aa10.49□□□□□ -0.73
SMC4-204ENST00000462787 OCR1Q9BZK8 76 aa10.49□□□□□ -0.73
SMC4-204ENST00000462787 SPANXA2-OT1Q8N9U9 137 aa10.48□□□□□ -0.73
SMC4-204ENST00000462787 ANKRD11Q6UB99 2663 aaPredicted RBP10.48□□□□□ -0.73
SMC4-204ENST00000462787 LINC00612Q8N6U2 182 aa10.48□□□□□ -0.73
SMC4-204ENST00000462787 EPM2AB3EWF7 344 aa10.47□□□□□ -0.73
SMC4-204ENST00000462787 CYSTM1Q9H1C7 97 aa10.47□□□□□ -0.73
SMC4-204ENST00000462787 GIG44P09565 113 aaPredicted RBP10.46□□□□□ -0.73
SMC4-204ENST00000462787 C16orf90A8MZG2 172 aa10.46□□□□□ -0.74
SMC4-204ENST00000462787 IGFL1Q6UW32 110 aa10.46□□□□□ -0.74
SMC4-204ENST00000462787 NUPR2A6NF83 97 aa10.44□□□□□ -0.74
SMC4-204ENST00000462787 IGKV2D-30A0A075B6S6 120 aa10.44□□□□□ -0.74
SMC4-204ENST00000462787 IGKV2-30P06310 120 aa10.44□□□□□ -0.74
SMC4-204ENST00000462787 LCA10Q71F78 164 aa10.43□□□□□ -0.74
SMC4-204ENST00000462787 MRPL34Q9BQ48 92 aaKnown RBP10.42□□□□□ -0.74
SMC4-204ENST00000462787 A0A1W2PNM2 257 aa10.41□□□□□ -0.74
SMC4-204ENST00000462787 PHF5AQ7RTV0 110 aaKnown RBP10.41□□□□□ -0.74
SMC4-204ENST00000462787 FAM168BA1KXE4 195 aa10.41□□□□□ -0.74
SMC4-204ENST00000462787 PLA2G2DQ9UNK4 145 aa10.41□□□□□ -0.74
SMC4-204ENST00000462787 IGLV5-48A0A075B6I7 105 aa10.4□□□□□ -0.74
SMC4-204ENST00000462787 FP248Q71RG6 208 aaPredicted RBP10.4□□□□□ -0.74
SMC4-204ENST00000462787 A0A096LNT2 108 aa10.4□□□□□ -0.74
SMC4-204ENST00000462787 C15orf56Q8N910 161 aa10.4□□□□□ -0.74
SMC4-204ENST00000462787 DNAH10OSP0CZ25 163 aa10.4□□□□□ -0.75
SMC4-204ENST00000462787 IGLV5-52A0A0A0MRZ9 124 aa10.39□□□□□ -0.75
SMC4-204ENST00000462787 C19orf73Q9NVV2 129 aa10.39□□□□□ -0.75
SMC4-204ENST00000462787 CDC42SE1Q9NRR8 79 aa10.38□□□□□ -0.75
SMC4-204ENST00000462787 CHD8Q9HCK8 2581 aa10.38□□□□□ -0.75
SMC4-204ENST00000462787 UQCR11O14957 56 aa10.38□□□□□ -0.75
SMC4-204ENST00000462787 TLX1NBP0CAT3 122 aa10.36□□□□□ -0.75
SMC4-204ENST00000462787 ZNF462Q96JM2 2506 aa10.35□□□□□ -0.75
SMC4-204ENST00000462787 C8orf17Q9NRJ1 99 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms